Summary for ontology term: nanchang city prefecture

Number of annotations with term: 10

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__BacteriaTACGTAGGTCACGAGCGTTATCCGGAATTATTGGGCGTAAAGAGTGAGCAGGCGGCTTGGCAAGTCTGGGGTGAAAGAATGGGGCTCAACCCCATCCAGCCTTGGAAACTACCTGGCTAGAGTGCGCGAGAGGTTAACGGAACTCCATGT0.222222
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Prevotellaceae";g__PrevotellaTACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCACAGGCCGGCTGTCAAGCGTGTTGTGAAATGTAGGGGCTCAACCTCTGAACTGCAGCGCGAACTGACGGTCTTGAGTGCGCGCAACGTTGGCGGAATTCGTCG0.210526
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCAGCCGGGTCTGCAAGTCAGATGTGAAATCCGTGGGCTCAACCCACGAACTGCATTTGAAACTGTGGATCTTGAGTATCGGAGAGGTAATCGGAATTCCTTG0.200000
d__BacteriaTACGTAGGGGGCGAGCGTTGTTCGGAATCATTGGGCGTAAAGGGTGCGCAGGTGGCCCGACAAGTCTGGCGTTAAAGTGCGGGGCTCAACTCCGTGATGCGCTGGAAACTGTCTGGCTTGAGTACAGCAGGGGGCGTCGGAATTCCAGGT0.190476
d__Bacteria;p__"Bacteroidetes"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCAGGCTGCGAGGCAAGTCAGCGGTCAAATGTCGGGGCTCAACCCCGGCCTGCCGTTGAAACTGTTTTGCTAGAGTTCGAGTGAGGTATGCGGAATGCGTTGT0.190476
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae 2;g__AlkaliphilusTACGTAGGGGGCAAGCGTTATCCGGAATCATTGGGCGTAAAGGGTGCGTAGGCTGCCCTATAGGTCAGAGGTCAAAGGCTACGGCTCAACCGTAGTAAGCCTTTGAAACTGTAGGGCTTGAGTGCAGGAGAGGAGAGTGGAATTCCTAGT0.190476
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Prevotellaceae";g__PrevotellaTACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCACAGGCCGGCTGTCAAGCGTGTTGTGAAATGTAGGGGCTCAACCTCTGAACTGCAGCGCGAACTGACGGTCTTGAGTGCGCACAACGTTGGCGGAATTCGTCG0.190476
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__OscillibacterTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTAGCCGGGTGTGTAAGTCAGATGTGAAATCCGCGGGCTCAACCCGCGAACTGCATTTGAAACTGCGCATCTTGAGTATCGGAGAGGTAATCGGAATTCCTTG0.181818
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__OscillibacterTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTAGCCGGGTCGGCAAGTCAGATGTGAAATCTGGAGGCTCAACCTCCAAACTGCATTTGAAACTGTTGATCTTGAGTATCGGAGAGGTAACCGGAATTCCTTG0.181818
d__Bacteria;p__"Proteobacteria";c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__DesulfovibrioTACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGCACGTAGGCTGTCGTGTAAGTCAGGGGTGAAAGCCCACGGCTCAACCGTGGAATTGCCCTTGATACTGCATGACTGGAATCCGGGAGAGGGTAGTGGAATTCCAGG0.181818

Annotations:

common ontology terms
term enrichment score
TermScore
nanchang city prefecture0.800000
duroc pig0.444444
pancreatitis0.375000
acute pancreatitis0.375000
age 140 days0.363636
LOWER IN pancreatitis0.166667
LOWER IN acute pancreatitis0.166667
LOWER IN male organism0.125000
LOWER IN female organism0.111111
pig0.108108
sus scrofa0.108108
male organism0.083333
female organism0.071429
LOWER IN male0.064516
LOWER IN female0.058824
male0.037037
female0.025000
china0.020513
research facility0.011019
feces0.010390
control0.009788
LOWER IN control0.009709
adult0.009631
homo sapiens0.006160
Fraction of dbbact annotations with this term covered by the query
TermScore
nanchang city prefecture0.666667
LOWER IN pancreatitis0.500000
LOWER IN acute pancreatitis0.500000
pancreatitis0.500000
acute pancreatitis0.500000
duroc pig0.500000
age 140 days0.333333
LOWER IN male organism0.166667
LOWER IN female organism0.125000
male organism0.071429
pig0.062500
sus scrofa0.062500
female organism0.055556
LOWER IN male0.047619
LOWER IN female0.041667
male0.022727
female0.014286
china0.010363
research facility0.005587
feces0.005222
LOWER IN control0.005102
control0.004975
adult0.004854
homo sapiens0.003096
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
nanchang city prefecture1.000000
china1.000000
homo sapiens0.600000
adult0.600000
age 140 days0.400000
research facility0.400000
duroc pig0.400000
pig0.400000
sus scrofa0.400000
control0.300000
pancreatitis0.300000
acute pancreatitis0.300000
LOWER IN pancreatitis0.100000
LOWER IN acute pancreatitis0.100000
LOWER IN control0.100000
LOWER IN female0.100000
LOWER IN female organism0.100000
male organism0.100000
male0.100000
LOWER IN male organism0.100000
LOWER IN male0.100000
female0.100000
female organism0.100000
Number of experiments associating the term to the sequence
TermScore
feces2.000000
nanchang city prefecture2.000000
china2.000000
homo sapiens1.000000
adult1.000000
control1.000000
LOWER IN pancreatitis1.000000
LOWER IN acute pancreatitis1.000000
LOWER IN control1.000000
pancreatitis1.000000
acute pancreatitis1.000000
age 140 days1.000000
research facility1.000000
duroc pig1.000000
pig1.000000
sus scrofa1.000000
LOWER IN female1.000000
LOWER IN female organism1.000000
male organism1.000000
male1.000000
LOWER IN male organism1.000000
LOWER IN male1.000000
female1.000000
female organism1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
428amnondominant homo sapiens, adult, feces, nanchang city prefecture, pancreatitis, acute pancreatitis, china2018-12-09v41 / 17approvedNo
688amnondominant nanchang city prefecture, feces, age 140 days, research facility, duroc pig, china, pig, sus scrofa2028-03-09v41 / 17approvedNo
428amnondominant homo sapiens, adult, feces, nanchang city prefecture, control, china2018-12-09v41 / 18approvedNo
428amnoncommon homo sapiens, adult, feces, nanchang city prefecture, pancreatitis, acute pancreatitis, china2018-12-09v41 / 25approvedNo
688amnon high in male organism male compared to female female organism in nanchang city prefecture feces age 140 days research facility duroc pig china pig sus scrofa 2028-03-09v41 / 39approvedNo
428amnon high in pancreatitis acute pancreatitis compared to control in homo sapiens adult feces nanchang city prefecture china 2018-12-09v41 / 46approvedNo
428amnoncommon homo sapiens, adult, feces, nanchang city prefecture, control, china2018-12-09v41 / 93approvedNo
688amnon high in female female organism compared to male organism male in nanchang city prefecture feces age 140 days research facility duroc pig china pig sus scrofa 2028-03-09v41 / 239approvedNo
688amnoncommon nanchang city prefecture, feces, age 140 days, research facility, duroc pig, china, pig, sus scrofa2028-03-09v41 / 278approvedNo
428amnon high in control compared to pancreatitis acute pancreatitis in homo sapiens adult feces nanchang city prefecture china 2018-12-09v41 / 288approvedNo

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