Summary for ontology term: northeast region

Number of annotations with term: 222

Annotations:

common ontology terms
term enrichment score
TermScore
state of new york0.426141
commonwealth of pennsylvania0.299625
commonwealth of massachusetts0.206077
alabama0.201439
ultisol0.201439
state of rhode island0.195652
united states of america0.185041
auburn0.183007
estuary0.159091
agricultural field0.143590
upland soil0.125984
state of connecticut0.107660
foodon product type0.105960
adult0.103514
foot slope 0.097561
new york city0.097196
oral wash0.090909
long island sound0.090164
saline marsh0.086275
LOWER IN oral cavity0.082645
LOWER IN oral wash0.082645
homo sapiens0.081991
depth 0-5cm0.079422
oral cavity0.078431
sus scrofa0.075472
lung0.071429
pig0.070968
topsoil0.068536
surface water0.065217
captive0.065147
sea water0.062797
research facility0.061782
food (fermented)0.061224
saliva0.060698
sediment surface0.059322
bronchoalveolar lavage0.058741
feces0.058489
kimchi0.057613
adult organism0.055944
atlantic ocean0.055227
macaca fascicularis0.051282
cynomolgus macaque0.051282
state of maryland0.051282
coastal water0.051282
acute respiratory failure0.051282
mild disease course0.051282
state of new hampshire0.051282
wild0.050360
pregnancy0.050314
female organism0.050314
respiratory failure0.050000
charles river laboratories0.048780
cystic fibrosis0.047619
caribbean latino0.043103
rattus norvegicus0.042553
hospital0.042553
marine sediment0.041056
age 50-80 years0.040486
rat0.037736
c57bl/60.037037
depth 50-70cm0.034783
common reed0.034783
phragmites australis0.034783
sporobolus alterniflorus0.034783
smooth cordgrass0.034783
vaccinium macrocarpon0.034783
american cranberry0.034783
harvard forest0.034783
plant fluid0.034783
pitcher fluid0.034783
pitcher plant0.034783
sarracenia purpurea0.034783
cornell university0.034783
dorsum of tongue0.034783
chitin beads0.034783
flower0.034483
depth 25-50cm0.034188
sediment0.034063
spartina alterniflora0.033613
buccal mucosa0.033058
farm0.032310
mucus0.032000
rhizosphere0.031161
mouth mucosa0.031008
bird0.030534
control0.028269
caecum0.028169
depth 70-100cm0.026316
depth 50-90cm0.026316
saltmeadow cordgrass0.026316
sporobolus pumilus0.026316
hunts point0.026316
soundview0.026316
oyster reef0.026316
inflammatory bowel disease0.026316
late pregnancy0.026316
cheek pouch0.026316
gingiva0.026316
keratinized gingiva0.026316
every other day fasting0.026316
Fraction of dbbact annotations with this term covered by the query
TermScore
commonwealth of pennsylvania0.888889
commonwealth of massachusetts0.857143
state of new york0.700000
state of connecticut0.666667
depth 70-100cm0.500000
alabama0.500000
upland soil0.500000
ultisol0.500000
LOWER IN depth 50-70cm0.500000
depth 50-70cm0.500000
LOWER IN depth 70-100cm0.500000
foot slope 0.500000
depth 30-50cm0.500000
depth 50-90cm0.500000
depth 90-100cm0.500000
LOWER IN depth 50-90cm0.500000
LOWER IN depth 15-30cm0.500000
idiopathic pulmonary fibrosis0.500000
new york county0.500000
LOWER IN chronic fatigue syndrome0.500000
chronic fatigue syndrome0.500000
mealworm0.500000
tenebrio molitor0.500000
pet store0.500000
ginger0.500000
state of rhode island0.500000
red pepper0.500000
cabbage0.500000
fish sauce0.500000
food processing factory0.500000
miso food product0.500000
onion0.500000
radish0.500000
scallion0.500000
LOWER IN day 30.500000
days 1-90.500000
LOWER IN days 1-90.500000
vegan kimchi0.500000
vegan0.500000
LOWER IN non vegan kimchi0.500000
LOWER IN non vegan0.500000
non vegan0.500000
non vegan kimchi0.500000
LOWER IN vegan0.500000
LOWER IN vegan kimchi0.500000
common reed0.500000
phragmites australis0.500000
long island sound0.500000
estuary0.500000
saltmeadow cordgrass0.500000
sporobolus pumilus0.500000
sporobolus alterniflorus0.500000
smooth cordgrass0.500000
LOWER IN saltmeadow cordgrass0.500000
LOWER IN sporobolus pumilus0.500000
LOWER IN smooth cordgrass0.500000
LOWER IN sporobolus alterniflorus0.500000
LOWER IN spartina alterniflora0.500000
hunts point0.500000
LOWER IN soundview0.500000
LOWER IN oyster reef0.500000
sediment surface0.500000
soundview0.500000
oyster reef0.500000
LOWER IN hunts point0.500000
LOWER IN sediment surface0.500000
LOWER IN common reed0.500000
LOWER IN phragmites australis0.500000
vaccinium macrocarpon0.500000
american cranberry0.500000
harvard forest0.500000
plant fluid0.500000
pitcher fluid0.500000
pitcher plant0.500000
sarracenia purpurea0.500000
LOWER IN days 57-600.500000
days 0-30.500000
LOWER IN days 0-30.500000
days 57-600.500000
inflammatory bowel disease0.500000
LOWER IN inflammatory bowel disease0.500000
apple0.500000
malus x domestica0.500000
late pregnancy0.500000
LOWER IN multiple pregnancies0.500000
first pregnancy0.500000
cheek pouch0.500000
macaca fascicularis0.500000
cynomolgus macaque0.500000
cornell university0.500000
caribbean latino0.500000
gingiva0.500000
keratinized gingiva0.500000
state of maryland0.500000
LOWER IN every other day fasting0.500000
every other day fasting0.500000
skin of body0.500000
middle nasal meatus0.500000
nose0.500000
hard palate0.500000
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.855856
homo sapiens0.378378
adult0.342342
state of new york0.306306
feces0.256757
commonwealth of pennsylvania0.180180
alabama0.126126
auburn0.126126
ultisol0.126126
agricultural field0.126126
soil0.126126
state of rhode island0.121622
research facility0.117117
commonwealth of massachusetts0.117117
estuary0.094595
upland soil0.072072
foodon product type0.072072
state of connecticut0.058559
new york city0.058559
foot slope 0.054054
sus scrofa0.054054
oral cavity0.054054
oral wash0.054054
rhizosphere0.049550
long island sound0.049550
depth 0-5cm0.049550
topsoil0.049550
saline marsh0.049550
sea water0.049550
pig0.049550
saliva0.045045
captive0.045045
LOWER IN oral cavity0.045045
LOWER IN oral wash0.045045
lung0.040541
food (fermented)0.040541
surface water0.040541
control0.036036
pregnancy0.036036
adult organism0.036036
female organism0.036036
bronchoalveolar lavage0.031532
wild0.031532
kimchi0.031532
marine sediment0.031532
sediment0.031532
sediment surface0.031532
atlantic ocean0.031532
macaca fascicularis0.027027
cynomolgus macaque0.027027
mus musculus0.027027
mouse0.027027
caecum0.027027
c57bl/60.027027
charles river laboratories0.027027
state of maryland0.027027
rattus norvegicus0.027027
rat0.027027
water0.027027
coastal water0.027027
hospital0.027027
respiratory failure0.027027
acute respiratory failure0.027027
mild disease course0.027027
cystic fibrosis0.027027
state of new hampshire0.027027
farm0.022523
age 50-80 years0.022523
caribbean latino0.022523
depth 25-50cm0.018018
depth 50-70cm0.018018
common reed0.018018
phragmites australis0.018018
sporobolus alterniflorus0.018018
smooth cordgrass0.018018
spartina alterniflora0.018018
flower0.018018
vaccinium macrocarpon0.018018
american cranberry0.018018
harvard forest0.018018
plant fluid0.018018
pitcher fluid0.018018
pitcher plant0.018018
sarracenia purpurea0.018018
cornell university0.018018
mouth mucosa0.018018
buccal mucosa0.018018
dorsum of tongue0.018018
bird0.018018
chitin beads0.018018
mucus0.018018
depth 70-100cm0.013514
depth 10-25cm0.013514
depth 15-30cm0.013514
depth 50-90cm0.013514
european0.013514
caucasian0.013514
asian0.013514
LOWER IN control0.013514
late timepoints0.013514
Exp. ID User ID Description Date Region Flag Sequences
311amnonhighest in days 1-2 (middle) in kimchi fermentation ( high in days 1-2 compared to day 0 day 3 in united states of america state of rhode island kimchi food (fermented) )2018-04-09v4No1 / 1
311amnonlower in vegan compared to non-vegan kimchi ( high in non vegan non vegan kimchi compared to vegan vegan kimchi in united states of america state of rhode island kimchi food (fermented) )2018-04-09v4No1 / 1
784amnondominant common reed, phragmites australis, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 1
806amnon high in cigarette smoking nicotine dependence smoker compared to non-smoker in mouth mucosa buccal mucosa homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 1
592amnondominant united states of america, feces, commonwealth of pennsylvania, wild, sheep, ovis aries2020-02-18v1No1 / 2
311amnonhigher in vegan compared to non-vegan kimchi ( high in vegan kimchi vegan compared to non vegan kimchi non vegan in united states of america state of rhode island kimchi food (fermented) )2018-04-09v4No1 / 2
311amnondominant united states of america, state of rhode island, miso food product, food (fermented)2018-04-09v4No1 / 3
311amnondominant united states of america, state of rhode island, radish, foodon product type2018-04-09v4No1 / 3
311amnondominant united states of america, state of rhode island, kimchi, food (fermented)2018-04-09v4No1 / 3
784amnondominant sporobolus alterniflorus, smooth cordgrass, spartina alterniflora, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 3
803amnon high in control compared to type 2 diabetes mellitus in commonwealth of massachusetts age 50-80 years caribbean latino adult united states of america feces homo sapiens 2021-06-18v4No1 / 3
806amnon high in buccal mucosa mouth mucosa compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 3
311amnondominant ginger, united states of america, state of rhode island, foodon product type2018-04-09v4No1 / 4
311amnondominant united states of america, state of rhode island, red pepper, foodon product type2018-04-09v4No1 / 4
311amnondominant united states of america, state of rhode island, allium cepa, onion, foodon product type2018-04-09v4No1 / 4
823sheryoDominant at 0-15cm depth in foot slope ultisol soil in auburn, alabama (dominant foot slope , depth 0-15cm, alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 5
806amnon high in hard palate compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 5
592amnondominant feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 6
311amnonhigh freq. in salted cabbage (dominant cabbage, united states of america, state of rhode island, foodon product type)2018-04-09v4No1 / 6
311amnondominant united states of america, state of rhode island, garlic, foodon product type2018-04-09v4No1 / 6
311amnonhigher in fermneted kimchi days>1 compared to day 0 ( high in late timepoints days 1-9 compared to day 0 early timepoints in united states of america state of rhode island kimchi food (fermented) )2018-04-09v4No1 / 6
646amnondominant protected brush sampling, lung, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 6
823sheryoDominant at 15-30cm depth in foot slope ultisol soil in auburn, alabama (dominant depth 15-30cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 7
806amnon high in oral wash oral cavity compared to saliva in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 7
646amnoncommon lung, bronchoalveolar lavage, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 7
592amnondominant united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v1No1 / 8
722amnondominant estuary, marine sediment, sediment, united states of america, state of new york, new york city, sediment surface, hunts point2021-01-02v4No1 / 8
722amnondominant estuary, marine sediment, sediment, united states of america, state of new york, new york city, sediment surface, oyster reef, soundview2021-01-02v4No1 / 8
646amnondominant lung, bronchoalveolar lavage, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 8
823sheryoDominant at 0-10cm depth in ultisol soil in auburn, alabama (dominant depth 0-10cm, auburn, alabama, upland soil, agricultural field, ultisol, soil)2021-08-07v3No1 / 9
626amnoncommon red-tailed hawk, buteo jamaicensis, commonwealth of massachusetts, united states of america, captive, bird, feces2020-05-16v1No1 / 9
823sheryoDominant at 30-50cm depth in foot slope ultisol soil in auburn, alabama (dominant depth 30-50cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 10
311amnonhigh freq. in floor of kimchi production facility (dominant united states of america, state of rhode island, floor, food processing factory)2018-04-09v4No1 / 10
544amnondominant vaccinium macrocarpon, american cranberry, united states of america, commonwealth of massachusetts, botanical fruit food product2019-08-04v4No1 / 10
806amnon high in dentition supragingival plaque supragingival dental plaque compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 10
646amnoncommon protected brush sampling, lung, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 10
311amnondominant united states of america, state of rhode island, fish sauce, foodon product type2018-04-09v4No1 / 11
544amnondominant flower, vaccinium macrocarpon, american cranberry, united states of america, commonwealth of massachusetts2019-08-04v4No1 / 11
823sheryoDominant at 10-25cm depth in ultisol soil in auburn, alabama (dominant depth 10-25cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 11
806amnon high in palatine tonsil compared to oral wash oral cavity in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 11
806amnondominant gingiva, keratinized gingiva, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 12
684amnondominant middle nasal meatus, nasal cavity, nasal cavity mucosa, nose, commonwealth of pennsylvania, united states of america, adult, homo sapiens2028-03-05v1No1 / 12
806amnon high in saliva compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 12
817amnondominant bronchoalveolar lavage, lung, united states of america, commonwealth of pennsylvania, captive, research facility, macaca fascicularis, cynomolgus macaque2021-07-08v4No1 / 12
806amnondominant oral cavity, mouth, oral wash, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 13
461amnondominant water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 13
636amnoncommon hospital, commonwealth of pennsylvania, united states of america, trachea, tracheal aspirate, endotracheal aspirate, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 13
469amnondominant homo sapiens, adult, united states of america, state of new york, bronchoalveolar lavage, lung, idiopathic pulmonary fibrosis2019-01-14v4No1 / 14
311amnondominant united states of america, state of rhode island, scallion, foodon product type2018-04-09v4No1 / 14
684amnoncommon middle nasal meatus, nasal cavity, nasal cavity mucosa, nose, commonwealth of pennsylvania, united states of america, adult, homo sapiens2028-03-05v1No1 / 14
626amnoncommon strix varia, barred owl, commonwealth of massachusetts, united states of america, captive, bird, feces2020-05-16v1No1 / 14
646amnondominant adult, sputum, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 14
802amnondominant cornell university, state of new york, united states of america, adult, saliva, homo sapiens2021-06-16v4No1 / 15
806amnondominant dentition, supragingival plaque, supragingival dental plaque, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 15
806amnondominant dorsum of tongue, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 15
493amnondominant homo sapiens, adult, saliva, united states of america, state of new york2019-02-27v4No1 / 16
395amnonhigher in kids with ibd compared to healthy donors ( high in child ulcerative colitis inflammatory bowel disease crohn's disease compared to control in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 16
343amnonhigh freq. in apple flowers (dominant apple, malus x domestica, flower structure, flower, united states of america, state of connecticut)2018-05-28v4No1 / 16
816amnondominant late pregnancy, commonwealth of pennsylvania, pregnancy, feces, adult organism, research facility, united states of america, female organism, sus scrofa, pig2021-07-04v4No1 / 16
823sheryoDominant at 50-90cm depth in foot slope ultisol soil in auburn, alabama (dominant depth 50-90cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 17
311amnoncommon united states of america, state of rhode island, kimchi, food (fermented)2018-04-09v4No1 / 17
806amnon high in dorsum of tongue compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 17
759amnondominant state of new york, new york city, wild, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 17
816amnondominant early pregnancy, commonwealth of pennsylvania, pregnancy, feces, adult organism, research facility, united states of america, female organism, sus scrofa, pig2021-07-04v4No1 / 17
636amnoncommon oropharynx, oropharyngeal swab, hospital, commonwealth of pennsylvania, united states of america, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 17
823sheryoDominant at 90-100cm depth in foot slope ultisol soil in auburn, alabama (dominant depth 90-100cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 18
650amnondominant asian, state of new york, united states of america, homo sapiens, adult, feces2020-09-09v4No1 / 18
12amnon high in chronic fatigue syndrome compared to control in homo sapiens feces new york county 2016-11-02v4No1 / 18
817amnondominant united states of america, cheek pouch, oral cavity, saliva, oral wash, commonwealth of pennsylvania, captive, research facility, macaca fascicularis, cynomolgus macaque2021-07-07v4No1 / 18
806amnondominant homo sapiens, adult, pair of nares, external naris, state of new york, united states of america2021-06-19v3No1 / 18
623amnoncommon skin of body, skin, homo sapiens, umbilicus, united states of america, adult, commonwealth of pennsylvania2020-05-10v3No1 / 18
806amnondominant mouth mucosa, buccal mucosa, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 18
806amnondominant hard palate, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 18
636amnon high in tracheal aspirate endotracheal aspirate trachea compared to oropharynx oropharyngeal swab in hospital commonwealth of pennsylvania united states of america respiratory failure acute respiratory failure adult homo sapiens 2020-08-08v4No1 / 18
823sheryoDopminant at 25-50cm depth in ultisol soil in auburn, alabama (dominant depth 25-50cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 18
803amnondominant type 2 diabetes mellitus, commonwealth of massachusetts, age 50-80 years, caribbean latino, adult, united states of america, feces, homo sapiens2021-06-18v4No1 / 19
806amnondominant palatine tonsil, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 19
573amnondominant feces, canis lupus familiaris, dog, united states of america, commonwealth of pennsylvania, juvenile stage2019-12-22v4No1 / 19
650amnondominant state of new york, european, caucasian, united states of america, homo sapiens, adult, feces2020-09-09v4No1 / 20
592amnondominant digestive system, mealworm, tenebrio molitor, commonwealth of pennsylvania, pet store, united states of america2020-02-18v1No1 / 20
722amnondominant estuary, united states of america, state of new york, new york city, sea water, surface water2021-01-02v4No1 / 20
614amnonincreases in picher plant fluid grown in lab ( high in research facility days 57-60 late time points compared to wild days 0-3 early time points in harvard forest plant fluid pitcher fluid united states of america commonwealth of massachusetts pitcher plant sarracenia purpurea )2020-04-26v4No1 / 20
803amnondominant control, commonwealth of massachusetts, age 50-80 years, caribbean latino, adult, united states of america, feces, homo sapiens2021-06-18v4No1 / 20
823sheryoDominant at 50-70cm depth in ultisol soil in auburn, alabama (dominant depth 50-70cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 20
614amnondominant harvard forest, plant fluid, pitcher fluid, united states of america, commonwealth of massachusetts, pitcher plant, sarracenia purpurea2020-04-26v4No1 / 21
806amnondominant saliva, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 21
759amnondominant state of vermont, farm, pig, united states of america, feces, sus scrofa2021-04-04v4No1 / 21
626amnondominant red-tailed hawk, buteo jamaicensis, commonwealth of massachusetts, united states of america, captive, bird, feces2020-05-16v1No1 / 21
759amnondominant city of boston, commonwealth of massachusetts, research facility, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 21
650amnondominant african american, state of new york, united states of america, homo sapiens, adult, feces2020-09-09v4No1 / 22
311amnoncommon united states of america, state of rhode island, miso food product, food (fermented)2018-04-09v4No1 / 22
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v4No1 / 22
806amnoncommon gingiva, keratinized gingiva, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 22
823sheryoDominant at 70-100cm depth in ultisol soil in auburn, alabama (dominant depth 70-100cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 23
623amnondominant skin of body, skin, homo sapiens, umbilicus, united states of america, adult, commonwealth of pennsylvania2020-05-10v3No1 / 23
626amnondominant strix varia, barred owl, commonwealth of massachusetts, united states of america, captive, bird, feces2020-05-16v1No1 / 23
636amnondominant hospital, commonwealth of pennsylvania, united states of america, trachea, tracheal aspirate, endotracheal aspirate, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 23
636amnondominant oropharynx, oropharyngeal swab, hospital, commonwealth of pennsylvania, united states of america, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 23
469amnoncommon homo sapiens, adult, united states of america, state of new york, bronchoalveolar lavage, lung, idiopathic pulmonary fibrosis2019-01-14v4No1 / 24
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, control2018-11-14v4No1 / 24
447amnondominant mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland2019-01-08v4No1 / 24
447amnondominant mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland, fasting, every other day fasting2019-01-08v4No1 / 24
544amnoncommon flower, vaccinium macrocarpon, american cranberry, united states of america, commonwealth of massachusetts2019-08-04v4No1 / 25
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, ulcerative colitis, inflammatory bowel disease, crohn's disease2018-11-14v4No1 / 25
311amnoncommon united states of america, state of rhode island, allium cepa, onion, foodon product type2018-04-09v4No1 / 26
614amnoncommon harvard forest, plant fluid, pitcher fluid, united states of america, commonwealth of massachusetts, pitcher plant, sarracenia purpurea2020-04-26v4No1 / 26
650amnonpositively correlated with BMI ( high in high bmi body mass index compared to low bmi in feces adult homo sapiens united states of america state of new york )2020-09-09v4No1 / 26
802amnondominant feces, cornell university, state of new york, united states of america, adult, homo sapiens2021-06-16v4No1 / 26
806amnon high in gingiva keratinized gingiva compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 28
817amnoncommon bronchoalveolar lavage, lung, united states of america, commonwealth of pennsylvania, captive, research facility, macaca fascicularis, cynomolgus macaque2021-07-08v4No1 / 28
806amnoncommon dorsum of tongue, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 29
817amnon high in bronchoalveolar lavage lung compared to saliva oral wash cheek pouch oral cavity in united states of america commonwealth of pennsylvania captive research facility macaca fascicularis cynomolgus macaque 2021-07-08v4No1 / 29
573amnoncommon feces, canis lupus familiaris, dog, united states of america, commonwealth of pennsylvania, juvenile stage2019-12-22v4No1 / 30
544amnoncommon vaccinium macrocarpon, american cranberry, united states of america, commonwealth of massachusetts, botanical fruit food product2019-08-04v4No1 / 31
806amnoncommon hard palate, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 31
806amnon high in pair of nares external naris compared to oral cavity oral wash in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 32
646amnoncommon adult, sputum, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 33
311amnoncommon united states of america, state of rhode island, garlic, foodon product type2018-04-09v4No1 / 34
12amnon high in control compared to chronic fatigue syndrome in homo sapiens feces new york county 2016-11-02v4No1 / 35
311amnoncommon united states of america, state of rhode island, radish, foodon product type2018-04-09v4No1 / 36
806amnoncommon homo sapiens, adult, pair of nares, external naris, state of new york, united states of america2021-06-19v3No1 / 38
823sheryoHigher in 70-100cm depth compared to 50-70cm depth in ultisol soil in auburn, alabama ( high in depth 70-100cm compared to depth 50-70cm in alabama auburn upland soil ultisol agricultural field soil )2021-08-08v3No1 / 39
806amnoncommon mouth mucosa, buccal mucosa, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 40
806amnoncommon dentition, supragingival plaque, supragingival dental plaque, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 41
614amnondecreases in picher plant fluid grown in lab ( high in wild early time points days 0-3 compared to research facility late time points days 57-60 in harvard forest plant fluid pitcher fluid united states of america commonwealth of massachusetts pitcher plant sarracenia purpurea )2020-04-26v4No1 / 42
806amnoncommon palatine tonsil, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 48
806amnon high in oral wash oral cavity compared to hard palate in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 48
650amnoncommon african american, state of new york, united states of america, homo sapiens, adult, feces2020-09-09v4No1 / 52
650amnoncommon state of new york, european, caucasian, united states of america, homo sapiens, adult, feces2020-09-09v4No1 / 56
817amnon high in oral cavity cheek pouch oral wash saliva compared to bronchoalveolar lavage lung in united states of america commonwealth of pennsylvania captive research facility macaca fascicularis cynomolgus macaque 2021-07-08v4No1 / 56
650amnon high in female compared to male in feces adult homo sapiens united states of america state of new york 2020-09-10v4No1 / 57
806amnon high in oral wash oral cavity compared to buccal mucosa mouth mucosa in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 57
806amnon high in oral wash oral cavity compared to supragingival plaque supragingival dental plaque dentition in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 58
311amnonlower in fermneted kimchi days>1 compared to day 0 ( high in day 0 early timepoints compared to days 1-9 in united states of america state of rhode island kimchi food (fermented) )2018-04-09v4No1 / 62
311amnoncommon united states of america, state of rhode island, red pepper, foodon product type2018-04-09v4No1 / 63
650amnoncommon asian, state of new york, united states of america, homo sapiens, adult, feces2020-09-09v4No1 / 66
311amnoncommon united states of america, state of rhode island, fish sauce, foodon product type2018-04-09v4No1 / 68
803amnoncommon type 2 diabetes mellitus, commonwealth of massachusetts, age 50-80 years, caribbean latino, adult, united states of america, feces, homo sapiens2021-06-18v4No1 / 70
817amnoncommon united states of america, cheek pouch, oral cavity, saliva, oral wash, commonwealth of pennsylvania, captive, research facility, macaca fascicularis, cynomolgus macaque2021-07-07v4No1 / 72
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, control2018-11-14v4No1 / 75
650amnonnegatively correlated with BMI ( high in low bmi compared to body mass index high bmi in state of new york united states of america homo sapiens adult feces )2020-09-09v4No1 / 75
650amnon high in male compared to female in feces adult homo sapiens united states of america state of new york 2020-09-10v4No1 / 82
816amnon high in early pregnancy compared to late pregnancy in commonwealth of pennsylvania pregnancy feces adult organism research facility united states of america female organism sus scrofa pig 2021-07-04v4No1 / 83
592amnoncommon digestive system, mealworm, tenebrio molitor, commonwealth of pennsylvania, pet store, united states of america2020-02-18v1No1 / 84
311amnoncommon in salted cabbage (common cabbage, united states of america, state of rhode island, foodon product type)2018-04-09v4No1 / 85
802amnoncommon cornell university, state of new york, united states of america, adult, saliva, homo sapiens2021-06-16v4No1 / 85
806amnoncommon oral cavity, mouth, oral wash, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 86
806amnon high in oral wash oral cavity compared to palatine tonsil in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 87
803amnoncommon control, commonwealth of massachusetts, age 50-80 years, caribbean latino, adult, united states of america, feces, homo sapiens2021-06-18v4No1 / 89
447amnonlower in mice with evert other day fasting compared to controls ( high in control compared to fasting every other day fasting in mus musculus mouse caecum c57bl/6 research facility charles river laboratories united states of america state of maryland )2019-01-08v4No1 / 92
759amnoncommon state of new york, new york city, wild, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 94
759amnon high in wild new york city state of new york compared to research facility city of boston commonwealth of massachusetts in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 96
493amnoncommon homo sapiens, adult, saliva, united states of america, state of new york2019-02-27v4No1 / 104
447amnonhigher in mice with evert other day fasting compared to controls ( high in fasting every other day fasting compared to control in mus musculus mouse caecum c57bl/6 research facility charles river laboratories united states of america state of maryland )2019-01-08v4No1 / 106
806amnoncommon saliva, homo sapiens, adult, state of new york, united states of america2021-06-19v3No1 / 106
395amnonlower in kids with ibd compared to healthy donors ( high in control compared to child ulcerative colitis inflammatory bowel disease crohn's disease in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 107
802amnoncommon feces, cornell university, state of new york, united states of america, adult, homo sapiens2021-06-16v4No1 / 108
461amnonearly colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, middle timepoints, sea water)2019-01-12v4No1 / 108
343amnoncommon in apple flowers (common apple, malus x domestica, flower structure, flower, united states of america, state of connecticut)2018-05-28v4No1 / 118
461amnonlate colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, late timepoints, sea water)2019-01-12v4No1 / 120
311amnoncommon united states of america, state of rhode island, scallion, foodon product type2018-04-09v4No1 / 121
636amnon high in oropharynx oropharyngeal swab compared to trachea endotracheal aspirate tracheal aspirate in hospital commonwealth of pennsylvania united states of america respiratory failure acute respiratory failure adult homo sapiens 2020-08-08v4No1 / 122
806amnon high in dorsum of tongue compared to oral wash oral cavity in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 126
823sheryoHigher in 50-70cm depth compared to 70-100cm depth in ultisol soil in auburn, alabama ( high in depth 50-70cm compared to depth 70-100cm in alabama auburn upland soil ultisol agricultural field soil )2021-08-08v3No1 / 127
823sheryoHigher in 50-70cm depth compared to 25-50cm depth in ultisol soil in auburn, alabama ( high in depth 50-70cm compared to depth 25-50cm in alabama auburn upland soil ultisol agricultural field soil )2021-08-07v3No1 / 135
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 141
209amnon high in pacific ocean vancouver compared to atlantic ocean cape cod canal in sea water ocean north america depth 25cm 2017-10-15v4No1 / 144
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 160
823sheryoHigher in 25-50cm depth compared to 50-70cm depth in ultisol soil in auburn, alabama ( high in depth 25-50cm compared to depth 50-70cm in alabama auburn upland soil ultisol agricultural field soil )2021-08-07v3No1 / 161
209amnon high in cape cod canal atlantic ocean compared to vancouver pacific ocean in sea water ocean north america depth 25cm 2017-10-15v4No1 / 166
806amnon high in oral wash oral cavity compared to pair of nares external naris in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 178
759amnoncommon city of boston, commonwealth of massachusetts, research facility, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 179
311amnoncommon ginger, united states of america, state of rhode island, foodon product type2018-04-09v4No1 / 180
592amnoncommon united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v1No1 / 196
784amnoncommon common reed, phragmites australis, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 204
759amnon high in commonwealth of massachusetts city of boston research facility compared to wild state of new york new york city in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 217
759amnon high in state of vermont farm pig compared to state of alabama wild wild boar in united states of america feces sus scrofa 2021-04-04v4No1 / 258
784amnon high in common reed phragmites australis compared to saltmeadow cordgrass sporobolus pumilus in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 267
759amnon high in state of alabama wild wild boar compared to state of vermont farm pig in united states of america feces sus scrofa 2021-04-04v4No1 / 268
784amnon high in saltmeadow cordgrass sporobolus pumilus compared to smooth cordgrass sporobolus alterniflorus spartina alterniflora in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 277
823sheryoHigher in 25-50cm depth compared to 10-25cm depth in ultisol soil in auburn, alabama ( high in depth 25-50cm compared to depth 10-25cm in alabama auburn upland soil ultisol agricultural field soil )2021-08-07v3No1 / 283
806amnon high in oral wash oral cavity compared to keratinized gingiva gingiva in homo sapiens adult state of new york united states of america 2021-06-19v3No1 / 288
722amnoncommon estuary, united states of america, state of new york, new york city, sea water, surface water2021-01-02v4No1 / 301
816amnon high in late pregnancy compared to early pregnancy in commonwealth of pennsylvania pregnancy feces adult organism research facility united states of america female organism sus scrofa pig 2021-07-04v4No1 / 312
816amnoncommon early pregnancy, commonwealth of pennsylvania, pregnancy, feces, adult organism, research facility, united states of america, female organism, sus scrofa, pig2021-07-04v4No1 / 313
650amnon high in asian compared to caucasian european in feces adult homo sapiens united states of america state of new york 2020-09-12v4No1 / 317
461amnoncommon water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 322
311amnoncommon in floor of kimchi production facility (common united states of america, state of rhode island, floor, food processing factory)2018-04-09v4No1 / 324
447amnoncommon mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland, fasting, every other day fasting2019-01-08v4No1 / 328
759amnoncommon state of vermont, farm, pig, united states of america, feces, sus scrofa2021-04-04v4No1 / 328
816amnoncommon late pregnancy, commonwealth of pennsylvania, pregnancy, feces, adult organism, research facility, united states of america, female organism, sus scrofa, pig2021-07-04v4No1 / 340
447amnoncommon mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland2019-01-08v4No1 / 343
816amnonhigher in sows in first pregnancy compared to later pregnancies ( high in first pregnancy compared to multiple pregnancies in commonwealth of pennsylvania pregnancy feces adult organism research facility united states of america female organism sus scrofa pig )2021-07-04v4No1 / 374
784amnon high in smooth cordgrass spartina alterniflora sporobolus alterniflorus compared to saltmeadow cordgrass sporobolus pumilus in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 380
784amnoncommon saltmeadow cordgrass, sporobolus pumilus, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 382
722amnon high in surface water sea water compared to sediment surface marine sediment sediment in estuary new york city state of new york united states of america 2021-01-02v4No1 / 399
823sheryoHigher in 10-25cm depth compared to 25-50cm depth in ultisol soil in auburn, alabama ( high in depth 10-25cm compared to depth 25-50cm in alabama auburn upland soil ultisol agricultural field soil )2021-08-07v3No1 / 455
823sheryoCommon at 70-100cm depth in ultisol soil in auburn, alabama (common depth 70-100cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 459
722amnon high in soundview oyster reef compared to hunts point in estuary marine sediment sediment united states of america state of new york new york city sediment surface 2021-01-02v4No1 / 469
650amnon high in european caucasian compared to asian in feces adult homo sapiens united states of america state of new york 2020-09-12v4No1 / 475
784amnoncommon sporobolus alterniflorus, smooth cordgrass, spartina alterniflora, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 511
823sheryoHigher at 50-90cm depth compared to 15-30cm depth in foot slope ultisol soil in auburn, alabama ( high in depth 50-90cm compared to depth 15-30cm in foot slope alabama auburn ultisol agricultural field soil )2021-08-08v3No1 / 539
784amnon high in saltmeadow cordgrass sporobolus pumilus compared to common reed phragmites australis in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 581
823sheryoCommon at 50-70cm depth in ultisol soil in auburn, alabama (common depth 50-70cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 620
592amnoncommon feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 633
823sheryoCommon at 25-50cm depth in ultisol soil in auburn, alabama (common depth 25-50cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 652
722amnon high in hunts point compared to soundview oyster reef in estuary marine sediment sediment united states of america state of new york new york city sediment surface 2021-01-02v4No1 / 696
823sheryoCommon at 0-10cm depth in ultisol soil in auburn, alabama (common depth 0-10cm, auburn, alabama, upland soil, agricultural field, ultisol, soil)2021-08-07v3No1 / 730
823sheryoCommon at 10-25cm depth in ultisol soil in auburn, alabama (common depth 10-25cm, alabama, auburn, upland soil, ultisol, agricultural field, soil)2021-08-07v3No1 / 732
823sheryoCommon at 30-50cm depth in foot slope ultisol soil in auburn, alabama (common depth 30-50cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 753
816amnonlower in sows in first pregnancy compared to later pregnancies ( high in multiple pregnancies compared to first pregnancy in commonwealth of pennsylvania pregnancy feces adult organism research facility united states of america female organism sus scrofa pig )2021-07-04v4No1 / 780
823sheryoCommon at 90-100cm depth in foot slope ultisol soil in auburn, alabama (common depth 90-100cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 782
823sheryoCommon at 50-90cm depth in foot slope ultisol soil in auburn, alabama (common depth 50-90cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 815
592amnoncommon united states of america, feces, commonwealth of pennsylvania, wild, sheep, ovis aries2020-02-18v1No1 / 828
784amnon high in common reed phragmites australis compared to smooth cordgrass spartina alterniflora sporobolus alterniflorus in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 918
722amnoncommon estuary, marine sediment, sediment, united states of america, state of new york, new york city, sediment surface, oyster reef, soundview2021-01-02v4No1 / 922
823sheryoHigher at 15-30cm depth compared to 50-90cm depth in foot slope ultisol soil in auburn, alabama ( high in depth 15-30cm compared to depth 50-90cm in foot slope alabama auburn ultisol agricultural field soil )2021-08-08v3No1 / 968
722amnoncommon estuary, marine sediment, sediment, united states of america, state of new york, new york city, sediment surface, hunts point2021-01-02v4No1 / 1001
823sheryoCommon at 0-15cm depth in foot slope ultisol soil in auburn, alabama (common foot slope , depth 0-15cm, alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 1199
823sheryoCommon at 15-30cm depth in foot slope ultisol soil in auburn, alabama (common depth 15-30cm, foot slope , alabama, auburn, ultisol, agricultural field, soil)2021-08-08v3No1 / 1218
784amnon high in smooth cordgrass sporobolus alterniflorus spartina alterniflora compared to common reed phragmites australis in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 1421
722amnon high in sediment marine sediment sediment surface compared to sea water surface water in estuary united states of america state of new york new york city 2021-01-02v4No1 / 1736

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