Summary for ontology term: organ part

Number of annotations with term: 232

Annotations:

common ontology terms
term enrichment score
TermScore
caecum0.655738
research facility0.243084
rumen0.232694
colon0.231924
mus musculus0.216596
mouse0.198325
gallus gallus0.185430
chicken0.185430
farm0.164900
c57bl/60.139905
right colon0.134255
midgut0.134255
ovis aries0.132039
united states of america0.125458
texas0.118421
rat0.108108
LOWER IN caecum0.105423
free range chicken0.100775
bos taurus0.100478
kingdom of spain0.097345
age 8 weeks0.096000
china0.093985
ireland0.093750
mucosa0.089189
rattus norvegicus0.087591
LOWER IN colon0.079818
digestive system0.078212
biopsy0.077821
sweden0.077320
sprague dawley0.074906
australia0.074534
sus scrofa0.072202
pig0.072202
bolivia0.072000
rectum0.071358
LOWER IN control0.070219
broiler chicken0.069498
control0.066532
hindgut0.065934
rex rabbit0.065574
charles river laboratories0.065574
mouth mucosa0.065574
oryctolagus cuniculus0.064516
holstein-friesian bull0.064516
child0.063091
mouth0.061644
left colon0.058011
omasum0.057732
age 30 days0.056911
dairy0.056911
wild0.056818
LOWER IN feces0.056112
sinusoidal space0.055336
paranasal sinus0.055336
feces0.054666
canada0.053763
homo sapiens0.051823
diet0.051423
female0.051020
LOWER IN right colon0.050104
ruminant reticulum0.049793
gastrointestinal system0.049180
gastrointestinal system mucosa0.049180
cecal content0.049180
siganidae0.049180
rabbitfish0.049180
gryllinae0.049180
field cricket0.049180
sheep0.049180
bumble bee0.049180
queen0.049180
state of maryland0.049180
fasting0.049180
nile tilapia0.049180
coturnix coturnix0.049180
common quail0.049180
ovariectomy0.049180
age 38 weeks0.049180
chuquisaca department0.049180
age 5-13 years0.049180
tibet autonomous region0.048000
bombus terrestris0.048000
oreochromis niloticus0.048000
italy0.047458
united kingdom0.047458
rainbow trout0.046875
oncorhynchus mykiss0.046875
switzerland0.046875
biopsy site0.046875
obsolete_juvenile stage0.046358
sichuan province0.044776
belgium0.044776
brazil0.043796
rural community0.043796
LOWER IN left colon0.041899
bos grunniens0.041754
ileum0.041322
c57bl/6j0.041096
fish0.040268
taconic farms0.039683
Fraction of dbbact annotations with this term covered by the query
TermScore
caecum0.952381
rumen0.900000
LOWER IN caecum0.888889
LOWER IN right colon0.800000
right colon0.800000
midgut0.800000
mucosa0.750000
LOWER IN ruminant reticulum0.750000
LOWER IN omasum0.750000
LOWER IN left colon0.750000
left colon0.750000
hindgut0.750000
ovis aries0.666667
ruminant reticulum0.666667
omasum0.666667
LOWER IN rumen0.666667
jejunum0.666667
LOWER IN jejunum0.666667
LOWER IN hindgut0.666667
rex rabbit0.666667
age 8 weeks0.666667
bos grunniens0.666667
LOWER IN mucosa0.666667
charles river laboratories0.666667
mouth mucosa0.666667
LOWER IN stomach0.571429
colon0.555556
LOWER IN colon0.538462
age 30 days0.500000
dairy0.500000
LOWER IN sinusitis0.500000
cystic fibrosis0.500000
LOWER IN rectum0.500000
upper respiratory tract0.500000
gastrointestinal system0.500000
esophagus0.500000
ileum0.500000
LOWER IN esophagus0.500000
LOWER IN ileum0.500000
LOWER IN transverse colon0.500000
transverse colon0.500000
liolaemus ruibali0.500000
small intestine0.500000
LOWER IN small intestine0.500000
sigmoid colon0.500000
children0.500000
oryctolagus cuniculus0.500000
gastrointestinal system mucosa0.500000
cold temperature habitat0.500000
12c0.500000
LOWER IN warm temperature habitat0.500000
LOWER IN 18c0.500000
warm termpterature habitat0.500000
18c0.500000
LOWER IN cold temperature habitat0.500000
LOWER IN 12c0.500000
warm temperature habitat0.500000
cecal content0.500000
LOWER IN tibetan pig0.500000
LOWER IN tibetan swine0.500000
tibetan pig0.500000
tibetan swine0.500000
LOWER IN sus scrofa0.500000
LOWER IN pig0.500000
siganidae0.500000
rabbitfish0.500000
LOWER IN midgut0.500000
bolivia0.500000
LOWER IN ecuador0.500000
gryllinae0.500000
field cricket0.500000
chemically defined diet0.500000
LOWER IN cat chow0.500000
cat chow0.500000
LOWER IN chemically defined diet0.500000
LOWER IN bolivia0.500000
intestinal contents0.500000
LOWER IN intestinal contents0.500000
sheep0.500000
lamb0.500000
ireland0.500000
age 100 days0.500000
linseed oil0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
LOWER IN digestive tract0.500000
digestive tract0.500000
colonic mucosa0.500000
LOWER IN colonic lumen0.500000
colonic lumen0.500000
Fraction of annotations for the query sequences containing the term
TermScore
caecum0.500000
research facility0.396552
united states of america0.331897
mus musculus0.241379
mouse0.215517
farm0.150862
colon0.146552
rumen0.133621
gallus gallus0.120690
chicken0.120690
homo sapiens0.116379
china0.107759
c57bl/60.094828
kingdom of spain0.094828
feces0.081897
texas0.077586
ovis aries0.073276
right colon0.073276
midgut0.073276
rat0.068966
digestive system0.060345
bos taurus0.060345
LOWER IN control0.056034
LOWER IN caecum0.056034
free range chicken0.056034
control0.051724
age 8 weeks0.051724
australia0.051724
ireland0.051724
rattus norvegicus0.051724
mucosa0.047414
LOWER IN colon0.043103
biopsy0.043103
canada0.043103
sweden0.043103
sus scrofa0.043103
pig0.043103
wild0.043103
child0.043103
sprague dawley0.043103
female0.043103
rectum0.038793
mouth0.038793
bolivia0.038793
broiler chicken0.038793
hindgut0.034483
oryctolagus cuniculus0.034483
rex rabbit0.034483
holstein-friesian bull0.034483
adult0.034483
charles river laboratories0.034483
mouth mucosa0.034483
age 30 days0.030172
obsolete_juvenile stage0.030172
italy0.030172
dairy0.030172
omasum0.030172
sinusoidal space0.030172
paranasal sinus0.030172
LOWER IN feces0.030172
left colon0.030172
diet0.030172
united kingdom0.030172
ruminant reticulum0.025862
gastrointestinal system0.025862
LOWER IN right colon0.025862
sichuan province0.025862
fish0.025862
rainbow trout0.025862
oncorhynchus mykiss0.025862
gastrointestinal system mucosa0.025862
cecal content0.025862
tibet autonomous region0.025862
siganidae0.025862
rabbitfish0.025862
gryllinae0.025862
field cricket0.025862
sheep0.025862
brazil0.025862
bombus terrestris0.025862
bumble bee0.025862
queen0.025862
belgium0.025862
switzerland0.025862
state of maryland0.025862
fasting0.025862
oreochromis niloticus0.025862
nile tilapia0.025862
coturnix coturnix0.025862
common quail0.025862
ovariectomy0.025862
age 38 weeks0.025862
chuquisaca department0.025862
rural community0.025862
age 5-13 years0.025862
c57bl/6j0.025862
biopsy site0.025862
ileum0.021552
LOWER IN left colon0.021552
taconic farms0.021552
Exp. ID User ID Description Date Region Flag Sequences
228amnonhigh in sinus brush of CF patients compared to other sinusitis ( high in cystic fibrosis compared to sinusitis in homo sapiens mucosa sinusoidal space paranasal sinus united states of america )2017-10-31v4No1 / 1
230amnonhighfreq mouse, mus musculus, research facility, united states of america, upper respiratory tract2017-11-02v4No1 / 1
14amnonhighest in the right colon ( high in right colon compared to caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 1
14amnonmuch higher in right and transverse colon compared to other GI tract ( high in right colon transverse colon compared to left colon caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 1
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 1
434amnon high in control diet compared to fructose diet fructose in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 1
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 1
124amnonhigher in interferon gamma knockout mice ( high in interferon gamma knockout compared to control united states of america in mus musculus mouse caecum feces c57bl/6j )2017-04-14v4No1 / 1
124amnonassociated with glucose tolerance (other mus musculus, mouse, caecum, feces, c57bl/6j, glucose tolerance)2017-04-14v4No1 / 1
409amnon high in right colon compared to left colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 1
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, omasum2018-08-29v4No1 / 2
172amnonhighfreq japan, midgut, physopelta2017-07-25v4No1 / 2
439amnonpresent only in abomasum in yak rumen ( high in abomasum compared to omasum ruminant reticulum in bos grunniens yak rumen china farm )2018-12-31v4No1 / 2
313amnonlower in gut mucosa of fish grown in 12C compared to 18C water ( high in warm termpterature habitat 18c compared to cold temperature habitat 12c in sweden fish rainbow trout oncorhynchus mykiss research facility digestive system gastrointestinal system mucosa )2018-04-10v4No1 / 3
494amnon high in colonic mucosa compared to colonic lumen in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden 2019-02-27v4No1 / 3
172amnoncommon japan, midgut, physopelta2017-07-25v4No1 / 3
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 3
127amnonhigh in young (0-3 days) compared to old (28 day) chickens ( high in age young age compared to old age in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 3
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in linseed oil diet compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 4
329amnonhighfreq ovis aries, sheep, kingdom of norway, rumen2018-05-13v4No1 / 4
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 4
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 5
313amnonhigh freq. in rainbow trout gut mucosa grown in 18C water (highfreq sweden, fish, rainbow trout, oncorhynchus mykiss, research facility, digestive system, warm temperature habitat, 18c, gastrointestinal system mucosa)2018-04-10v4No1 / 5
431amnonhigh freq. in midgut of non-hibernating bumble bees (highfreq bombus terrestris, bumble bee, midgut, research facility, queen, no hibernation, belgium)2018-12-16v4No1 / 5
431amnonlower in midgut of hibernating bumble bees compared to non-hibernating ( high in non hibernating compared to hibernation in bombus terrestris bumble bee midgut research facility queen belgium )2018-12-16v4No1 / 5
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 5
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 5
313amnonhigh freq. in rainbow trout gut mucosa grown in 12C water (highfreq sweden, fish, rainbow trout, oncorhynchus mykiss, research facility, digestive system, gastrointestinal system mucosa, cold temperature habitat, 12c)2018-04-10v4No1 / 6
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 6
202amnon high in control compared to neoplasm mouth neoplasm cancer in homo sapiens china mouth mucosa mouth oral cavity 2017-10-01v4No1 / 6
228amnonhigher in chronic sinositis compared to healthy controls in sinus brushing ( high in sinusitis compared to control in homo sapiens mucosa sinusoidal space paranasal sinus united states of america )2017-10-31v4No1 / 8
230amnoncommon mouse, mus musculus, research facility, united states of america, upper respiratory tract2017-11-02v4No1 / 8
313amnoncommon in rainbow trout gut mucosa grown in 18C water (common sweden, fish, rainbow trout, oncorhynchus mykiss, research facility, digestive system, warm temperature habitat, 18c, gastrointestinal system mucosa)2018-04-10v4No1 / 8
431amnoncommon in midgut of non-hibernating bumble bees (common bombus terrestris, bumble bee, midgut, research facility, queen, no hibernation, belgium)2018-12-16v4No1 / 8
517amnonhighfreq mouth mucosa, mouth, chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens2019-05-29v4No1 / 8
494amnon high in colonic lumen compared to colonic mucosa in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden 2019-02-27v4No1 / 9
108amnonhighfreq research facility, texas, united states of america, caecum, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 9
279amnonhighfreq china, ochotonidae, pikas, colon, caecum2018-01-24v4No1 / 10
228amnonhigh freq. in sinus brush of healthy participants (highfreq homo sapiens, mucosa, sinusoidal space, paranasal sinus, united states of america)2017-10-31v4No1 / 11
264amnonhighfreq oryctolagus cuniculus, rex rabbit, china, caecum, research facility, jiangsu province2017-12-11v4No1 / 11
202amnon high in mouth neoplasm cancer neoplasm compared to control in homo sapiens china mouth mucosa mouth oral cavity 2017-10-01v4No1 / 11
386amnonhighfreq mouse, mus musculus, caecum, wild, bolivia2018-10-28v4No1 / 11
27amnonhighfreq bos grunniens, rumen, china2016-12-05v4No1 / 12
82amnonhigh freq. in dairy cow rumen fluid (highfreq bos taurus, sweden, rumen)2017-03-05v4No1 / 12
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 12
108amnoncommon research facility, texas, united states of america, caecum, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 12
313amnoncommon in rainbow trout gut mucosa grown in 12C water (common sweden, fish, rainbow trout, oncorhynchus mykiss, research facility, digestive system, gastrointestinal system mucosa, cold temperature habitat, 12c)2018-04-10v4No1 / 13
108amnon high in colon compared to caecum in research facility texas united states of america mus musculus mouse 2017-04-07v4No1 / 13
386amnonhighfreq mouse, mus musculus, caecum, wild, ecuador2018-10-28v4No1 / 14
186amnonhighfreq rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 14
456amnon high in tongue compared to caecum in mus musculus mouse research facility united states of america c57bl/6 female 2019-01-10v4No1 / 14
228amnonhigh freq. in sinus brush of sinusitis patients (highfreq homo sapiens, mucosa, sinusoidal space, paranasal sinus, united states of america, sinusitis)2017-10-31v4No1 / 15
25amnon high in compared to in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 15
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 15
313amnonhigher in gut mucosa of fish grown in 12C compared to 18C water ( high in cold temperature habitat 12c compared to warm temperature habitat 18c in sweden fish rainbow trout oncorhynchus mykiss research facility digestive system gastrointestinal system mucosa )2018-04-10v4No1 / 15
159amnonhighfreq siganidae, rabbitfish, hindgut, australia2017-07-06v4No1 / 15
328amnonhighfreq mouse, mus musculus, brazil, research facility, adult, balb/c, intestine, mucosa, digestive tract2018-04-30v4No1 / 15
456amnonhighfreq mus musculus, mouse, research facility, united states of america, c57bl/6, female, caecum2019-01-10v4No1 / 15
300amnonhighfreq rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 15
409amnon high in left colon compared to right colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 15
409amnonhighfreq homo sapiens, united states of america, adult, left colon, biopsy, biopsy site2018-11-22v4No1 / 15
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 16
19amnonhigh freq in biopsies of children (IBD study) (highfreq rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 16
314amnonhighfreq caecum, cecal content, china, tibet autonomous region, farm, tibetan pig, tibetan swine2018-04-10v4No1 / 16
324amnonhighfreq australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-27v4No1 / 16
324amnonhighfreq australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-27v4No1 / 16
491amnonhighfreq ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 16
83amnonhighfreq bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 6 weeks2019-03-03v4No1 / 16
434amnon high in fructose diet fructose compared to control diet in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 16
538amnonhighfreq taconic farms, right colon, colon, canada, age 8 weeks, c57bl/6, research facility, mouse, mus musculus2019-07-30v4No1 / 17
159amnonhighfreq siganidae, rabbitfish, australia, midgut2017-07-06v4No1 / 17
283amnonhighfreq pycnoscelus surinamensis, cockroach, burrowing cockroach, research facility, kingdom of denmark, hindgut, digestive system2018-01-25v4No1 / 17
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 17
386amnonhighfreq mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 17
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 17
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-29v4No1 / 18
538amnonhighfreq right colon, colon, jackson laboratories, canada, age 8 weeks, c57bl/6, research facility, mouse, mus musculus2019-07-30v4No1 / 18
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 8 weeks2019-03-03v4No1 / 18
111amnonhighfreq rumen, ruminant reticulum, omasum, mongolian sheep, china, ovis aries2017-04-09v4No1 / 18
324amnonhiger in crickets fed chemically defined diet compared to cat chow diet ( high in chemically defined diet diet compared to cat chow in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-27v4No1 / 19
256amnonhighfreq sus scrofa, pig, united kingdom, caecum, right colon, left colon2017-11-26v4No1 / 19
261amnonhighfreq bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 19
431amnonhigh freq. in midgut of hibernating bumble bees (highfreq bombus terrestris, bumble bee, midgut, research facility, queen, belgium, hibernation)2018-12-16v4No1 / 19
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum mus musculus mouse )2017-04-07v4No1 / 19
328amnonlower in feces compared to intestinal mucosa in mice ( high in mucosa intestine digestive tract compared to feces in mouse mus musculus brazil research facility adult balb/c )2018-04-30v4No1 / 20
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 4 days2019-03-03v4No1 / 20
434amnonhighfreq rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 20
439amnonhighfreq bos grunniens, yak, rumen, china, farm2018-12-31v4No1 / 20
409amnonhighfreq homo sapiens, united states of america, adult, biopsy, biopsy site, right colon2018-11-22v4No1 / 20
108amnonhighfreq research facility, texas, united states of america, caecum, mus musculus, mouse2017-04-07v4No1 / 21
108amnonhighfreq research facility, texas, united states of america, caecum, coturnix coturnix, common quail2017-04-07v4No1 / 21
124amnonhighfreq mus musculus, mouse, caecum, feces, c57bl/6j, united states of america2017-04-14v4No1 / 21
538amnon high in feces compared to right colon colon in canada age 8 weeks jackson laboratories c57bl/6 research facility mouse mus musculus 2019-07-29v4No1 / 22
71amnonhighfreq liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-25v4No1 / 23
314amnonhighfreq caecum, cecal content, china, tibet autonomous region, farm, sus scrofa, pig2018-04-10v4No1 / 23
447amnonhighfreq mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland2019-01-08v4No1 / 24
447amnonhighfreq mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland, fasting, every other day fasting2019-01-08v4No1 / 24
202amnonhighfreq homo sapiens, china, mouth mucosa, mouth, oral cavity2017-10-01v4No1 / 24
13amnon high in mouth esophagus stomach duodenum ileum compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 25
159amnon high in midgut compared to hindgut in siganidae rabbitfish australia 2017-07-06v4No1 / 25
228amnoncommon in sinus brush of sinusitis patients (common homo sapiens, mucosa, sinusoidal space, paranasal sinus, united states of america, sinusitis)2017-10-31v4No1 / 27
538amnon high in feces compared to right colon colon in taconic farms canada age 8 weeks c57bl/6 research facility mouse mus musculus 2019-07-29v4No1 / 27
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 3 weeks2019-03-03v4No1 / 27
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 12 weeks2019-03-03v4No1 / 27
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 28
127amnonhighfreq gallus gallus, chicken, united states of america, caecum, age 14-28 days2017-04-14v4No1 / 28
159amnon high in hindgut compared to midgut in siganidae rabbitfish australia 2017-07-06v4No1 / 29
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum mus musculus mouse )2017-04-07v4No1 / 29
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum coturnix coturnix common quail )2017-04-07v4No1 / 33
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 34
127amnonhigher in vaccinated chickens ( high in vaccination salmune vaccination compared to control in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 34
228amnoncommon in sinus brush of healthy participants (common homo sapiens, mucosa, sinusoidal space, paranasal sinus, united states of america)2017-10-31v4No1 / 36
19amnoncommon in biopsies of children (IBD study) (common rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 40
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
14amnon high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 42
517amnoncommon mouth mucosa, mouth, chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens2019-05-29v4No1 / 44
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 45
495amnon high in typhlitis disease intestinal disease compared to control in gallus gallus chicken caecum kingdom of spain farm free range chicken 2019-03-03v4No1 / 48
256amnonlower in intestinal contents compared to mucosal scraping in pig caecum ( high in mucosa compared to intestinal contents in sus scrofa pig united kingdom caecum )2017-11-26v4No1 / 50
14amnon high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 51
538amnon high in right colon colon compared to feces in taconic farms canada age 8 weeks c57bl/6 research facility mouse mus musculus 2019-07-29v4No1 / 51
324amnonlower in crickets fed chemically defined diet compared to cat chow diet ( high in cat chow diet compared to chemically defined diet in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-27v4No1 / 51
127amnoncommon gallus gallus, chicken, united states of america, caecum, age 14-28 days2017-04-14v4No1 / 51
439amnoncommon bos grunniens, yak, rumen, china, farm2018-12-31v4No1 / 52
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 52
279amnon high in small intestine stomach compared to caecum colon in china ochotonidae pikas 2018-01-24v4No1 / 53
431amnoncommon in midgut of hibernating bumble bees (common research facility, midgut, belgium, bombus terrestris, bumble bee, queen, hibernation)2018-12-16v4No1 / 57
228amnonlower in chronic sinositis compared to healthy controls in sinus brushing ( high in control compared to sinusitis in homo sapiens mucosa sinusoidal space paranasal sinus united states of america )2017-10-31v4No1 / 60
71amnon high in small intestine stomach compared to feces hindgut colon in liolaemus ruibali argentina research facility 2017-02-25v4No1 / 67
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 4 days2019-03-03v4No1 / 69
386amnon high in ecuador compared to bolivia in mouse mus musculus caecum wild 2018-10-28v4No1 / 70
127amnonhigher in non-vaccinated chickens ( high in control compared to vaccination salmune vaccination in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 72
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum coturnix coturnix common quail )2017-04-07v4No1 / 76
431amnonhigher in midgut of hibernating bumble bees compared to non-hibernating ( high in hibernation compared to non hibernating in bombus terrestris bumble bee midgut research facility queen belgium )2018-12-16v4No1 / 77
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-27v4No1 / 79
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 80
108amnon high in caecum compared to colon in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
108amnon high in caecum compared to colon in research facility texas united states of america mus musculus mouse 2017-04-07v4No1 / 86
386amnoncommon mouse, mus musculus, caecum, wild, ecuador2018-10-28v4No1 / 90
495amnon high in broiler chicken compared to free range chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 90
447amnonlower in mice with evert other day fasting compared to controls ( high in control compared to fasting every other day fasting in mus musculus mouse caecum c57bl/6 research facility charles river laboratories united states of america state of maryland )2019-01-08v4No1 / 92
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 94
328amnonhigher in feces compared to intestinal mucosa in mice ( high in feces compared to digestive tract intestine mucosa in mouse mus musculus brazil research facility adult balb/c )2018-04-30v4No1 / 94
409amnoncommon homo sapiens, united states of america, adult, biopsy, biopsy site, right colon2018-11-22v4No1 / 97
127amnonhigh in old (14-28 days) compared to young (0-3 day) chickens ( high in age old age compared to young age in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 98
202amnoncommon homo sapiens, china, mouth mucosa, mouth, oral cavity2017-10-01v4No1 / 100
124amnonhigher in ifn-gamma knockout comapred to wt ( high in interferon gamma knockout compared to control in mus musculus mouse caecum feces c57bl/6j united states of america )2017-04-14v4No1 / 100
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 101
256amnonhigher in intestinal contents compared to mucosal scraping in pig caecum ( high in intestinal contents compared to mucosa in sus scrofa pig united kingdom caecum )2017-11-26v4No1 / 103
108amnon high in colon compared to caecum in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 103
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 105
447amnonhigher in mice with evert other day fasting compared to controls ( high in fasting every other day fasting compared to control in mus musculus mouse caecum c57bl/6 research facility charles river laboratories united states of america state of maryland )2019-01-08v4No1 / 106
538amnon high in taconic farms compared to jackson laboratories in right colon colon canada age 8 weeks c57bl/6 research facility mouse mus musculus 2019-07-29v4No1 / 108
328amnoncommon mouse, mus musculus, brazil, research facility, adult, balb/c, intestine, mucosa, digestive tract2018-04-30v4No1 / 109
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
409amnoncommon homo sapiens, united states of america, adult, left colon, biopsy, biopsy site2018-11-22v4No1 / 118
124amnonlower in ifn-gamma knockout comapred to wt ( high in control compared to interferon gamma knockout in mus musculus mouse caecum feces c57bl/6j united states of america )2017-04-14v4No1 / 121
386amnonnegatively correlated with altitude (0-4km) in house mouse caecum ( high in low altitude compared to high altitude in mouse mus musculus caecum wild south america )2018-10-28v4No1 / 122
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 122
386amnoncommon mouse, mus musculus, caecum, wild, bolivia2018-10-28v4No1 / 129
538amnoncommon taconic farms, right colon, colon, canada, age 8 weeks, c57bl/6, research facility, mouse, mus musculus2019-07-30v4No1 / 130
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 134
314amnon high in sus scrofa pig compared to tibetan pig tibetan swine in caecum cecal content china tibet autonomous region farm 2018-04-10v4No1 / 136
538amnon high in right colon colon compared to feces in canada age 8 weeks jackson laboratories c57bl/6 research facility mouse mus musculus 2019-07-29v4No1 / 140
71amnoncommon liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-25v4No1 / 144
279amnoncommon china, ochotonidae, pikas, colon, caecum2018-01-24v4No1 / 146
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 150
314amnon high in tibetan pig tibetan swine compared to sus scrofa pig in caecum cecal content china tibet autonomous region farm 2018-04-10v4No1 / 157
108amnon high in colon compared to caecum in research facility texas united states of america coturnix coturnix common quail 2017-04-07v4No1 / 157
517amnon high in mouth mucosa mouth compared to forearm arm skin in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 162
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 163
456amnoncommon mus musculus, mouse, research facility, united states of america, c57bl/6, female, caecum2019-01-10v4No1 / 167
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-27v4No1 / 168
159amnoncommon siganidae, rabbitfish, australia, midgut2017-07-06v4No1 / 169
538amnon high in jackson laboratories compared to taconic farms in right colon colon canada age 8 weeks c57bl/6 research facility mouse mus musculus 2019-07-29v4No1 / 172
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 185
538amnoncommon right colon, colon, jackson laboratories, canada, age 8 weeks, c57bl/6, research facility, mouse, mus musculus2019-07-30v4No1 / 186
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 8 weeks2019-03-03v4No1 / 189
386amnoncommon mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 189
495amnon high in free range chicken compared to broiler chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 199
159amnoncommon siganidae, rabbitfish, hindgut, australia2017-07-06v4No1 / 208
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 210
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 12 weeks2019-03-03v4No1 / 214
108amnoncommon research facility, texas, united states of america, caecum, coturnix coturnix, common quail2017-04-07v4No1 / 216
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 231
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 3 weeks2019-03-03v4No1 / 236
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 238
434amnoncommon rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 238
108amnoncommon research facility, texas, united states of america, caecum, mus musculus, mouse2017-04-07v4No1 / 241
517amnon high in mouth mucosa mouth compared to feces in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 242
386amnon high in bolivia compared to ecuador in mouse mus musculus caecum wild 2018-10-28v4No1 / 246
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
111amnoncommon rumen, ruminant reticulum, omasum, mongolian sheep, china, ovis aries2017-04-09v4No1 / 253
71amnon high in feces colon hindgut compared to small intestine stomach in liolaemus ruibali argentina research facility 2017-02-25v4No1 / 255
386amnonpositively correlated with altitude (0-4km) in house mouse caecum ( high in high altitude compared to low altitude in mouse mus musculus caecum wild south america )2018-10-28v4No1 / 255
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 6 weeks2019-03-03v4No1 / 290
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep china ovis aries 2017-04-09v4No1 / 294
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-29v4No1 / 302
13amnon high in caecum colon rectum feces compared to mouth esophagus stomach duodenum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 316
447amnoncommon mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland, fasting, every other day fasting2019-01-08v4No1 / 328
456amnon high in caecum compared to tongue in mus musculus mouse research facility united states of america c57bl/6 female 2019-01-10v4No1 / 338
124amnoncommon mus musculus, mouse, caecum, feces, c57bl/6j, united states of america2017-04-14v4No1 / 339
447amnoncommon mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland2019-01-08v4No1 / 343
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 360
108amnon high in caecum compared to colon in research facility texas united states of america coturnix coturnix common quail 2017-04-07v4No1 / 380
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
314amnoncommon caecum, cecal content, china, tibet autonomous region, farm, sus scrofa, pig2018-04-10v4No1 / 402
186amnoncommon rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 407
495amnon high in control compared to typhlitis disease intestinal disease in gallus gallus chicken caecum kingdom of spain farm free range chicken 2019-03-03v4No1 / 412
283amnoncommon pycnoscelus surinamensis, cockroach, burrowing cockroach, research facility, kingdom of denmark, hindgut, digestive system2018-01-25v4No1 / 448
19amnonhigher in controls compared to CD in biopsies ( high in control compared to crohn's disease in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 459
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep china ovis aries 2017-04-09v4No1 / 464
314amnoncommon caecum, cecal content, china, tibet autonomous region, farm, tibetan pig, tibetan swine2018-04-10v4No1 / 467
256amnoncommon sus scrofa, pig, united kingdom, caecum, right colon, left colon2017-11-26v4No1 / 490
329amnoncommon ovis aries, sheep, kingdom of norway, rumen2018-05-13v4No1 / 506
27amnoncommon bos grunniens, rumen, china2016-12-05v4No1 / 532
264amnoncommon oryctolagus cuniculus, rex rabbit, china, caecum, research facility, jiangsu province2017-12-11v4No1 / 622
279amnon high in caecum colon compared to stomach small intestine in china ochotonidae pikas 2018-01-24v4No1 / 634
25amnoncommon oryctolagus cuniculus, caecum, rex rabbit, sichuan province, research facility2016-12-01v4No1 / 669
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 740
517amnon high in feces compared to mouth mucosa mouth in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 752
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
517amnon high in forearm arm skin compared to mouth mucosa mouth in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 1014
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1322
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

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