Summary for ontology term: oryctolagus cuniculus

Number of annotations with term: 36

Top positive-associated sequence

Taxonomy Sequence Recall
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCAACGCCGCGTGAGGGAAGAAGGTTTTCGGATTGTAAACCTCTGTCCTCAAGGACGAAGGAAGTGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.027778
d__BacteriaTGGGGAATATTGCGCAATGGGGGGAACCCTGACGCAGCAACGCCGCGTGCAGGAAGAAGGTCTTCGGATTGTAAACTGTTGTCGCAAGGGAAGAAGACAGTGACGGTACCTTGTGAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCG0.027778
d__BacteriaTCGGGAATATTGCGCAATGGAGGAAACTCTGACGCAGTGACGCCGCGTGCAGGAAGAAGGTTTTCGGATTGTAAACTGCTTTAGACAGGGAAGAAACAAATGACAGTACCTGTAGAATAAGCTCCGGCTAACTACGTGCCAGCAGCCGCG0.027778
d__BacteriaTCGGGAATATTGCGCAATGGAGGAAACTCTGACGCAGTGACGCCGCGTGCAGGAAGAAGGTTTTCGGATTGTAAACTGCTTTAGACAGGGAAGAAAAAGGACAGTACCTGTAGAATAAGCTCCGGCTAACTACGTGCCAGCAGCCGCGGT0.027778
d__BacteriaTCGGGAATATTGCGCAATGGAGGAAACTCTGACGCAGTGACGCCGCGTATAGGAAGAAGGTTTTCGGATTGTAAACTATTGTCGTTAGGGAAGAGAAAGGACAGTACCTAAGGAGGAAGCTCCGGCTAACTACGTGCCAGCAGCCGCGGT0.027778
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__PelomonasTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGCGGGAAGAAGGCCTTCGGGTTGTAAACCGCTTTTGTCAGGGAAGAAAAGGTTCTGGCTAATACCTGGGACTCATGACGGTACCTGAAGAATAAGCACCGGC0.027778
d__BacteriaTCGGGAATATTGCGCAATGGAGGGAACTCTGACGCAGTGACGCCGCGTGCAGGAAGAAGGTTTTCGGATTGTAAACTGCTTTAGACAGGGAAGAAAGAAATGACAGTACCTGTAGAATAAGCTCCGGCTAACTACGTGCCAGCAGCCGCG0.027778
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCGACGCCGCGTGAGGGAAGAAGGTCTTCGGATTGTAAACCTCTTTCAGCAGGGAAGAAGAAAGTGACGGTACCTGCAGAAGAAGTCACGGCTAACTACGTGCCAGCAGCCGCG0.027778
d__BacteriaTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAAGGAAGACGGTTTTCGGATTGTAAACTTCTTTTCTTAGTGAAGAAGCAAGTGACGGTAGCTAAGGAATAAGCATCGGCTAACTACGTGCCAGCAGCCGCG0.027778
d__BacteriaTTAGGAATATTCGTCAATGGGGGAAACCCTGAACGAGCAATGCCGCGTGAAGGATGACGGTCCTCTGGATTGTAAACTTCTGTTGTTAGGGAAGAACGACCTAGGTAGGAAATGACCTAGGAGTGACGGTACCTTTCAAGAAAGCTCCGG0.027778

Top negative-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Rikenellaceae";g__AlistipesTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCATGCCGCGTGCAGGAAGACGGCTCTATGAGTTGTAAACTGCTTTTGTACGAGGGTAAACGCTCTTACGTGTAAGAGCCTGAAAGTATCGTACGAATAAGGATCGGCTAACT0.500000
d__BacteriaTCGAGAATCTTCCGCAATGCGCGAAAGCGTGACGGAGCGATGCCGCGTGCCGGATGAAGGTCTTCGGATCGTAAACGGCTGTCACCCGGGACGAATAAATGACGGTACCGGGGAAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCGG0.500000
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__Bacteroidaceae;g__BacteroidesTGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGAAGGATGACTGCCCTATGGGTTGTAAACTTCTTTTATATGGGAATAAAGTATTCCACGTGTGGGATTTTGTATGTACCATATGAATAAGGATCGGCTAACT0.500000
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Porphyromonadaceae";g__ParabacteroidesTGAGGAATATTGGTCAATGGGCGTAAGCCTGAACCAGCCAAGTCGCGTGAGGGATGAAGGTTCTATGGATCGTAAACCTCTTTTATAAGGGAATAAAGTGCGGGACGTGTCCCGTTTTGTATGTACCTTATGAATAAGGATCGGCTAACT0.500000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__OscillibacterTGGGGAATATTGGGCAATGGACGCAAGTCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTAAGGGGGAAGAGGAGAAGACGGTACCCCTTGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGG0.500000
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__Bacteroidaceae;g__BacteroidesTGAGGAATATTGGTCAATGGGCGCAGGCCTGAACCAGCCAAGTAGCGTGAAGGATGACTGCCCTATGGGTTGTAAACTTCTTTTATATGGGAATAAAGTTTTCCACGTGTGGAATTTTGTATGTACCATATGAATAAGGATCGGCTAACT0.500000
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCAACGCCGCGTGAGGGAAGAAGGTTTTCGGATTGTAAACCTCTGTCCTAAGTGACGAAGGAAGTGACGGTAGCTTAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.500000
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__Bacteroidaceae;g__BacteroidesTGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGAAGGATGACTGCCCTATGGGTTGTAAACTTCTTTTATACGGGAATAAAGTGAGGCACGTGTGCCTTTTTGTATGTACCGTATGAATAAGGATCGGCTAACT0.500000
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Porphyromonadaceae";g__OdoribacterTGAGGAATATTGGTCAATGGACGTAAGTCTGAACCAGCCAAGTCGCGTGAGGGAAGACTGCCCTATGGGTTGTAAACCTCTTTTATAAGGGAAGAATAAGTTCTACGTGTAGAATGATGCCTGTACCTTATGAATAAGCATCGGCTAACT0.500000
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__Bacteroidaceae;g__BacteroidesTGAGGAATATTGGTCAATGGGCGCGAGCCTGAACCAGCCAAGTAGCGTGAAGGATGACTGCCCTACGGGTTGTAAACTTCTTTTATAAAGGAATAAAGTGAGGCACGTGTGCCTTTTTGTATGTACTTTATGAATAAGGATCGGCTAACT0.500000

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTATGAGGGACGAAGGACGTGACGGTACCTCATGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCG0.481481
d__BacteriaTGAGGAATATTGGACAATGGCCGGAAGGCTGATCCAGCCATGCCGCGTGAGGGAATGAGGTCCTATGGATTGTAAACCTCTTTTCACGCAGGGCAATAAGGTCCACGAGGTGGACCGACGAGAGTATGCGTGGAATAAGCATCGGCTAAC0.425532
d__Bacteria;p__"Bacteroidetes"TGAGGAATATTGGACAATGGATGGAAATCTGATCCAGCCATGCCGCGTGCAGGAAGGCGGTCCTATGGATTGTAAACTGCTTTTGTACGGGAGCAATAATTTCTACGGGATAGGGAGATGAGAGTACCGTACGAATCAGCATCGGCTAAC0.400000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTAGGCGGGTCAATAAGTCAGATGTGAAATACCGAGGCTTAACTTCGGAACTGCAACTGAAACTGATGATCTTGAGTGCTGGAGAGGAAAGTGGAATTCCTAG0.355556
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGGAGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGTAGGCGGGCCGACAAGTCAGATGTGAAAACTATGGGCTTAACCCATAGCCTGCATTTGAAACTGCCGGTCTTGAGTATCGGAGAGGCAATCGGAATTCCGTG0.355556
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales"TGAGGAATATTGGTCAATGGGCGCGAGCCTGAACCAGCCAAGTCGCGTGAGGGAAGACGGCCTTATGGGTTGTAAACCTCTTTCAGATGAGAGTAAAGGGTGCTACGCGTAGCACATTGCAAGTATCATCAGAAGAAGCATCGGCTAATT0.355556
d__Bacteria;p__Firmicutes;c__Clostridia;o__ClostridialesTACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTAGGCGGGTAGGCAAGTCAGATGTGAAATCTCCGGGCTCAACCCGGAAACTGCATTTGAAACTGTCTATCTTGAGTATCGGAGAGGCAAGCGGAATTCCGTG0.352941
d__BacteriaTACAGAGGTCTCAAGCGTTGTTCGGAATCACTGGGCGTAAAGGGTACGTAGGCGGCGGGGCAAGTTGCGCGTGAAAGGCAGGGGCTCAACCTCTGGAATGCGCGTGAAACTACCCTGCTAGAGCGATGGAGGGGGAACCGGAATTCTTGG0.347826
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales"TGAGGAATATTGGTCAATGGGCGCGAGCCTGAACCAGCCAAGTAGCGTGAAGGAAGACGGCCCTACGGGTTGTAAACTTCTTTTATACGGGAATAAGAACGTCCACGAGTGGATGCGTGCATGTACCGTATGAATAAGCATCGGCTAACT0.333333
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Rikenellaceae";g__AlistipesTACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGTTTGATAAGTTAGAGGTGAAATGCCGGGGCTCAACTCCGGAACTGCCTCTGATACTGTTGAGCTAGAGAGTAGATGCGGTAGGCGGAATGTATGG0.318182

Annotations:

common ontology terms
Fraction of dbbact annotations with this term covered by the query
TermScore
rabbit1.000000
oryctolagus cuniculus1.000000
antimicrobial agent1.000000
antibiotics supllemented diet1.000000
LOWER IN antibiotics supllemented diet1.000000
ad libitum diet1.000000
LOWER IN farm21.000000
farm11.000000
LOWER IN farm11.000000
farm21.000000
european rabbit0.666667
rex rabbit0.666667
exclusive breastmilk diet0.500000
hyplus rabbit0.500000
LOWER IN solid food diet0.500000
LOWER IN soild food supplemented diet0.500000
soild food supplemented diet0.500000
LOWER IN exclusive breastmilk diet0.500000
solid food diet0.500000
nature reserve0.500000
LOWER IN european brown hare0.500000
european brown hare0.500000
restricted feed0.333333
LOWER IN restricted feed0.333333
juvenile0.333333
LOWER IN age 5 weeks0.333333
age 5 weeks0.333333
LOWER IN european rabbit0.333333
age 3 weeks0.250000
LOWER IN age 3 weeks0.250000
LOWER IN lepus europaeus0.250000
lepus europaeus0.250000
age 2 months0.200000
LOWER IN normal diet0.200000
cecal content0.142857
LOWER IN oryctolagus cuniculus0.125000
antibiotic0.111111
LOWER IN antibiotic0.111111
commonwealth of pennsylvania0.100000
sichuan province0.100000
caecum0.095238
jiangsu province0.076923
french republic0.071429
control diet0.066667
LOWER IN control diet0.066667
kingdom of spain0.047619
italy0.045455
wild0.038462
research facility0.037037
australia0.037037
feces0.011594
LOWER IN control0.010526
control0.010526
united states of america0.007722
china0.005405
adult0.005376
LOWER IN 0.000092
Fraction of annotations for the query sequences containing the term
TermScore
oryctolagus cuniculus0.972222
research facility0.833333
caecum0.722222
rabbit0.611111
feces0.277778
juvenile0.277778
cecal content0.277778
hyplus rabbit0.277778
french republic0.277778
age 2 months0.222222
kingdom of spain0.222222
rex rabbit0.222222
exclusive breastmilk diet0.194444
age 5 weeks0.194444
sichuan province0.166667
european rabbit0.138889
united states of america0.111111
nature reserve0.111111
adult0.111111
wild0.111111
australia0.111111
LOWER IN control0.083333
antibiotic0.083333
LOWER IN antibiotic0.083333
control0.083333
age 3 weeks0.083333
soild food supplemented diet0.083333
solid food diet0.083333
control diet0.055556
commonwealth of pennsylvania0.055556
italy0.055556
jiangsu province0.055556
china0.055556
antimicrobial agent0.027778
LOWER IN normal diet0.027778
antibiotics supllemented diet0.027778
LOWER IN antibiotics supllemented diet0.027778
LOWER IN 0.027778
LOWER IN control diet0.027778
restricted feed0.027778
LOWER IN restricted feed0.027778
ad libitum diet0.027778
LOWER IN farm20.027778
farm10.027778
LOWER IN farm10.027778
farm20.027778
LOWER IN age 5 weeks0.027778
LOWER IN age 3 weeks0.027778
LOWER IN solid food diet0.027778
LOWER IN soild food supplemented diet0.027778
LOWER IN exclusive breastmilk diet0.027778
LOWER IN lepus europaeus0.027778
LOWER IN european brown hare0.027778
LOWER IN oryctolagus cuniculus0.027778
LOWER IN european rabbit0.027778
european brown hare0.027778
lepus europaeus0.027778
Number of experiments associating the term to the sequence
TermScore
oryctolagus cuniculus8.000000
research facility6.000000
caecum4.000000
rabbit4.000000
feces4.000000
LOWER IN control2.000000
antibiotic2.000000
LOWER IN antibiotic2.000000
control2.000000
united states of america2.000000
european rabbit2.000000
rex rabbit2.000000
age 2 months1.000000
kingdom of spain1.000000
antimicrobial agent1.000000
LOWER IN normal diet1.000000
antibiotics supllemented diet1.000000
LOWER IN antibiotics supllemented diet1.000000
LOWER IN 1.000000
control diet1.000000
LOWER IN control diet1.000000
restricted feed1.000000
LOWER IN restricted feed1.000000
ad libitum diet1.000000
LOWER IN farm21.000000
farm11.000000
LOWER IN farm11.000000
farm21.000000
commonwealth of pennsylvania1.000000
exclusive breastmilk diet1.000000
juvenile1.000000
LOWER IN age 5 weeks1.000000
age 3 weeks1.000000
cecal content1.000000
hyplus rabbit1.000000
french republic1.000000
LOWER IN age 3 weeks1.000000
age 5 weeks1.000000
LOWER IN solid food diet1.000000
LOWER IN soild food supplemented diet1.000000
soild food supplemented diet1.000000
LOWER IN exclusive breastmilk diet1.000000
solid food diet1.000000
nature reserve1.000000
adult1.000000
wild1.000000
australia1.000000
LOWER IN lepus europaeus1.000000
LOWER IN european brown hare1.000000
LOWER IN oryctolagus cuniculus1.000000
LOWER IN european rabbit1.000000
european brown hare1.000000
lepus europaeus1.000000
italy1.000000
sichuan province1.000000
jiangsu province1.000000
china1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v41 / 5approvedNo
592amnondominant united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v11 / 8approvedNo
916amnondominant rabbit, age 2 months, kingdom of spain, oryctolagus cuniculus, caecum, research facility2022-07-04v41 / 10approvedNo
264amnondominant oryctolagus cuniculus, rex rabbit, caecum, research facility, jiangsu province, china2017-12-11v41 / 11approvedNo
399amnondominant feces, united states of america, oryctolagus cuniculus, rabbit, research facility2018-11-16v41 / 14approvedNo
25amnon high in compared to in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v41 / 15approvedNo
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v41 / 15approvedNo
639amnondominant nature reserve, adult, wild, australia, feces, european rabbit, oryctolagus cuniculus2020-08-21v31 / 17approvedNo
666amnondominant european rabbit, oryctolagus cuniculus, italy, feces2020-09-25v31 / 18approvedNo
853amnondominant solid food diet, soild food supplemented diet, hyplus rabbit, age 5 weeks, juvenile, caecum, rabbit, cecal content, french republic, oryctolagus cuniculus, research facility2021-12-20v31 / 21approvedNo
853amnon high in age 3 weeks compared to age 5 weeks in exclusive breastmilk diet juvenile cecal content caecum hyplus rabbit rabbit oryctolagus cuniculus french republic research facility 2021-12-18v31 / 23approvedNo
916amnon high in restricted feed compared to control diet in rabbit age 2 months kingdom of spain oryctolagus cuniculus caecum research facility 2022-07-04v41 / 24approvedNo
853amnondominant exclusive breastmilk diet, hyplus rabbit, juvenile, age 3 weeks, rabbit, cecal content, french republic, oryctolagus cuniculus, caecum, research facility2021-12-18v31 / 24approvedNo
853amnondominant exclusive breastmilk diet, hyplus rabbit, age 5 weeks, juvenile, rabbit, cecal content, french republic, oryctolagus cuniculus, caecum, research facility2021-12-20v31 / 24approvedNo
916amnon high in ad libitum diet control diet compared to restricted feed in rabbit age 2 months kingdom of spain oryctolagus cuniculus caecum research facility 2022-07-04v41 / 27approvedNo
853amnon high in exclusive breastmilk diet compared to solid food diet soild food supplemented diet in hyplus rabbit age 5 weeks juvenile rabbit cecal content french republic oryctolagus cuniculus caecum research facility 2021-12-20v31 / 47approvedNo
853amnon high in age 5 weeks compared to age 3 weeks in exclusive breastmilk diet hyplus rabbit juvenile rabbit cecal content french republic oryctolagus cuniculus caecum research facility 2021-12-18v31 / 49approvedNo
853amnon high in soild food supplemented diet solid food diet compared to exclusive breastmilk diet in hyplus rabbit age 5 weeks juvenile rabbit cecal content french republic oryctolagus cuniculus caecum research facility 2021-12-20v31 / 71approvedNo
853amnoncommon age 3 weeks, exclusive breastmilk diet, hyplus rabbit, juvenile, rabbit, cecal content, french republic, oryctolagus cuniculus, caecum, research facility2021-12-18v31 / 82approvedNo
853amnoncommon age 5 weeks, exclusive breastmilk diet, hyplus rabbit, juvenile, rabbit, cecal content, french republic, oryctolagus cuniculus, caecum, research facility2021-12-20v31 / 96approvedNo
853amnoncommon soild food supplemented diet, solid food diet, hyplus rabbit, age 5 weeks, juvenile, caecum, rabbit, cecal content, french republic, oryctolagus cuniculus, research facility2021-12-20v31 / 114approvedNo
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v41 / 163approvedNo
592amnoncommon united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v11 / 196approvedNo
916amnon high in antimicrobial agent antibiotics supllemented diet antibiotic compared to normal diet control in rabbit age 2 months kingdom of spain oryctolagus cuniculus caecum research facility 2022-07-04v41 / 226approvedNo
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v41 / 231approvedNo
639amnon high in european brown hare lepus europaeus compared to oryctolagus cuniculus european rabbit in nature reserve adult wild australia feces 2020-08-21v31 / 235approvedNo
916amnon high in control diet control compared to antibiotics supllemented diet antibiotic in rabbit age 2 months kingdom of spain oryctolagus cuniculus caecum research facility 2022-07-04v41 / 246approvedNo
666amnoncommon european rabbit, oryctolagus cuniculus, italy, feces2020-09-25v31 / 252approvedNo
639amnoncommon nature reserve, adult, wild, australia, feces, european rabbit, oryctolagus cuniculus2020-08-21v31 / 280approvedNo
916amnoncommon age 2 months, caecum, rabbit, oryctolagus cuniculus, research facility, kingdom of spain2022-07-04v41 / 361approvedNo
639amnon high in oryctolagus cuniculus european rabbit compared to lepus europaeus european brown hare in nature reserve adult wild australia feces 2020-08-21v31 / 480approvedNo
399amnoncommon feces, united states of america, oryctolagus cuniculus, rabbit, research facility2018-11-16v41 / 577approvedNo
264amnoncommon oryctolagus cuniculus, rex rabbit, caecum, research facility, jiangsu province, china2017-12-11v41 / 622approvedNo
25amnoncommon oryctolagus cuniculus, caecum, rex rabbit, sichuan province, research facility2016-12-01v41 / 669approvedNo
916amnon high in farm2 compared to farm1 in rabbit age 2 months kingdom of spain oryctolagus cuniculus caecum research facility 2022-07-04v41 / 1191approvedNo
916amnon high in farm1 compared to farm2 in rabbit age 2 months kingdom of spain oryctolagus cuniculus caecum research facility 2022-07-04v41 / 1423approvedNo

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