Summary for ontology term: pathogen

Number of annotations with term: 15

Annotations:

common ontology terms
term enrichment score
TermScore
pathogen0.960000
blood0.285714
bangkok0.285714
semi domestic dog0.285714
clostridium difficile0.222222
thailand0.181818
diarrhea0.173913
ehrlichiosis0.117647
ehrlichia canis0.117647
mycoplasma haemocanis0.117647
huanglongbing0.117647
anaplasma platys0.117647
anaplasmosis0.117647
bangladesh0.117647
fungal cell0.117647
mucosa of stomach0.117647
helicobacter pylori0.117647
whipple disease0.117647
whipple's disease0.117647
citrus0.111111
helicobacter pylori infectious disease0.111111
apis mellifera0.111111
bronchial epithelium0.100000
disease0.090909
biopsy0.090909
dog0.074074
south korea0.071429
state of florida0.066667
stomach0.064516
canis lupus familiaris0.064516
israel0.062500
leaf0.057143
homo sapiens0.028986
feces0.012579
LOWER IN control0.010811
Fraction of dbbact annotations with this term covered by the query
TermScore
pathogen0.923077
clostridium difficile0.666667
blood0.500000
bangkok0.500000
semi domestic dog0.500000
ehrlichiosis0.500000
ehrlichia canis0.500000
mycoplasma haemocanis0.500000
huanglongbing0.500000
anaplasma platys0.500000
anaplasmosis0.500000
bangladesh0.500000
fungal cell0.500000
mucosa of stomach0.500000
helicobacter pylori0.500000
whipple disease0.500000
whipple's disease0.500000
citrus0.333333
helicobacter pylori infectious disease0.333333
apis mellifera0.333333
diarrhea0.250000
bronchial epithelium0.200000
thailand0.166667
disease0.142857
biopsy0.142857
south korea0.076923
state of florida0.066667
stomach0.062500
israel0.058824
leaf0.050000
dog0.045455
canis lupus familiaris0.038462
homo sapiens0.015326
feces0.006601
LOWER IN control0.005882
Fraction of annotations for the query sequences containing the term
TermScore
pathogen1.000000
homo sapiens0.266667
blood0.200000
dog0.200000
canis lupus familiaris0.200000
thailand0.200000
bangkok0.200000
semi domestic dog0.200000
clostridium difficile0.133333
feces0.133333
diarrhea0.133333
ehrlichiosis0.066667
ehrlichia canis0.066667
mycoplasma haemocanis0.066667
citrus0.066667
leaf0.066667
huanglongbing0.066667
disease0.066667
state of florida0.066667
anaplasma platys0.066667
anaplasmosis0.066667
bangladesh0.066667
fungal cell0.066667
israel0.066667
LOWER IN control0.066667
south korea0.066667
mucosa of stomach0.066667
stomach0.066667
biopsy0.066667
helicobacter pylori0.066667
helicobacter pylori infectious disease0.066667
bronchial epithelium0.066667
whipple disease0.066667
whipple's disease0.066667
apis mellifera0.066667
Exp. ID User ID Description Date Region Flag Sequences
664amnoncausitive bacteria for ehrlichiosis (other blood, dog, canis lupus familiaris, thailand, bangkok, semi domestic dog, ehrlichiosis, ehrlichia canis, pathogen)2020-09-22v4No1 / 1
664amnondog blood mycoplasma (other mycoplasma haemocanis, blood, pathogen, semi domestic dog, bangkok, thailand, canis lupus familiaris, dog)2020-09-22v4No1 / 1
98amnonHuanglongbing (Citrus greening) disease (other citrus, pathogen, leaf, huanglongbing, disease, state of florida)2017-04-01v4No1 / 1
325amnonclostridium difficile pathogen (other pathogen, clostridium difficile)2018-04-29v4No1 / 1
664amnonanaplasmosis causing pathogen (other anaplasma platys, anaplasmosis, pathogen, blood, dog, canis lupus familiaris, thailand, bangkok, semi domestic dog)2020-09-22v4No1 / 1
121amnoncausitive agent for acute diarrhea (other pathogen, homo sapiens, feces, bangladesh, diarrhea)2017-04-13v4No1 / 1
207amnonPathogen - campylobacter (human diarrhea) (other pathogen)2017-10-05v4No1 / 1
207amnonhigher in people hospitalized with diarrhea compared to healthy controls ( high in diarrhea compared to control in pathogen homo sapiens israel feces )2017-10-05v4No1 / 1
569amnonHelicobacter pylori pathogen (other homo sapiens, south korea, mucosa of stomach, stomach, biopsy, helicobacter pylori, pathogen, helicobacter pylori infectious disease)2019-12-16v3No1 / 1
728amnonclostridium difficile pathogen (other pathogen, clostridium difficile)2021-01-05v3No1 / 1
188amnonSalmonella enterica (other pathogen)2017-08-24v4No1 / 1
189amnoncauses Pierce’s Disease in grapes (other pathogen)2017-08-30v4No1 / 1
335amnonTropheryma whipplei (other homo sapiens, bronchial epithelium, pathogen, whipple disease, whipple's disease)2018-05-16v4No1 / 1
59amnoncandidate pathogen (Melissococcus plutonius). Causes European Foulbrood of honeybees (other pathogen, apis mellifera)2017-02-02v4No1 / 1
266amnonbrassicaceae fungal pathogen (other pathogen, fungal cell)2017-12-18v4No1 / 5

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