Summary for ontology term: pathogen

Number of annotations with term: 14

Annotations:

common ontology terms
term enrichment score
TermScore
pathogen1.000000
thailand0.230769
diarrhea0.190476
huanglongbing0.125000
clostridium difficile0.125000
bangladesh0.125000
fungal cell0.125000
mucosa of stomach0.125000
helicobacter pylori0.125000
helicobacter pylori infectious disease0.125000
whipple disease0.125000
whipple's disease0.125000
citrus0.117647
apis mellifera0.117647
dog0.113208
bronchial epithelium0.105263
disease0.100000
south korea0.100000
biopsy0.100000
canis lupus familiaris0.092308
israel0.071429
stomach0.071429
state of florida0.068966
leaf0.058824
homo sapiens0.037915
feces0.015564
LOWER IN control0.012739
Fraction of dbbact annotations with this term covered by the query
TermScore
pathogen1.000000
huanglongbing0.500000
clostridium difficile0.500000
bangladesh0.500000
fungal cell0.500000
mucosa of stomach0.500000
helicobacter pylori0.500000
helicobacter pylori infectious disease0.500000
whipple disease0.500000
whipple's disease0.500000
citrus0.333333
apis mellifera0.333333
diarrhea0.285714
thailand0.250000
bronchial epithelium0.200000
disease0.166667
south korea0.166667
biopsy0.166667
dog0.076923
israel0.071429
stomach0.071429
state of florida0.066667
canis lupus familiaris0.058824
leaf0.050000
homo sapiens0.020305
feces0.008230
LOWER IN control0.006993
Fraction of annotations for the query sequences containing the term
TermScore
pathogen1.000000
homo sapiens0.285714
blood0.214286
dog0.214286
canis lupus familiaris0.214286
thailand0.214286
bangkok0.214286
semi domestic dog0.214286
feces0.142857
diarrhea0.142857
ehrlichiosis0.071429
ehrlichia canis0.071429
mycoplasma haemocanis0.071429
citrus0.071429
leaf0.071429
huanglongbing0.071429
disease0.071429
state of florida0.071429
clostridium difficile0.071429
anaplasma platys0.071429
anaplasmosis0.071429
bangladesh0.071429
fungal cell0.071429
israel0.071429
LOWER IN control0.071429
south korea0.071429
mucosa of stomach0.071429
stomach0.071429
biopsy0.071429
helicobacter pylori0.071429
helicobacter pylori infectious disease0.071429
bronchial epithelium0.071429
whipple disease0.071429
whipple's disease0.071429
apis mellifera0.071429
Exp. ID User ID Description Date Region Flag Sequences
664amnoncausitive bacteria for ehrlichiosis (other blood, dog, canis lupus familiaris, thailand, bangkok, semi domestic dog, ehrlichiosis, ehrlichia canis, pathogen)2020-09-22v4No1 / 0
664amnondog blood mycoplasma (other mycoplasma haemocanis, blood, pathogen, semi domestic dog, bangkok, thailand, canis lupus familiaris, dog)2020-09-22v4No1 / 0
98amnonHuanglongbing (Citrus greening) disease (other citrus, pathogen, leaf, huanglongbing, disease, state of florida)2017-04-01v4No1 / 0
325amnonclostridium difficile pathogen (other pathogen, clostridium difficile)2018-04-29v4No1 / 0
664amnonanaplasmosis causing pathogen (other anaplasma platys, anaplasmosis, pathogen, blood, dog, canis lupus familiaris, thailand, bangkok, semi domestic dog)2020-09-22v4No1 / 0
121amnoncausitive agent for acute diarrhea (other pathogen, homo sapiens, feces, bangladesh, diarrhea)2017-04-13v4No1 / 0
207amnonPathogen - campylobacter (human diarrhea) (other pathogen)2017-10-05v4No1 / 0
207amnonhigher in people hospitalized with diarrhea compared to healthy controls ( high in diarrhea compared to control in pathogen homo sapiens israel feces )2017-10-05v4No1 / 0
569amnonHelicobacter pylori pathogen (other homo sapiens, south korea, mucosa of stomach, stomach, biopsy, helicobacter pylori, pathogen, helicobacter pylori infectious disease)2019-12-16v3No1 / 0
188amnonSalmonella enterica (other pathogen)2017-08-24v4No1 / 0
189amnoncauses Pierce’s Disease in grapes (other pathogen)2017-08-30v4No1 / 0
335amnonTropheryma whipplei (other homo sapiens, bronchial epithelium, pathogen, whipple disease, whipple's disease)2018-05-16v4No1 / 0
59amnoncandidate pathogen (Melissococcus plutonius). Causes European Foulbrood of honeybees (other pathogen, apis mellifera)2017-02-02v4No1 / 0
266amnonbrassicaceae fungal pathogen (other pathogen, fungal cell)2017-12-18v4No1 / 4

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