Summary for ontology term: periodontitis

Number of annotations with term: 26

Annotations:

common ontology terms
term enrichment score
TermScore
subgingival plaque0.766169
periodontitis0.727273
LOWER IN periodontitis0.536913
dentition0.450000
mouth0.418605
macaca mulatta0.210526
puerto rico0.210526
brazil0.208333
depth < 3mm0.187500
shallow pocket depth0.187500
deep pocket depth0.187500
depth > 3mm0.187500
monkey0.137931
moscow0.133333
age 1-7 years0.133333
induced periodontitis0.133333
LOWER IN induced periodontitis0.133333
age 12-23 years0.133333
san diego0.133333
periodontal pocket0.133333
atlanta0.125000
russia0.117647
LOWER IN control0.114449
control0.113636
homo sapiens0.085746
germany0.083333
state of california0.078431
adult0.072664
LOWER IN depth > 3mm0.071429
LOWER IN deep pocket depth0.071429
LOWER IN shallow pocket depth0.071429
LOWER IN depth < 3mm0.071429
child0.064516
saliva0.052632
united states of america0.031128
research facility0.019324
Fraction of dbbact annotations with this term covered by the query
TermScore
periodontitis0.888889
LOWER IN periodontitis0.888889
subgingival plaque0.700000
moscow0.500000
age 1-7 years0.500000
induced periodontitis0.500000
LOWER IN induced periodontitis0.500000
age 12-23 years0.500000
san diego0.500000
periodontal pocket0.500000
depth < 3mm0.500000
LOWER IN depth > 3mm0.500000
LOWER IN deep pocket depth0.500000
shallow pocket depth0.500000
deep pocket depth0.500000
depth > 3mm0.500000
LOWER IN shallow pocket depth0.500000
LOWER IN depth < 3mm0.500000
dentition0.333333
macaca mulatta0.333333
puerto rico0.333333
atlanta0.333333
mouth0.300000
russia0.250000
brazil0.142857
monkey0.125000
germany0.090909
LOWER IN control0.067227
control0.066667
child0.055556
state of california0.052632
homo sapiens0.045161
saliva0.040000
adult0.038961
united states of america0.016393
research facility0.010309
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens0.846154
subgingival plaque0.846154
dentition0.692308
mouth0.692308
periodontitis0.615385
adult0.538462
LOWER IN control0.384615
control0.384615
LOWER IN periodontitis0.384615
brazil0.384615
united states of america0.307692
monkey0.153846
macaca mulatta0.153846
research facility0.153846
puerto rico0.153846
state of california0.153846
depth < 3mm0.115385
shallow pocket depth0.115385
deep pocket depth0.115385
depth > 3mm0.115385
russia0.076923
moscow0.076923
germany0.076923
child0.076923
age 1-7 years0.076923
induced periodontitis0.076923
LOWER IN induced periodontitis0.076923
age 12-23 years0.076923
san diego0.076923
periodontal pocket0.076923
saliva0.076923
atlanta0.076923
LOWER IN depth > 3mm0.038462
LOWER IN deep pocket depth0.038462
LOWER IN shallow pocket depth0.038462
LOWER IN depth < 3mm0.038462
Exp. ID User ID Description Date Region Flag Sequences
104amnon high in control compared to periodontitis in homo sapiens russia moscow subgingival plaque dentition mouth 2017-04-05v4No1 / 3
278amnon high in control compared to periodontitis in homo sapiens united states of america state of california adult saliva 2018-01-23v4No1 / 3
104amnon high in periodontitis compared to control in homo sapiens russia moscow subgingival plaque dentition mouth 2017-04-05v4No1 / 5
378amnon high in periodontitis compared to control in homo sapiens brazil subgingival plaque dentition adult mouth 2018-09-14v4No1 / 7
102amnon high in control compared to periodontitis in homo sapiens atlanta united states of america mouth 2017-04-04v4No1 / 7
378amnon high in control compared to periodontitis in homo sapiens brazil subgingival plaque dentition adult mouth 2018-09-14v4No1 / 10
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v4No1 / 11
106amnon high in control compared to periodontitis in homo sapiens dentition germany subgingival plaque mouth 2017-04-05v4No1 / 14
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v4No1 / 15
162amnon high in control compared to periodontitis in homo sapiens united states of america san diego dentition subgingival plaque periodontal pocket mouth 2017-07-13v4No1 / 16
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v4No1 / 17
106amnon high in periodontitis compared to control in homo sapiens dentition germany subgingival plaque mouth 2017-04-05v4No1 / 21
378amnonhighfreq homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, periodontitis, mouth2018-09-14v4No1 / 22
278amnon high in periodontitis compared to control in homo sapiens united states of america state of california adult saliva 2018-01-23v4No1 / 22
96amnon high in control compared to periodontitis in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 24
378amnonhighfreq homo sapiens, brazil, subgingival plaque, dentition, adult, depth > 3mm, deep pocket depth, periodontitis, mouth2018-09-14v4No1 / 24
378amnon high in depth < 3mm shallow pocket depth compared to depth > 3mm deep pocket depth in homo sapiens brazil subgingival plaque dentition adult periodontitis mouth 2018-09-13v4No1 / 28
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v4No1 / 33
378amnon high in deep pocket depth depth > 3mm compared to shallow pocket depth depth < 3mm in homo sapiens brazil subgingival plaque dentition adult periodontitis mouth 2018-09-13v4No1 / 40
96amnon high in periodontitis compared to control in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 48
278amnon high in periodontitis compared to control in homo sapiens united states of america state of california adult subgingival plaque 2018-01-23v4No1 / 52
162amnon high in periodontitis compared to control in homo sapiens united states of america san diego dentition subgingival plaque periodontal pocket mouth 2017-07-13v4No1 / 53
102amnon high in periodontitis compared to control in homo sapiens atlanta united states of america mouth 2017-04-04v4No1 / 53
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, depth > 3mm, deep pocket depth, periodontitis, mouth2018-09-14v4No1 / 80
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, periodontitis, mouth2018-09-14v4No1 / 84
278amnon high in control compared to periodontitis in homo sapiens united states of america state of california adult subgingival plaque 2018-01-23v4No1 / 107

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