Summary for ontology term: populated place

Number of annotations with term: 99

Annotations:

common ontology terms
term enrichment score
TermScore
city0.900795
hokkaido0.177778
rural community0.153846
colombia0.150943
LOWER IN city0.147692
late adult stage0.139130
starfish0.139130
coelomic fluid0.130081
village0.111111
japan0.103896
homo sapiens0.094651
small village0.094637
air0.088889
adult0.088328
state of colorado0.081633
hong kong0.074766
shuar population0.074766
asterias amurensis0.074766
patiria pectinifera0.074766
house mice0.074766
ivy0.074766
hedera ibernica0.074766
cameroon0.072072
south america0.072072
feces0.067980
LOWER IN united states of america0.067227
ecuador0.065041
new york city0.065041
saliva0.062222
wild0.061776
belgium0.061069
LOWER IN small village0.058252
LOWER IN rural community0.057143
yaounde0.057143
shantytown0.057143
lima0.057143
LOWER IN amerindian0.057143
LOWER IN hunter gatherer0.057143
LOWER IN venezuela0.057143
vellore district0.057143
el salvador0.057143
state of oklahoma0.055556
amerindian0.055556
venezuela0.055556
dense settlement biome0.055556
hunter gatherer0.054054
gay0.054054
china0.053068
wastewater treatment plant0.052632
msw0.052632
heterosexual0.052632
age 2 months0.051282
homosexual0.051282
msm0.051282
india0.050000
supragingival plaque0.048780
leaf0.044693
united states of america0.039448
nouabale-ndoki national park0.038835
republic of congo0.038835
train0.038835
boston0.038835
subway0.038835
columbia0.038835
waste water0.038835
xinxiang city prefecture0.038835
jiulong river0.038835
fujian province0.038835
LOWER IN starfish0.038835
LOWER IN coelomic fluid0.038835
LOWER IN patiria pectinifera0.038835
LOWER IN asterias amurensis0.038835
low income0.038835
age 200.038835
madrid0.038095
depth 0.5m0.038095
urban biome0.037383
state of arizona0.037383
infant0.037037
dentition0.037037
sea water0.034043
hospital0.033613
LOWER IN sea water0.033613
LOWER IN wild0.033058
river0.032520
kingdom of spain0.029197
fresh water0.028777
skin0.025157
mouse0.025078
mus musculus0.023055
LOWER IN peru0.019802
LOWER IN tunapuco0.019802
tunapuco0.019802
LOWER IN state of oklahoma0.019802
ngoantet0.019802
LOWER IN yaounde0.019802
LOWER IN ngoantet0.019802
LOWER IN el salado0.019802
LOWER IN upano valley0.019802
cross-cutucu0.019802
Fraction of dbbact annotations with this term covered by the query
TermScore
city0.947368
LOWER IN city0.857143
LOWER IN small village0.750000
small village0.750000
village0.666667
LOWER IN peru0.500000
LOWER IN tunapuco0.500000
LOWER IN rural community0.500000
tunapuco0.500000
rural community0.500000
LOWER IN state of oklahoma0.500000
nouabale-ndoki national park0.500000
republic of congo0.500000
ngoantet0.500000
LOWER IN yaounde0.500000
yaounde0.500000
LOWER IN ngoantet0.500000
shantytown0.500000
lima0.500000
LOWER IN el salado0.500000
LOWER IN amerindian0.500000
LOWER IN hunter gatherer0.500000
LOWER IN venezuela0.500000
train0.500000
boston0.500000
hong kong0.500000
subway0.500000
shuar population0.500000
LOWER IN upano valley0.500000
cross-cutucu0.500000
LOWER IN cross-cutucu0.500000
upano valley0.500000
low hdl0.500000
LOWER IN high hdl0.500000
bogota0.500000
LOWER IN municipality of santiago de cali0.500000
LOWER IN bucaramanga0.500000
LOWER IN barranquilla0.500000
barranquilla0.500000
bucaramanga0.500000
municipality of santiago de cali0.500000
LOWER IN bogota0.500000
LOWER IN medellin metropolitan area0.500000
high filber0.500000
LOWER IN low fiber0.500000
high hdl0.500000
LOWER IN low hdl0.500000
columbia0.500000
normal stool0.500000
LOWER IN hard stool0.500000
hard stool0.500000
LOWER IN normal stool0.500000
low fiber0.500000
waste water0.500000
xinxiang city prefecture0.500000
jiulong river0.500000
fujian province0.500000
LOWER IN populated place0.500000
populated place0.500000
late adult stage0.500000
starfish0.500000
asterias amurensis0.500000
patiria pectinifera0.500000
LOWER IN starfish0.500000
LOWER IN coelomic fluid0.500000
LOWER IN patiria pectinifera0.500000
LOWER IN asterias amurensis0.500000
vellore district0.500000
el salvador0.500000
LOWER IN lima0.500000
LOWER IN shantytown0.500000
low income0.500000
sewer0.500000
LOWER IN sewer0.500000
LOWER IN influent0.500000
LOWER IN sewage0.500000
sewage0.500000
LOWER IN effluent0.500000
dental caries0.500000
age 200.500000
house mice0.500000
queens region0.500000
LOWER IN manhatten region0.500000
manhatten region0.500000
LOWER IN queens region0.500000
LOWER IN dental caries0.500000
ivy0.500000
hedera ibernica0.500000
LOWER IN moor0.500000
LOWER IN forest ecosystem0.500000
moor0.500000
LOWER IN dense settlement biome0.500000
state of oklahoma0.333333
peru0.333333
cameroon0.333333
amerindian0.333333
venezuela0.333333
madrid0.333333
medellin metropolitan area0.333333
lean body mass0.333333
Fraction of annotations for the query sequences containing the term
TermScore
city0.858586
homo sapiens0.646465
feces0.494949
adult0.424242
united states of america0.181818
china0.161616
colombia0.121212
hokkaido0.121212
japan0.121212
rural community0.090909
LOWER IN city0.080808
late adult stage0.080808
starfish0.080808
coelomic fluid0.080808
wild0.080808
saliva0.070707
village0.060606
air0.060606
state of colorado0.060606
small village0.050505
LOWER IN united states of america0.040404
cameroon0.040404
hong kong0.040404
shuar population0.040404
ecuador0.040404
sea water0.040404
asterias amurensis0.040404
patiria pectinifera0.040404
south america0.040404
mus musculus0.040404
house mice0.040404
mouse0.040404
new york city0.040404
belgium0.040404
ivy0.040404
hedera ibernica0.040404
leaf0.040404
state of oklahoma0.030303
LOWER IN small village0.030303
LOWER IN rural community0.030303
yaounde0.030303
shantytown0.030303
lima0.030303
hunter gatherer0.030303
amerindian0.030303
venezuela0.030303
LOWER IN amerindian0.030303
LOWER IN hunter gatherer0.030303
LOWER IN venezuela0.030303
infant0.030303
vellore district0.030303
age 2 months0.030303
india0.030303
el salvador0.030303
wastewater treatment plant0.030303
dentition0.030303
supragingival plaque0.030303
gay0.030303
homosexual0.030303
msm0.030303
msw0.030303
heterosexual0.030303
dense settlement biome0.030303
nouabale-ndoki national park0.020202
republic of congo0.020202
urban biome0.020202
train0.020202
boston0.020202
skin0.020202
madrid0.020202
kingdom of spain0.020202
subway0.020202
columbia0.020202
waste water0.020202
hospital0.020202
xinxiang city prefecture0.020202
river0.020202
water0.020202
fresh water0.020202
depth 0.5m0.020202
jiulong river0.020202
fujian province0.020202
LOWER IN sea water0.020202
LOWER IN starfish0.020202
LOWER IN wild0.020202
LOWER IN coelomic fluid0.020202
LOWER IN patiria pectinifera0.020202
LOWER IN asterias amurensis0.020202
LOWER IN control0.020202
low income0.020202
state of arizona0.020202
age 200.020202
LOWER IN peru0.010101
LOWER IN tunapuco0.010101
peru0.010101
tunapuco0.010101
LOWER IN state of oklahoma0.010101
ngoantet0.010101
LOWER IN yaounde0.010101
LOWER IN ngoantet0.010101
Exp. ID User ID Description Date Region Flag Sequences
404amnonnegatively correlated with hdl levels ( high in low hdl compared to high hdl in colombia city adult feces homo sapiens )2019-01-10v4No1 / -4
682amnondominant city, madrid, kingdom of spain, air2028-03-04v3No1 / -3
550amnondominant city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / -3
550amnon high in starfish wild coelomic fluid asterias amurensis compared to sea water in city hokkaido japan 2019-08-18v4No1 / -3
332amnonhigher in infants treated with Lactobacillus rhamnosus GG probiotics compared to non-treated ( high in probiotics compared to control in homo sapiens infant vellore district city age 2 months india )2018-05-14v4No1 / -3
519amnon high in control compared to dental caries in homo sapiens adult late adult stage city saliva china 2019-06-25v3No1 / -3
550amnondominant city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / -2
550amnon high in asterias amurensis compared to patiria pectinifera in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / -1
332amnoncommon homo sapiens, infant, vellore district, city, age 2 months, india2018-05-14v4No1 / 0
332amnondominant homo sapiens, infant, vellore district, city, age 2 months, india2018-05-14v4No1 / 1
519amnon high in dental caries compared to control in homo sapiens adult late adult stage city saliva china 2019-06-25v3No1 / 2
195amnonhigh freq. in boston subway surfaces (dominant city, urban biome, train, boston)2017-09-07v4No1 / 3
475amnonhigh freq. in air in subway train in hong kong (dominant air, hong kong, city, subway)2019-01-20v4No1 / 3
513amnondominant waste water, hospital, city, xinxiang city prefecture, china2019-03-25v4No1 / 3
620amnondominant village, rural community, homo sapiens, nouabale-ndoki national park, republic of congo, feces2020-05-06v4No1 / 5
594amnondominant adult, cameroon, feces, homo sapiens, city, yaounde2020-03-12v4No1 / 5
404amnon high in male compared to female in feces homo sapiens city adult colombia 2018-11-20v4No1 / 5
475amnonhigh freq. in air next to subway stations in hong kong (dominant air, hong kong, city)2019-01-20v4No1 / 6
404amnon high in high bmi obesity compared to lean body mass low bmi in homo sapiens feces adult colombia city 2018-11-20v4No1 / 6
290amnon high in city compared to rural community small village in homo sapiens feces adult china 2018-02-01v4No1 / 6
393amnondominant homo sapiens, feces, united states of america, adult, state of colorado, city, msm, gay, homosexual2018-11-06v4No1 / 6
276amnondominant feces, homo sapiens, united states of america, city, state of oklahoma, adult2018-01-22v4No1 / 7
550amnoncommon city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 7
550amnon high in starfish coelomic fluid wild patiria pectinifera compared to sea water in city hokkaido japan 2019-08-18v4No1 / 7
519amnondominant homo sapiens, adult, late adult stage, city, saliva, china2019-06-25v3No1 / 8
660amnondominant shuar population, village, rural community, ecuador, feces, homo sapiens2020-09-20v4No1 / 9
404amnonpositively correlated with hdl levels ( high in high hdl compared to low hdl in colombia city adult feces homo sapiens )2019-01-10v4No1 / 9
337amnonhigh freq. in feces of house mice from new york city (dominant mus musculus, house mice, mouse, new york city, united states of america, city)2018-05-18v4No1 / 9
430amnondominant homo sapiens, adult, united states of america, state of arizona, city, age 20, feces2018-12-15v4No1 / 10
519amnondominant homo sapiens, adult, late adult stage, city, dentition, supragingival plaque, china2019-06-25v3No1 / 10
128amnondominant belgium, ivy, hedera ibernica, leaf, city, dense settlement biome2017-04-14v4No1 / 10
404amnondominant homo sapiens, feces, colombia, city, adult2018-11-20v4No1 / 11
550amnondominant sea water, hokkaido, city, japan2019-08-18v4No1 / 12
404amnon high in normal stool compared to hard stool in homo sapiens feces columbia city adult 2018-11-20v4No1 / 13
290amnon high in rural community small village compared to city in homo sapiens feces adult china 2018-02-01v4No1 / 13
393amnondominant homo sapiens, feces, united states of america, adult, state of colorado, city, msw, heterosexual2018-11-06v4No1 / 13
404amnonpositively correlated with fiber intake ( high in plant fiber cell high filber compared to low fiber in homo sapiens feces adult colombia city )2018-11-20v4No1 / 14
53amnondominant homo sapiens, feces, city, el salvador, small village2017-01-21v4No1 / 15
371amnonhigher in saliva of amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in homo sapiens saliva )2018-09-06v4No1 / 16
290amnondominant homo sapiens, feces, adult, city, china2018-02-01v4No1 / 17
53amnondominant lima, homo sapiens, feces, city, shantytown2017-01-21v4No1 / 17
404amnon high in hard stool compared to normal stool in homo sapiens feces columbia city adult 2018-11-20v4No1 / 19
404amnonnegatively correlated with fiber intake ( high in low fiber compared to plant fiber cell high fiber in homo sapiens feces adult colombia city )2018-11-20v4No1 / 24
519amnon high in dentition supragingival plaque compared to saliva in homo sapiens adult late adult stage city china 2019-06-25v3No1 / 48
371amnonlower in saliva of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens saliva )2018-09-06v4No1 / 52
682amnoncommon city, madrid, kingdom of spain, air2028-03-04v3No1 / 60
594amnon high in yaounde city compared to rural community ngoantet in adult cameroon feces homo sapiens 2020-03-12v4No1 / 62
404amnon high in barranquilla bucaramanga municipality of santiago de cali compared to bogota medellin metropolitan area in homo sapiens feces adult colombia city 2018-11-20v4No1 / 63
404amnoncommon homo sapiens, feces, colombia, city, adult2018-11-20v4No1 / 71
404amnon high in lean body mass low bmi compared to high bmi in homo sapiens feces adult colombia city 2018-11-20v4No1 / 76
393amnoncommon homo sapiens, feces, united states of america, adult, state of colorado, city, msw, heterosexual2018-11-06v4No1 / 76
550amnoncommon city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 77
513amnoncommon waste water, hospital, city, xinxiang city prefecture, china2019-03-25v4No1 / 78
430amnoncommon homo sapiens, adult, united states of america, state of arizona, city, age 20, feces2018-12-15v4No1 / 79
660amnonhigher in the cross cutcu population (more modern) comparen to upano valley (less modern) ( high in cross-cutucu compared to upano valley in shuar population village rural community ecuador feces homo sapiens )2020-09-20v4No1 / 80
404amnon high in female compared to male in homo sapiens feces adult colombia city 2018-11-20v4No1 / 80
393amnoncommon homo sapiens, feces, united states of america, adult, state of colorado, city, msm, gay, homosexual2018-11-06v4No1 / 86
519amnoncommon homo sapiens, adult, late adult stage, city, dentition, supragingival plaque, china2019-06-25v3No1 / 96
393amnon high in heterosexual msw compared to gay homosexual msm in homo sapiens feces united states of america adult state of colorado city 2018-11-06v4No1 / 99
276amnoncommon feces, homo sapiens, united states of america, city, state of oklahoma, adult2018-01-22v4No1 / 102
53amnoncommon homo sapiens, feces, lima, city, shantytown2017-01-21v4No1 / 102
195amnoncommon in boston subway surfaces (common city, urban biome, train, boston)2017-09-07v4No1 / 108
393amnon high in gay homosexual msm compared to heterosexual msw in homo sapiens feces united states of america adult state of colorado city 2018-11-06v4No1 / 113
660amnoncommon shuar population, village, rural community, ecuador, feces, homo sapiens2020-09-20v4No1 / 115
660amnonlower in the cross cutcu population (more modern) comparen to upano valley (less modern) ( high in upano valley compared to cross-cutucu in shuar population village rural community ecuador feces homo sapiens )2020-09-20v4No1 / 124
519amnoncommon homo sapiens, adult, late adult stage, city, saliva, china2019-06-25v3No1 / 126
475amnoncommon in air next to subway stations in hong kong (common air, hong kong, city)2019-01-20v4No1 / 139
53amnonhigher in sewer and wastewater influent comapred to feces in low income south america ( high in sewer wastewater treatment plant compared to feces in south america city low income )2017-01-21v4No1 / 140
594amnoncommon adult, cameroon, feces, homo sapiens, city, yaounde2020-03-12v4No1 / 146
53amnoncommon homo sapiens, feces, city, el salvador, small village2017-01-21v4No1 / 147
519amnon high in saliva compared to dentition supragingival plaque in homo sapiens adult late adult stage city china 2019-06-25v3No1 / 151
475amnoncommon in air in subway train in hong kong (common air, hong kong, city, subway)2019-01-20v4No1 / 153
290amnoncommon homo sapiens, feces, adult, city, china2018-02-01v4No1 / 154
337amnonhigher in manhattan compared to queens in feces of house mice from new york city ( high in manhatten region compared to queens region in mus musculus house mice mouse new york city united states of america city )2018-05-18v4No1 / 154
337amnoncommon in feces of house mice from new york city (common mus musculus, house mice, mouse, new york city, united states of america, city)2018-05-18v4No1 / 157
276amnon high in united states of america city state of oklahoma compared to peru small village tunapuco rural community in feces homo sapiens adult 2018-01-22v4No1 / 160
594amnon high in ngoantet rural community compared to city yaounde in homo sapiens feces cameroon adult 2020-03-12v4No1 / 164
550amnon high in sea water compared to starfish wild coelomic fluid patiria pectinifera in city hokkaido japan 2019-08-18v4No1 / 177
53amnonlower in sewer and wastewater treatment plant influent compared to feces in south america ( high in feces homo sapiens compared to sewer wastewater treatment plant in south america city low income )2017-01-21v4No1 / 180
371amnonlower in skin of amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in homo sapiens skin )2018-09-06v4No1 / 187
620amnoncommon village, rural community, homo sapiens, nouabale-ndoki national park, republic of congo, feces2020-05-06v4No1 / 189
53amnon high in shantytown lima compared to el salado small village in homo sapiens feces city 2017-01-21v4No1 / 229
404amnon high in medellin metropolitan area bogota compared to municipality of santiago de cali bucaramanga barranquilla in homo sapiens feces adult colombia city 2018-11-20v4No1 / 229
550amnon high in patiria pectinifera compared to asterias amurensis in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 270
128amnonhigher in ivy leaves from city compared to moor and forest ( high in city dense settlement biome compared to moor forest ecosystem in belgium ivy hedera ibernica leaf )2017-04-14v4No1 / 279
550amnoncommon city, hokkaido, sea water, japan2019-08-18v4No1 / 283
53amnon high in el salvador small village compared to lima shantytown in homo sapiens feces city 2017-01-21v4No1 / 288
254amnonhigher in river when close to populated region compared to downstream ( high in city populated place upstream compared to downstream in river water fresh water depth 0.5m jiulong river fujian province china )2017-11-23v4No1 / 348
337amnonlower in manhattan compared to queens in feces of house mice from new york city ( high in queens region compared to manhatten region in united states of america city mus musculus new york city mouse house mice )2018-05-18v4No1 / 354
550amnon high in sea water compared to starfish asterias amurensis coelomic fluid wild in city hokkaido japan 2019-08-18v4No1 / 381
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in feces homo sapiens )2018-09-06v4No1 / 409
53amnonlower in wastewater plant effluent compared to influent and sewer in south america ( high in sewage influent compared to effluent in south america wastewater treatment plant city )2017-01-21v4No1 / 432
371amnonhigher in amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in feces homo sapiens )2018-09-06v4No1 / 435
128amnoncommon belgium, ivy, hedera ibernica, leaf, city, dense settlement biome2017-04-14v4No1 / 453
254amnonlower in river when close to populated region compared to downstream ( high in downstream compared to upstream city populated place in river water fresh water depth 0.5m jiulong river fujian province china )2017-11-23v4No1 / 460
276amnon high in peru small village tunapuco rural community compared to united states of america city state of oklahoma in feces homo sapiens adult 2018-01-22v4No1 / 461
128amnonhigher in ivy leaves from moor and forest compared to city ( high in moor forest ecosystem compared to city dense settlement biome in belgium ivy hedera ibernica leaf )2017-04-14v4No1 / 517
53amnonhigher in wastewater plant effluent compared to influent and sewer in south america ( high in effluent compared to influent sewage in south america city wastewater treatment plant )2017-01-21v4No1 / 649
371amnonhigher in skin of amerindians compared to western visitors ( high in venezuela hunter gatherer amerindian compared to city united states of america in homo sapiens skin )2018-09-06v4No1 / 846

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