Summary for ontology term: populated place

Number of annotations with term: 97

Annotations:

common ontology terms
term enrichment score
TermScore
city0.897868
hokkaido0.180451
rural community0.156522
colombia0.152866
LOWER IN city0.150470
late adult stage0.141593
starfish0.141593
coelomic fluid0.132231
village0.113208
homo sapiens0.110504
adult0.109233
japan0.104803
small village0.096463
state of colorado0.086331
cameroon0.076190
hong kong0.076190
shuar population0.076190
asterias amurensis0.076190
patiria pectinifera0.076190
house mice0.076190
ivy0.076190
hedera ibernica0.076190
feces0.074964
south america0.073394
new york city0.070796
LOWER IN united states of america0.069565
ecuador0.068376
saliva0.066986
wild0.064257
belgium0.064000
LOWER IN small village0.059406
china0.058716
LOWER IN rural community0.058252
yaounde0.058252
shantytown0.058252
lima0.058252
LOWER IN amerindian0.058252
LOWER IN hunter gatherer0.058252
LOWER IN venezuela0.058252
vellore district0.058252
el salvador0.058252
air0.056738
state of oklahoma0.056604
amerindian0.056604
venezuela0.056604
dense settlement biome0.056604
hunter gatherer0.055046
age 2 months0.055046
gay0.055046
wastewater treatment plant0.053571
msw0.053571
heterosexual0.053571
homosexual0.052174
msm0.052174
india0.050847
supragingival plaque0.050847
leaf0.045198
united states of america0.042027
nouabale-ndoki national park0.039604
republic of congo0.039604
train0.039604
boston0.039604
subway0.039604
columbia0.039604
waste water0.039604
xinxiang city prefecture0.039604
jiulong river0.039604
fujian province0.039604
LOWER IN starfish0.039604
LOWER IN coelomic fluid0.039604
LOWER IN patiria pectinifera0.039604
LOWER IN asterias amurensis0.039604
low income0.039604
age 200.039604
dentition0.038961
depth 0.5m0.038835
infant0.038217
urban biome0.038095
state of arizona0.038095
sea water0.036199
hospital0.036036
LOWER IN sea water0.035398
LOWER IN wild0.034188
river0.033058
fresh water0.029630
mouse0.026230
skin0.025806
mus musculus0.024024
LOWER IN peru0.020202
LOWER IN tunapuco0.020202
tunapuco0.020202
LOWER IN state of oklahoma0.020202
ngoantet0.020202
LOWER IN yaounde0.020202
LOWER IN ngoantet0.020202
LOWER IN el salado0.020202
LOWER IN upano valley0.020202
cross-cutucu0.020202
LOWER IN cross-cutucu0.020202
upano valley0.020202
Fraction of dbbact annotations with this term covered by the query
TermScore
city0.944444
LOWER IN city0.857143
LOWER IN small village0.750000
small village0.750000
village0.666667
LOWER IN peru0.500000
LOWER IN tunapuco0.500000
LOWER IN rural community0.500000
tunapuco0.500000
rural community0.500000
LOWER IN state of oklahoma0.500000
nouabale-ndoki national park0.500000
republic of congo0.500000
cameroon0.500000
ngoantet0.500000
LOWER IN yaounde0.500000
yaounde0.500000
LOWER IN ngoantet0.500000
shantytown0.500000
lima0.500000
LOWER IN el salado0.500000
LOWER IN amerindian0.500000
LOWER IN hunter gatherer0.500000
LOWER IN venezuela0.500000
train0.500000
boston0.500000
hong kong0.500000
subway0.500000
shuar population0.500000
LOWER IN upano valley0.500000
cross-cutucu0.500000
LOWER IN cross-cutucu0.500000
upano valley0.500000
low hdl0.500000
LOWER IN high hdl0.500000
bogota0.500000
LOWER IN municipality of santiago de cali0.500000
LOWER IN bucaramanga0.500000
LOWER IN barranquilla0.500000
barranquilla0.500000
bucaramanga0.500000
municipality of santiago de cali0.500000
LOWER IN bogota0.500000
LOWER IN medellin metropolitan area0.500000
obesity0.500000
high filber0.500000
LOWER IN low fiber0.500000
high hdl0.500000
LOWER IN low hdl0.500000
columbia0.500000
normal stool0.500000
LOWER IN hard stool0.500000
hard stool0.500000
LOWER IN normal stool0.500000
low fiber0.500000
waste water0.500000
xinxiang city prefecture0.500000
jiulong river0.500000
fujian province0.500000
LOWER IN populated place0.500000
populated place0.500000
late adult stage0.500000
starfish0.500000
asterias amurensis0.500000
patiria pectinifera0.500000
LOWER IN starfish0.500000
LOWER IN coelomic fluid0.500000
LOWER IN patiria pectinifera0.500000
LOWER IN asterias amurensis0.500000
vellore district0.500000
el salvador0.500000
LOWER IN lima0.500000
LOWER IN shantytown0.500000
low income0.500000
sewer0.500000
LOWER IN sewer0.500000
LOWER IN influent0.500000
LOWER IN sewage0.500000
sewage0.500000
LOWER IN effluent0.500000
dental caries0.500000
age 200.500000
house mice0.500000
queens region0.500000
LOWER IN manhatten region0.500000
manhatten region0.500000
LOWER IN queens region0.500000
LOWER IN dental caries0.500000
ivy0.500000
hedera ibernica0.500000
LOWER IN moor0.500000
LOWER IN forest ecosystem0.500000
moor0.500000
LOWER IN dense settlement biome0.500000
state of oklahoma0.333333
peru0.333333
amerindian0.333333
venezuela0.333333
medellin metropolitan area0.333333
lean body mass0.333333
Fraction of annotations for the query sequences containing the term
TermScore
city0.855670
homo sapiens0.659794
feces0.505155
adult0.432990
united states of america0.185567
china0.164948
colombia0.123711
hokkaido0.123711
japan0.123711
rural community0.092784
LOWER IN city0.082474
late adult stage0.082474
starfish0.082474
coelomic fluid0.082474
wild0.082474
saliva0.072165
village0.061856
state of colorado0.061856
small village0.051546
LOWER IN united states of america0.041237
cameroon0.041237
air0.041237
hong kong0.041237
shuar population0.041237
ecuador0.041237
sea water0.041237
asterias amurensis0.041237
patiria pectinifera0.041237
south america0.041237
mus musculus0.041237
house mice0.041237
mouse0.041237
new york city0.041237
belgium0.041237
ivy0.041237
hedera ibernica0.041237
leaf0.041237
state of oklahoma0.030928
LOWER IN small village0.030928
LOWER IN rural community0.030928
yaounde0.030928
shantytown0.030928
lima0.030928
hunter gatherer0.030928
amerindian0.030928
venezuela0.030928
LOWER IN amerindian0.030928
LOWER IN hunter gatherer0.030928
LOWER IN venezuela0.030928
infant0.030928
vellore district0.030928
age 2 months0.030928
india0.030928
el salvador0.030928
wastewater treatment plant0.030928
dentition0.030928
supragingival plaque0.030928
gay0.030928
homosexual0.030928
msm0.030928
msw0.030928
heterosexual0.030928
dense settlement biome0.030928
nouabale-ndoki national park0.020619
republic of congo0.020619
urban biome0.020619
train0.020619
boston0.020619
skin0.020619
subway0.020619
columbia0.020619
waste water0.020619
hospital0.020619
xinxiang city prefecture0.020619
river0.020619
water0.020619
fresh water0.020619
depth 0.5m0.020619
jiulong river0.020619
fujian province0.020619
LOWER IN sea water0.020619
LOWER IN starfish0.020619
LOWER IN wild0.020619
LOWER IN coelomic fluid0.020619
LOWER IN patiria pectinifera0.020619
LOWER IN asterias amurensis0.020619
LOWER IN control0.020619
low income0.020619
state of arizona0.020619
age 200.020619
LOWER IN peru0.010309
LOWER IN tunapuco0.010309
peru0.010309
tunapuco0.010309
LOWER IN state of oklahoma0.010309
ngoantet0.010309
LOWER IN yaounde0.010309
LOWER IN ngoantet0.010309
LOWER IN el salado0.010309
LOWER IN upano valley0.010309
Exp. ID User ID Description Date Region Flag Sequences
404amnonnegatively correlated with hdl levels ( high in low hdl compared to high hdl in colombia city adult feces homo sapiens )2019-01-10v4No1 / 3
550amnondominant city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 4
550amnon high in starfish wild coelomic fluid asterias amurensis compared to sea water in city hokkaido japan 2019-08-18v4No1 / 4
332amnonhigher in infants treated with Lactobacillus rhamnosus GG probiotics compared to non-treated ( high in probiotics compared to control in homo sapiens infant vellore district city age 2 months india )2018-05-14v4No1 / 4
519amnon high in control compared to dental caries in homo sapiens adult late adult stage city saliva china 2019-06-25v3No1 / 4
550amnondominant city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 5
550amnon high in asterias amurensis compared to patiria pectinifera in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 6
332amnoncommon homo sapiens, infant, vellore district, city, age 2 months, india2018-05-14v4No1 / 7
332amnondominant homo sapiens, infant, vellore district, city, age 2 months, india2018-05-14v4No1 / 8
519amnon high in dental caries compared to control in homo sapiens adult late adult stage city saliva china 2019-06-25v3No1 / 9
195amnonhigh freq. in boston subway surfaces (dominant city, urban biome, train, boston)2017-09-07v4No1 / 10
475amnonhigh freq. in air in subway train in hong kong (dominant air, hong kong, city, subway)2019-01-20v4No1 / 10
513amnondominant waste water, hospital, city, xinxiang city prefecture, china2019-03-25v4No1 / 10
620amnondominant village, rural community, homo sapiens, nouabale-ndoki national park, republic of congo, feces2020-05-06v4No1 / 12
594amnondominant adult, cameroon, feces, homo sapiens, city, yaounde2020-03-12v4No1 / 12
404amnon high in male compared to female in feces homo sapiens city adult colombia 2018-11-20v4No1 / 12
475amnonhigh freq. in air next to subway stations in hong kong (dominant air, hong kong, city)2019-01-20v4No1 / 13
404amnon high in high bmi obesity compared to lean body mass low bmi in homo sapiens feces adult colombia city 2018-11-20v4No1 / 13
290amnon high in city compared to rural community small village in homo sapiens feces adult china 2018-02-01v4No1 / 13
393amnondominant homo sapiens, feces, united states of america, adult, state of colorado, city, msm, gay, homosexual2018-11-06v4No1 / 13
276amnondominant feces, homo sapiens, united states of america, city, state of oklahoma, adult2018-01-22v4No1 / 14
550amnoncommon city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 14
550amnon high in starfish coelomic fluid wild patiria pectinifera compared to sea water in city hokkaido japan 2019-08-18v4No1 / 14
519amnondominant homo sapiens, adult, late adult stage, city, saliva, china2019-06-25v3No1 / 15
660amnondominant shuar population, village, rural community, ecuador, feces, homo sapiens2020-09-20v4No1 / 16
404amnonpositively correlated with hdl levels ( high in high hdl compared to low hdl in colombia city adult feces homo sapiens )2019-01-10v4No1 / 16
337amnonhigh freq. in feces of house mice from new york city (dominant mus musculus, house mice, mouse, new york city, united states of america, city)2018-05-18v4No1 / 16
430amnondominant homo sapiens, adult, united states of america, state of arizona, city, age 20, feces2018-12-15v4No1 / 17
519amnondominant homo sapiens, adult, late adult stage, city, dentition, supragingival plaque, china2019-06-25v3No1 / 17
128amnondominant belgium, ivy, hedera ibernica, leaf, city, dense settlement biome2017-04-14v4No1 / 17
404amnondominant homo sapiens, feces, colombia, city, adult2018-11-20v4No1 / 18
550amnondominant sea water, hokkaido, city, japan2019-08-18v4No1 / 19
404amnon high in normal stool compared to hard stool in homo sapiens feces columbia city adult 2018-11-20v4No1 / 20
290amnon high in rural community small village compared to city in homo sapiens feces adult china 2018-02-01v4No1 / 20
393amnondominant homo sapiens, feces, united states of america, adult, state of colorado, city, msw, heterosexual2018-11-06v4No1 / 20
404amnonpositively correlated with fiber intake ( high in plant fiber cell high filber compared to low fiber in homo sapiens feces adult colombia city )2018-11-20v4No1 / 21
53amnondominant homo sapiens, feces, city, el salvador, small village2017-01-21v4No1 / 22
371amnonhigher in saliva of amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in homo sapiens saliva )2018-09-06v4No1 / 23
290amnondominant homo sapiens, feces, adult, city, china2018-02-01v4No1 / 24
53amnondominant lima, homo sapiens, feces, city, shantytown2017-01-21v4No1 / 24
404amnon high in hard stool compared to normal stool in homo sapiens feces columbia city adult 2018-11-20v4No1 / 26
404amnonnegatively correlated with fiber intake ( high in low fiber compared to plant fiber cell high fiber in homo sapiens feces adult colombia city )2018-11-20v4No1 / 31
519amnon high in dentition supragingival plaque compared to saliva in homo sapiens adult late adult stage city china 2019-06-25v3No1 / 55
371amnonlower in saliva of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens saliva )2018-09-06v4No1 / 59
594amnon high in yaounde city compared to rural community ngoantet in adult cameroon feces homo sapiens 2020-03-12v4No1 / 69
404amnon high in barranquilla bucaramanga municipality of santiago de cali compared to bogota medellin metropolitan area in homo sapiens feces adult colombia city 2018-11-20v4No1 / 70
404amnoncommon homo sapiens, feces, colombia, city, adult2018-11-20v4No1 / 78
404amnon high in lean body mass low bmi compared to high bmi in homo sapiens feces adult colombia city 2018-11-20v4No1 / 83
393amnoncommon homo sapiens, feces, united states of america, adult, state of colorado, city, msw, heterosexual2018-11-06v4No1 / 83
550amnoncommon city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 84
513amnoncommon waste water, hospital, city, xinxiang city prefecture, china2019-03-25v4No1 / 85
430amnoncommon homo sapiens, adult, united states of america, state of arizona, city, age 20, feces2018-12-15v4No1 / 86
660amnonhigher in the cross cutcu population (more modern) comparen to upano valley (less modern) ( high in cross-cutucu compared to upano valley in shuar population village rural community ecuador feces homo sapiens )2020-09-20v4No1 / 87
404amnon high in female compared to male in homo sapiens feces adult colombia city 2018-11-20v4No1 / 87
393amnoncommon homo sapiens, feces, united states of america, adult, state of colorado, city, msm, gay, homosexual2018-11-06v4No1 / 93
519amnoncommon homo sapiens, adult, late adult stage, city, dentition, supragingival plaque, china2019-06-25v3No1 / 103
393amnon high in heterosexual msw compared to gay homosexual msm in homo sapiens feces united states of america adult state of colorado city 2018-11-06v4No1 / 106
276amnoncommon feces, homo sapiens, united states of america, city, state of oklahoma, adult2018-01-22v4No1 / 109
53amnoncommon homo sapiens, feces, lima, city, shantytown2017-01-21v4No1 / 109
195amnoncommon in boston subway surfaces (common city, urban biome, train, boston)2017-09-07v4No1 / 115
393amnon high in gay homosexual msm compared to heterosexual msw in homo sapiens feces united states of america adult state of colorado city 2018-11-06v4No1 / 120
660amnoncommon shuar population, village, rural community, ecuador, feces, homo sapiens2020-09-20v4No1 / 122
660amnonlower in the cross cutcu population (more modern) comparen to upano valley (less modern) ( high in upano valley compared to cross-cutucu in shuar population village rural community ecuador feces homo sapiens )2020-09-20v4No1 / 131
519amnoncommon homo sapiens, adult, late adult stage, city, saliva, china2019-06-25v3No1 / 133
475amnoncommon in air next to subway stations in hong kong (common air, hong kong, city)2019-01-20v4No1 / 146
53amnonhigher in sewer and wastewater influent comapred to feces in low income south america ( high in sewer wastewater treatment plant compared to feces in south america city low income )2017-01-21v4No1 / 147
594amnoncommon adult, cameroon, feces, homo sapiens, city, yaounde2020-03-12v4No1 / 153
53amnoncommon homo sapiens, feces, city, el salvador, small village2017-01-21v4No1 / 154
519amnon high in saliva compared to dentition supragingival plaque in homo sapiens adult late adult stage city china 2019-06-25v3No1 / 158
475amnoncommon in air in subway train in hong kong (common air, hong kong, city, subway)2019-01-20v4No1 / 160
290amnoncommon homo sapiens, feces, adult, city, china2018-02-01v4No1 / 161
337amnonhigher in manhattan compared to queens in feces of house mice from new york city ( high in manhatten region compared to queens region in mus musculus house mice mouse new york city united states of america city )2018-05-18v4No1 / 161
337amnoncommon in feces of house mice from new york city (common mus musculus, house mice, mouse, new york city, united states of america, city)2018-05-18v4No1 / 164
276amnon high in united states of america city state of oklahoma compared to peru small village tunapuco rural community in feces homo sapiens adult 2018-01-22v4No1 / 167
594amnon high in ngoantet rural community compared to city yaounde in homo sapiens feces cameroon adult 2020-03-12v4No1 / 171
550amnon high in sea water compared to starfish wild coelomic fluid patiria pectinifera in city hokkaido japan 2019-08-18v4No1 / 184
53amnonlower in sewer and wastewater treatment plant influent compared to feces in south america ( high in feces homo sapiens compared to sewer wastewater treatment plant in south america city low income )2017-01-21v4No1 / 187
371amnonlower in skin of amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in homo sapiens skin )2018-09-06v4No1 / 194
620amnoncommon village, rural community, homo sapiens, nouabale-ndoki national park, republic of congo, feces2020-05-06v4No1 / 196
53amnon high in shantytown lima compared to el salado small village in homo sapiens feces city 2017-01-21v4No1 / 236
404amnon high in medellin metropolitan area bogota compared to municipality of santiago de cali bucaramanga barranquilla in homo sapiens feces adult colombia city 2018-11-20v4No1 / 236
550amnon high in patiria pectinifera compared to asterias amurensis in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 277
128amnonhigher in ivy leaves from city compared to moor and forest ( high in city dense settlement biome compared to moor forest ecosystem in belgium ivy hedera ibernica leaf )2017-04-14v4No1 / 286
550amnoncommon city, hokkaido, sea water, japan2019-08-18v4No1 / 290
53amnon high in el salvador small village compared to lima shantytown in homo sapiens feces city 2017-01-21v4No1 / 295
254amnonhigher in river when close to populated region compared to downstream ( high in city populated place upstream compared to downstream in river water fresh water depth 0.5m jiulong river fujian province china )2017-11-23v4No1 / 355
337amnonlower in manhattan compared to queens in feces of house mice from new york city ( high in queens region compared to manhatten region in united states of america city mus musculus new york city mouse house mice )2018-05-18v4No1 / 361
550amnon high in sea water compared to starfish asterias amurensis coelomic fluid wild in city hokkaido japan 2019-08-18v4No1 / 388
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in feces homo sapiens )2018-09-06v4No1 / 416
53amnonlower in wastewater plant effluent compared to influent and sewer in south america ( high in sewage influent compared to effluent in south america wastewater treatment plant city )2017-01-21v4No1 / 439
371amnonhigher in amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in feces homo sapiens )2018-09-06v4No1 / 442
128amnoncommon belgium, ivy, hedera ibernica, leaf, city, dense settlement biome2017-04-14v4No1 / 460
254amnonlower in river when close to populated region compared to downstream ( high in downstream compared to upstream city populated place in river water fresh water depth 0.5m jiulong river fujian province china )2017-11-23v4No1 / 467
276amnon high in peru small village tunapuco rural community compared to united states of america city state of oklahoma in feces homo sapiens adult 2018-01-22v4No1 / 468
128amnonhigher in ivy leaves from moor and forest compared to city ( high in moor forest ecosystem compared to city dense settlement biome in belgium ivy hedera ibernica leaf )2017-04-14v4No1 / 524
53amnonhigher in wastewater plant effluent compared to influent and sewer in south america ( high in effluent compared to influent sewage in south america city wastewater treatment plant )2017-01-21v4No1 / 656
371amnonhigher in skin of amerindians compared to western visitors ( high in venezuela hunter gatherer amerindian compared to city united states of america in homo sapiens skin )2018-09-06v4No1 / 853

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