Summary for ontology term: rattus norvegicus

Number of annotations with term: 44

Annotations:

common ontology terms
term enrichment score
TermScore
rat0.857143
rattus norvegicus0.786885
sprague dawley0.759494
rattus0.352941
male0.307692
ovariectomy0.214286
age 38 weeks0.214286
dahl salt-sensitive0.214286
caecum0.198347
colitis0.176991
switzerland0.176471
research facility0.169811
control diet0.137931
israel0.122449
constipation0.120000
tnbs0.120000
low capacity running strain0.120000
salt0.120000
salt rich diet0.120000
LOWER IN colitis0.113208
china0.084388
LOWER IN control diet0.078431
feces0.066648
LOWER IN control0.060606
control0.060241
female0.049587
LOWER IN constipation0.043478
LOWER IN tnbs0.043478
high capacity running strain0.043478
LOWER IN low capacity running strain0.043478
LOWER IN high capacity running strain0.043478
sedentary0.043478
low physical activity0.043478
LOWER IN exercise0.043478
LOWER IN high physical activity0.043478
exercise0.043478
high physical activity0.043478
LOWER IN sedentary0.043478
LOWER IN low physical activity0.043478
LOWER IN salt0.043478
LOWER IN salt rich diet0.043478
LOWER IN sulfasalazine0.043478
sulfasalazine0.043478
LOWER IN neomycin0.043478
neomycin0.043478
parasitic helminthiasis infectious disease0.042553
hymenolepis diminuta0.042553
LOWER IN parasitic helminthiasis infectious disease0.042553
LOWER IN hymenolepis diminuta0.042553
fructose diet0.042553
fructose0.042553
LOWER IN fructose diet0.042553
LOWER IN fructose0.042553
LOWER IN ampicillin0.041667
ampicillin0.041667
LOWER IN antibiotic0.037736
antibiotic0.037037
united states of america0.030457
Fraction of dbbact annotations with this term covered by the query
TermScore
male1.000000
rattus norvegicus0.857143
sprague dawley0.857143
rat0.750000
constipation0.500000
LOWER IN constipation0.500000
rattus0.500000
LOWER IN tnbs0.500000
tnbs0.500000
ovariectomy0.500000
age 38 weeks0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
sedentary0.500000
low physical activity0.500000
LOWER IN exercise0.500000
LOWER IN high physical activity0.500000
exercise0.500000
high physical activity0.500000
LOWER IN sedentary0.500000
LOWER IN low physical activity0.500000
dahl salt-sensitive0.500000
LOWER IN salt0.500000
LOWER IN salt rich diet0.500000
salt0.500000
salt rich diet0.500000
LOWER IN sulfasalazine0.500000
sulfasalazine0.500000
LOWER IN neomycin0.500000
neomycin0.500000
colitis0.400000
parasitic helminthiasis infectious disease0.333333
hymenolepis diminuta0.333333
LOWER IN parasitic helminthiasis infectious disease0.333333
LOWER IN hymenolepis diminuta0.333333
LOWER IN colitis0.333333
fructose diet0.333333
fructose0.333333
LOWER IN fructose diet0.333333
LOWER IN fructose0.333333
control diet0.285714
LOWER IN control diet0.285714
switzerland0.250000
LOWER IN ampicillin0.250000
ampicillin0.250000
caecum0.136364
israel0.111111
LOWER IN antibiotic0.111111
antibiotic0.100000
research facility0.092784
china0.046512
LOWER IN control0.041322
control0.040984
feces0.034826
female0.030303
united states of america0.016129
Fraction of annotations for the query sequences containing the term
TermScore
rat1.000000
research facility1.000000
feces0.772727
rattus norvegicus0.727273
sprague dawley0.681818
china0.454545
caecum0.363636
united states of america0.272727
rattus0.272727
male0.181818
female0.136364
ovariectomy0.136364
age 38 weeks0.136364
dahl salt-sensitive0.136364
israel0.136364
switzerland0.136364
LOWER IN control0.113636
control0.113636
colitis0.113636
control diet0.090909
constipation0.068182
LOWER IN colitis0.068182
tnbs0.068182
low capacity running strain0.068182
salt0.068182
salt rich diet0.068182
LOWER IN control diet0.045455
LOWER IN constipation0.022727
parasitic helminthiasis infectious disease0.022727
hymenolepis diminuta0.022727
LOWER IN parasitic helminthiasis infectious disease0.022727
LOWER IN hymenolepis diminuta0.022727
LOWER IN tnbs0.022727
high capacity running strain0.022727
LOWER IN low capacity running strain0.022727
LOWER IN high capacity running strain0.022727
sedentary0.022727
low physical activity0.022727
LOWER IN exercise0.022727
LOWER IN high physical activity0.022727
exercise0.022727
high physical activity0.022727
LOWER IN sedentary0.022727
LOWER IN low physical activity0.022727
LOWER IN salt0.022727
LOWER IN salt rich diet0.022727
LOWER IN sulfasalazine0.022727
sulfasalazine0.022727
fructose diet0.022727
fructose0.022727
LOWER IN fructose diet0.022727
LOWER IN fructose0.022727
LOWER IN antibiotic0.022727
LOWER IN neomycin0.022727
LOWER IN ampicillin0.022727
antibiotic0.022727
neomycin0.022727
ampicillin0.022727
Exp. ID User ID Description Date Region Flag Sequences
434amnon high in control diet compared to fructose diet fructose in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 1
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 3
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 5
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 5
221amnonhigher in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in sulfasalazine compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 11
186amnonhighfreq rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 14
300amnonhighfreq rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 15
434amnon high in fructose diet fructose compared to control diet in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 16
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 17
419amnonhighfreq rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 18
419amnonhigh freq. in rats with induced constipation (highfreq rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 20
429amnonhighfreq rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 20
434amnonhighfreq rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 20
442amnonhighfreq rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 21
442amnonhigh freq. in tnbs induced colitis in rat feces (highfreq rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 21
429amnonhighfreq rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 21
221amnonhighfreq rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 21
349amnonhighfreq rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 24
399amnonhighfreq feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 27
429amnonhigher in salt sensitive rates fed salt rich diet compared to control diet ( high in salt salt rich diet compared to control diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 36
419amnon high in constipation compared to control in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 44
221amnonlower in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in colitis compared to sulfasalazine in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 44
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 45
429amnonlower in salt sensitive rates fed salt rich diet compared to control diet ( high in control diet compared to salt salt rich diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 47
442amnonlower in tnbs induced colitis compared to controls ( high in control compared to tnbs colitis in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 49
221amnonhigher in control compared to tnbs induced colitis in rat feces ( high in control compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 49
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 52
442amnonhigher in tnbs induced colitis compared to controls ( high in tnbs colitis compared to control in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 63
221amnonlower in control compared to tnbs induced colitis in rat feces ( high in colitis compared to control in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 68
419amnon high in control compared to constipation in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 70
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 80
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 150
399amnoncommon feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 184
349amnoncommon rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 235
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 238
434amnoncommon rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 238
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 249
419amnoncommon rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 254
419amnoncommon in rats with induced constipation (common rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 300
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 327
442amnoncommon in tnbs induced colitis in rat feces (common rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 360
442amnoncommon rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 378
186amnoncommon rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 407
221amnoncommon rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 470

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