Summary for ontology term: rattus norvegicus

Number of annotations with term: 58

Annotations:

common ontology terms
term enrichment score
TermScore
rat0.846154
rattus norvegicus0.838269
sprague dawley0.818605
male0.409302
caecum0.403361
rattus0.292683
control diet0.182609
israel0.179487
research facility0.178862
age 38 weeks0.171429
dahl salt-sensitive0.171429
ovariectomy0.157895
colitis0.141844
fructose diet0.121212
fructose0.121212
switzerland0.120000
neomycin0.096000
constipation0.093750
tnbs0.093750
low capacity running strain0.093750
salt0.093750
salt rich diet0.093750
induced type 1 diabetes0.093750
ampicillin0.091603
LOWER IN control diet0.090909
LOWER IN colitis0.089552
type i diabetes mellitus0.089552
china0.080591
antibiotic0.078947
feces0.070073
LOWER IN fructose diet0.064516
LOWER IN fructose0.064516
control0.064000
LOWER IN control0.059701
female0.037267
LOWER IN constipation0.033333
LOWER IN tnbs0.033333
high capacity running strain0.033333
LOWER IN low capacity running strain0.033333
LOWER IN high capacity running strain0.033333
LOWER IN exercise0.033333
exercise0.033333
LOWER IN salt0.033333
LOWER IN salt rich diet0.033333
LOWER IN sulfasalazine0.033333
sulfasalazine0.033333
LOWER IN induced type 1 diabetes0.033333
LOWER IN neomycin0.033333
parasitic helminthiasis infectious disease0.032787
hymenolepis diminuta0.032787
LOWER IN parasitic helminthiasis infectious disease0.032787
LOWER IN hymenolepis diminuta0.032787
sedentary0.032787
low physical activity0.032787
LOWER IN high physical activity0.032787
LOWER IN sedentary0.032787
LOWER IN low physical activity0.032787
LOWER IN type i diabetes mellitus0.032787
LOWER IN ampicillin0.032258
high physical activity0.031746
LOWER IN antibiotic0.028986
united states of america0.026726
Fraction of dbbact annotations with this term covered by the query
TermScore
rattus norvegicus0.888889
sprague dawley0.888889
caecum0.750000
rat0.733333
neomycin0.666667
constipation0.500000
LOWER IN constipation0.500000
rattus0.500000
LOWER IN tnbs0.500000
tnbs0.500000
age 38 weeks0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
LOWER IN exercise0.500000
exercise0.500000
dahl salt-sensitive0.500000
LOWER IN salt0.500000
LOWER IN salt rich diet0.500000
salt0.500000
salt rich diet0.500000
LOWER IN sulfasalazine0.500000
sulfasalazine0.500000
LOWER IN induced type 1 diabetes0.500000
induced type 1 diabetes0.500000
LOWER IN fructose diet0.500000
LOWER IN fructose0.500000
fructose diet0.500000
fructose0.500000
LOWER IN neomycin0.500000
male0.444444
colitis0.400000
ampicillin0.400000
control diet0.375000
LOWER IN control diet0.375000
parasitic helminthiasis infectious disease0.333333
hymenolepis diminuta0.333333
LOWER IN parasitic helminthiasis infectious disease0.333333
LOWER IN hymenolepis diminuta0.333333
LOWER IN colitis0.333333
ovariectomy0.333333
sedentary0.333333
low physical activity0.333333
LOWER IN high physical activity0.333333
LOWER IN sedentary0.333333
LOWER IN low physical activity0.333333
LOWER IN type i diabetes mellitus0.333333
type i diabetes mellitus0.333333
LOWER IN ampicillin0.250000
high physical activity0.200000
antibiotic0.166667
israel0.142857
switzerland0.142857
research facility0.098214
LOWER IN antibiotic0.090909
china0.044643
LOWER IN control0.041958
control0.041667
feces0.036585
female0.022727
united states of america0.014286
Fraction of annotations for the query sequences containing the term
TermScore
rat1.000000
research facility1.000000
feces0.827586
rattus norvegicus0.793103
sprague dawley0.758621
china0.413793
male0.379310
caecum0.275862
israel0.241379
united states of america0.206897
rattus0.206897
control0.137931
control diet0.120690
LOWER IN control0.103448
female0.103448
ovariectomy0.103448
age 38 weeks0.103448
dahl salt-sensitive0.103448
switzerland0.103448
colitis0.086207
fructose diet0.068966
fructose0.068966
constipation0.051724
LOWER IN colitis0.051724
tnbs0.051724
low capacity running strain0.051724
salt0.051724
salt rich diet0.051724
LOWER IN control diet0.051724
induced type 1 diabetes0.051724
type i diabetes mellitus0.051724
antibiotic0.051724
neomycin0.051724
ampicillin0.051724
LOWER IN fructose diet0.034483
LOWER IN fructose0.034483
LOWER IN constipation0.017241
parasitic helminthiasis infectious disease0.017241
hymenolepis diminuta0.017241
LOWER IN parasitic helminthiasis infectious disease0.017241
LOWER IN hymenolepis diminuta0.017241
LOWER IN tnbs0.017241
high capacity running strain0.017241
LOWER IN low capacity running strain0.017241
LOWER IN high capacity running strain0.017241
sedentary0.017241
low physical activity0.017241
LOWER IN exercise0.017241
LOWER IN high physical activity0.017241
exercise0.017241
high physical activity0.017241
LOWER IN sedentary0.017241
LOWER IN low physical activity0.017241
LOWER IN salt0.017241
LOWER IN salt rich diet0.017241
LOWER IN sulfasalazine0.017241
sulfasalazine0.017241
LOWER IN type i diabetes mellitus0.017241
LOWER IN induced type 1 diabetes0.017241
LOWER IN antibiotic0.017241
LOWER IN neomycin0.017241
LOWER IN ampicillin0.017241
Exp. ID User ID Description Date Region Flag Sequences
434amnon high in control diet compared to fructose diet fructose in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 0
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 2
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 4
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 4
221amnonhigher in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in sulfasalazine compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 10
186amnondominant rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 13
300amnondominant rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 14
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 14
584amnondominant male, rattus norvegicus, rat, sprague dawley, research facility, feces, control, china2020-01-31v3No1 / 15
434amnon high in fructose diet fructose compared to control diet in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 15
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 15
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 16
419amnondominant rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 17
419amnonhigh freq. in rats with induced constipation (dominant rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 19
429amnondominant rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 19
434amnondominant rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 19
442amnondominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 20
442amnonhigh freq. in tnbs induced colitis in rat feces (dominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 20
429amnondominant rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 20
221amnondominant rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 20
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, control diet2020-02-09v4No1 / 20
349amnondominant rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 23
584amnondominant male, rattus norvegicus, rat, sprague dawley, research facility, feces, china, type i diabetes mellitus, induced type 1 diabetes2020-01-31v3No1 / 25
399amnondominant feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 26
584amnon high in induced type 1 diabetes type i diabetes mellitus compared to control in male rattus norvegicus rat sprague dawley research facility feces 2020-01-31v3No1 / 26
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, fructose diet, fructose2020-02-09v4No1 / 26
429amnonhigher in salt sensitive rates fed salt rich diet compared to control diet ( high in salt salt rich diet compared to control diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 35
584amnon high in control compared to type i diabetes mellitus induced type 1 diabetes in male rattus norvegicus rat sprague dawley research facility feces 2020-01-31v3No1 / 37
419amnon high in constipation compared to control in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 43
221amnonlower in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in colitis compared to sulfasalazine in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 43
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 44
429amnonlower in salt sensitive rates fed salt rich diet compared to control diet ( high in control diet compared to salt salt rich diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 46
442amnonlower in tnbs induced colitis compared to controls ( high in control compared to tnbs colitis in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 48
221amnonhigher in control compared to tnbs induced colitis in rat feces ( high in control compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 48
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 51
586amnon high in control diet compared to fructose diet fructose in rattus norvegicus rat sprague dawley research facility male israel feces 2020-02-09v4No1 / 60
442amnonhigher in tnbs induced colitis compared to controls ( high in tnbs colitis compared to control in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 62
221amnonlower in control compared to tnbs induced colitis in rat feces ( high in colitis compared to control in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 67
419amnon high in control compared to constipation in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 69
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 79
586amnon high in fructose diet fructose compared to control diet in rattus norvegicus rat sprague dawley research facility male israel feces 2020-02-09v4No1 / 129
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 149
399amnoncommon feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 183
584amnoncommon male, rattus norvegicus, rat, sprague dawley, research facility, feces, china, type i diabetes mellitus, induced type 1 diabetes2020-01-31v3No1 / 201
584amnoncommon male, rattus norvegicus, rat, sprague dawley, research facility, feces, control, china2020-01-31v3No1 / 220
349amnoncommon rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 234
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 237
434amnoncommon rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 237
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, control diet2020-02-09v4No1 / 240
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 248
419amnoncommon rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 253
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, fructose diet, fructose2020-02-09v4No1 / 286
419amnoncommon in rats with induced constipation (common rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 299
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 326
442amnoncommon in tnbs induced colitis in rat feces (common rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 359
442amnoncommon rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 377
186amnoncommon rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 406
221amnoncommon rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 469

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