Summary for ontology term: rattus norvegicus

Number of annotations with term: 66

Annotations:

common ontology terms
term enrichment score
TermScore
rat0.845815
rattus norvegicus0.840215
sprague dawley0.785579
rattus0.266667
research facility0.166008
age 38 weeks0.153846
dahl salt-sensitive0.153846
male0.153846
israel0.151351
ovariectomy0.142857
control diet0.141892
caecum0.129380
colitis0.127389
fructose diet0.108108
fructose0.108108
switzerland0.105263
tnbs0.083333
constipation0.083333
low capacity running strain0.083333
salt0.083333
salt rich diet0.083333
induced type 1 diabetes0.083333
neomycin0.083333
ampicillin0.081633
LOWER IN colitis0.080000
city of boston0.080000
type i diabetes mellitus0.076923
LOWER IN control diet0.075000
china0.070493
commonwealth of massachusetts0.068966
new york city0.068966
antibiotic0.068966
feces0.063447
state of new york0.062500
LOWER IN fructose diet0.057143
LOWER IN fructose0.057143
control0.054176
female0.051613
LOWER IN control0.050847
sichuan province0.048780
female organism0.044444
wild0.043478
oral cavity0.042553
united states of america0.031291
LOWER IN tnbs0.029412
LOWER IN city of boston0.029412
LOWER IN commonwealth of massachusetts0.029412
LOWER IN state of new york0.029412
LOWER IN new york city0.029412
LOWER IN constipation0.029412
high capacity running strain0.029412
LOWER IN low capacity running strain0.029412
LOWER IN high capacity running strain0.029412
LOWER IN exercise0.029412
exercise0.029412
LOWER IN salt0.029412
LOWER IN salt rich diet0.029412
LOWER IN sulfasalazine0.029412
sulfasalazine0.029412
LOWER IN induced type 1 diabetes0.029412
hymenolepis diminuta0.028986
LOWER IN hymenolepis diminuta0.028986
sedentary0.028986
low physical activity0.028986
LOWER IN high physical activity0.028986
LOWER IN sedentary0.028986
LOWER IN low physical activity0.028986
LOWER IN neomycin0.028986
parasitic helminthiasis infectious disease0.028571
LOWER IN parasitic helminthiasis infectious disease0.028571
LOWER IN type i diabetes mellitus0.028571
LOWER IN ampicillin0.028571
high physical activity0.028169
LOWER IN research facility0.027397
LOWER IN wild0.025316
LOWER IN antibiotic0.025316
Fraction of dbbact annotations with this term covered by the query
TermScore
rattus norvegicus0.900000
sprague dawley0.900000
rat0.750000
rattus0.500000
LOWER IN tnbs0.500000
tnbs0.500000
LOWER IN city of boston0.500000
LOWER IN commonwealth of massachusetts0.500000
LOWER IN state of new york0.500000
LOWER IN new york city0.500000
constipation0.500000
LOWER IN constipation0.500000
age 38 weeks0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
LOWER IN exercise0.500000
exercise0.500000
dahl salt-sensitive0.500000
LOWER IN salt0.500000
LOWER IN salt rich diet0.500000
salt0.500000
salt rich diet0.500000
LOWER IN sulfasalazine0.500000
sulfasalazine0.500000
LOWER IN induced type 1 diabetes0.500000
induced type 1 diabetes0.500000
LOWER IN fructose diet0.500000
LOWER IN fructose0.500000
fructose diet0.500000
fructose0.500000
neomycin0.500000
colitis0.400000
ampicillin0.400000
hymenolepis diminuta0.333333
LOWER IN hymenolepis diminuta0.333333
LOWER IN colitis0.333333
city of boston0.333333
ovariectomy0.333333
sedentary0.333333
low physical activity0.333333
LOWER IN high physical activity0.333333
LOWER IN sedentary0.333333
LOWER IN low physical activity0.333333
LOWER IN neomycin0.333333
parasitic helminthiasis infectious disease0.250000
LOWER IN parasitic helminthiasis infectious disease0.250000
LOWER IN type i diabetes mellitus0.250000
type i diabetes mellitus0.250000
LOWER IN ampicillin0.250000
control diet0.214286
LOWER IN control diet0.214286
high physical activity0.200000
commonwealth of massachusetts0.142857
new york city0.142857
LOWER IN research facility0.142857
antibiotic0.142857
sichuan province0.125000
switzerland0.125000
israel0.117647
male0.100000
state of new york0.100000
research facility0.090909
caecum0.088235
female organism0.083333
LOWER IN wild0.076923
LOWER IN antibiotic0.076923
oral cavity0.071429
wild0.041667
china0.038710
LOWER IN control0.035294
control0.034884
feces0.033003
female0.032787
united states of america0.016598
Fraction of annotations for the query sequences containing the term
TermScore
rat0.969697
research facility0.954545
feces0.818182
rattus norvegicus0.787879
sprague dawley0.696970
china0.393939
male0.333333
united states of america0.272727
caecum0.242424
israel0.212121
rattus0.181818
control0.121212
female0.121212
control diet0.106061
LOWER IN control0.090909
ovariectomy0.090909
age 38 weeks0.090909
dahl salt-sensitive0.090909
switzerland0.090909
colitis0.075758
fructose diet0.060606
fructose0.060606
LOWER IN colitis0.045455
tnbs0.045455
city of boston0.045455
commonwealth of massachusetts0.045455
state of new york0.045455
new york city0.045455
wild0.045455
constipation0.045455
low capacity running strain0.045455
salt0.045455
salt rich diet0.045455
LOWER IN control diet0.045455
induced type 1 diabetes0.045455
type i diabetes mellitus0.045455
antibiotic0.045455
neomycin0.045455
ampicillin0.045455
sichuan province0.030303
oral cavity0.030303
female organism0.030303
LOWER IN fructose diet0.030303
LOWER IN fructose0.030303
parasitic helminthiasis infectious disease0.015152
hymenolepis diminuta0.015152
LOWER IN parasitic helminthiasis infectious disease0.015152
LOWER IN hymenolepis diminuta0.015152
LOWER IN tnbs0.015152
LOWER IN research facility0.015152
LOWER IN city of boston0.015152
LOWER IN commonwealth of massachusetts0.015152
LOWER IN wild0.015152
LOWER IN state of new york0.015152
LOWER IN new york city0.015152
LOWER IN constipation0.015152
high capacity running strain0.015152
LOWER IN low capacity running strain0.015152
LOWER IN high capacity running strain0.015152
sedentary0.015152
low physical activity0.015152
LOWER IN exercise0.015152
LOWER IN high physical activity0.015152
exercise0.015152
high physical activity0.015152
LOWER IN sedentary0.015152
LOWER IN low physical activity0.015152
LOWER IN salt0.015152
LOWER IN salt rich diet0.015152
LOWER IN sulfasalazine0.015152
sulfasalazine0.015152
LOWER IN type i diabetes mellitus0.015152
LOWER IN induced type 1 diabetes0.015152
LOWER IN antibiotic0.015152
LOWER IN neomycin0.015152
LOWER IN ampicillin0.015152
Exp. ID User ID Description Date Region Flag Sequences
434amnon high in control diet compared to fructose diet fructose in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 1
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 3
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 5
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 5
221amnonhigher in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in sulfasalazine compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 11
186amnondominant rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 14
300amnondominant rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 15
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 15
584amnondominant male, rattus norvegicus, rat, sprague dawley, research facility, feces, control, china2020-01-31v3No1 / 16
434amnon high in fructose diet fructose compared to control diet in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 16
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 16
759amnondominant state of new york, new york city, wild, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 17
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 17
419amnondominant rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 18
419amnonhigh freq. in rats with induced constipation (dominant rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 20
697amnondominant sichuan province, china, oral cavity, research facility, female organism, sprague dawley, female2028-03-29v3No1 / 20
429amnondominant rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 20
434amnondominant rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 20
442amnondominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 21
442amnonhigh freq. in tnbs induced colitis in rat feces (dominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 21
759amnondominant city of boston, commonwealth of massachusetts, research facility, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 21
429amnondominant rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 21
221amnondominant rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 21
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, control diet2020-02-09v4No1 / 21
349amnondominant rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 24
584amnondominant male, rattus norvegicus, rat, sprague dawley, research facility, feces, china, type i diabetes mellitus, induced type 1 diabetes2020-01-31v3No1 / 26
399amnondominant feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 27
584amnon high in induced type 1 diabetes type i diabetes mellitus compared to control in male rattus norvegicus rat sprague dawley research facility feces 2020-01-31v3No1 / 27
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, fructose diet, fructose2020-02-09v4No1 / 27
429amnonhigher in salt sensitive rates fed salt rich diet compared to control diet ( high in salt salt rich diet compared to control diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 36
584amnon high in control compared to type i diabetes mellitus induced type 1 diabetes in male rattus norvegicus rat sprague dawley research facility feces 2020-01-31v3No1 / 38
419amnon high in constipation compared to control in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 44
221amnonlower in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in colitis compared to sulfasalazine in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 44
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 45
429amnonlower in salt sensitive rates fed salt rich diet compared to control diet ( high in control diet compared to salt salt rich diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 47
442amnonlower in tnbs induced colitis compared to controls ( high in control compared to tnbs colitis in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 49
221amnonhigher in control compared to tnbs induced colitis in rat feces ( high in control compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 49
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 52
586amnon high in control diet compared to fructose diet fructose in rattus norvegicus rat sprague dawley research facility male israel feces 2020-02-09v4No1 / 61
442amnonhigher in tnbs induced colitis compared to controls ( high in tnbs colitis compared to control in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 63
221amnonlower in control compared to tnbs induced colitis in rat feces ( high in colitis compared to control in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 68
419amnon high in control compared to constipation in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 70
697amnoncommon sichuan province, china, oral cavity, research facility, female organism, sprague dawley, female2028-03-29v3No1 / 73
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 80
759amnoncommon state of new york, new york city, wild, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 94
759amnon high in wild new york city state of new york compared to research facility city of boston commonwealth of massachusetts in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 96
586amnon high in fructose diet fructose compared to control diet in rattus norvegicus rat sprague dawley research facility male israel feces 2020-02-09v4No1 / 130
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 150
759amnoncommon city of boston, commonwealth of massachusetts, research facility, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 179
399amnoncommon feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 184
584amnoncommon male, rattus norvegicus, rat, sprague dawley, research facility, feces, china, type i diabetes mellitus, induced type 1 diabetes2020-01-31v3No1 / 202
759amnon high in commonwealth of massachusetts city of boston research facility compared to wild state of new york new york city in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 217
584amnoncommon male, rattus norvegicus, rat, sprague dawley, research facility, feces, control, china2020-01-31v3No1 / 221
349amnoncommon rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 235
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 238
434amnoncommon rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 238
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, control diet2020-02-09v4No1 / 241
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 249
419amnoncommon rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 254
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, fructose diet, fructose2020-02-09v4No1 / 287
419amnoncommon in rats with induced constipation (common rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 300
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 327
442amnoncommon in tnbs induced colitis in rat feces (common rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 360
442amnoncommon rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 378
186amnoncommon rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 407
221amnoncommon rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 470

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