Summary for ontology term: rattus norvegicus

Number of annotations with term: 60

Annotations:

common ontology terms
term enrichment score
TermScore
rat0.833987
sprague dawley0.828000
rattus norvegicus0.823266
male0.401826
caecum0.311688
rattus0.285714
research facility0.172662
israel0.169697
age 38 weeks0.166667
dahl salt-sensitive0.166667
control diet0.163424
ovariectomy0.153846
colitis0.137931
fructose diet0.117647
fructose0.117647
switzerland0.117647
constipation0.090909
tnbs0.090909
low capacity running strain0.090909
salt0.090909
salt rich diet0.090909
induced type 1 diabetes0.090909
neomycin0.090909
ampicillin0.088889
LOWER IN colitis0.086957
type i diabetes mellitus0.086957
china0.085809
LOWER IN control diet0.084507
antibiotic0.074074
feces0.063325
LOWER IN fructose diet0.062500
LOWER IN fructose0.062500
control0.058252
female0.055556
female organism0.055556
LOWER IN control0.054545
sichuan province0.052632
oral cavity0.050000
LOWER IN constipation0.032258
LOWER IN tnbs0.032258
high capacity running strain0.032258
LOWER IN low capacity running strain0.032258
LOWER IN high capacity running strain0.032258
LOWER IN exercise0.032258
exercise0.032258
LOWER IN salt0.032258
LOWER IN salt rich diet0.032258
LOWER IN sulfasalazine0.032258
sulfasalazine0.032258
LOWER IN induced type 1 diabetes0.032258
hymenolepis diminuta0.031746
LOWER IN hymenolepis diminuta0.031746
sedentary0.031746
low physical activity0.031746
LOWER IN high physical activity0.031746
LOWER IN sedentary0.031746
LOWER IN low physical activity0.031746
LOWER IN type i diabetes mellitus0.031746
LOWER IN neomycin0.031746
parasitic helminthiasis infectious disease0.031250
LOWER IN parasitic helminthiasis infectious disease0.031250
LOWER IN ampicillin0.031250
high physical activity0.030769
LOWER IN antibiotic0.027397
united states of america0.025000
Fraction of dbbact annotations with this term covered by the query
TermScore
sprague dawley0.900000
rattus norvegicus0.888889
rat0.733333
constipation0.500000
LOWER IN constipation0.500000
rattus0.500000
LOWER IN tnbs0.500000
tnbs0.500000
age 38 weeks0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
LOWER IN exercise0.500000
exercise0.500000
dahl salt-sensitive0.500000
LOWER IN salt0.500000
LOWER IN salt rich diet0.500000
salt0.500000
salt rich diet0.500000
LOWER IN sulfasalazine0.500000
sulfasalazine0.500000
LOWER IN induced type 1 diabetes0.500000
induced type 1 diabetes0.500000
LOWER IN fructose diet0.500000
LOWER IN fructose0.500000
fructose diet0.500000
fructose0.500000
neomycin0.500000
male0.444444
colitis0.400000
ampicillin0.400000
caecum0.375000
hymenolepis diminuta0.333333
LOWER IN hymenolepis diminuta0.333333
LOWER IN colitis0.333333
ovariectomy0.333333
sedentary0.333333
low physical activity0.333333
LOWER IN high physical activity0.333333
LOWER IN sedentary0.333333
LOWER IN low physical activity0.333333
LOWER IN type i diabetes mellitus0.333333
type i diabetes mellitus0.333333
LOWER IN neomycin0.333333
control diet0.272727
LOWER IN control diet0.272727
parasitic helminthiasis infectious disease0.250000
LOWER IN parasitic helminthiasis infectious disease0.250000
LOWER IN ampicillin0.250000
high physical activity0.200000
female organism0.166667
switzerland0.142857
antibiotic0.142857
israel0.133333
sichuan province0.125000
oral cavity0.100000
research facility0.094488
LOWER IN antibiotic0.076923
china0.047619
LOWER IN control0.037500
control0.037267
female0.035088
feces0.032967
united states of america0.013333
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
rat0.966667
feces0.800000
rattus norvegicus0.766667
sprague dawley0.766667
china0.433333
male0.366667
caecum0.266667
israel0.233333
united states of america0.200000
rattus0.200000
control0.133333
female0.133333
control diet0.116667
LOWER IN control0.100000
ovariectomy0.100000
age 38 weeks0.100000
dahl salt-sensitive0.100000
switzerland0.100000
colitis0.083333
fructose diet0.066667
fructose0.066667
constipation0.050000
LOWER IN colitis0.050000
tnbs0.050000
low capacity running strain0.050000
salt0.050000
salt rich diet0.050000
LOWER IN control diet0.050000
induced type 1 diabetes0.050000
type i diabetes mellitus0.050000
antibiotic0.050000
neomycin0.050000
ampicillin0.050000
LOWER IN fructose diet0.033333
LOWER IN fructose0.033333
sichuan province0.033333
oral cavity0.033333
female organism0.033333
LOWER IN constipation0.016667
parasitic helminthiasis infectious disease0.016667
hymenolepis diminuta0.016667
LOWER IN parasitic helminthiasis infectious disease0.016667
LOWER IN hymenolepis diminuta0.016667
LOWER IN tnbs0.016667
high capacity running strain0.016667
LOWER IN low capacity running strain0.016667
LOWER IN high capacity running strain0.016667
sedentary0.016667
low physical activity0.016667
LOWER IN exercise0.016667
LOWER IN high physical activity0.016667
exercise0.016667
high physical activity0.016667
LOWER IN sedentary0.016667
LOWER IN low physical activity0.016667
LOWER IN salt0.016667
LOWER IN salt rich diet0.016667
LOWER IN sulfasalazine0.016667
sulfasalazine0.016667
LOWER IN type i diabetes mellitus0.016667
LOWER IN induced type 1 diabetes0.016667
LOWER IN antibiotic0.016667
LOWER IN neomycin0.016667
LOWER IN ampicillin0.016667
Exp. ID User ID Description Date Region Flag Sequences
434amnon high in control diet compared to fructose diet fructose in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / -7
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / -5
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / -3
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / -3
221amnonhigher in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in sulfasalazine compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 3
186amnondominant rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 6
300amnondominant rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 7
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 7
584amnondominant male, rattus norvegicus, rat, sprague dawley, research facility, feces, control, china2020-01-31v3No1 / 8
434amnon high in fructose diet fructose compared to control diet in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 8
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 8
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 9
419amnondominant rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 10
419amnonhigh freq. in rats with induced constipation (dominant rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 12
429amnondominant rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 12
434amnondominant rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 12
442amnondominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 13
442amnonhigh freq. in tnbs induced colitis in rat feces (dominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 13
429amnondominant rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 13
221amnondominant rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 13
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, control diet2020-02-09v4No1 / 13
697amnondominant sichuan province, china, oral cavity, research facility, female organism, sprague dawley, female2028-03-29v3No1 / 13
349amnondominant rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 16
584amnondominant male, rattus norvegicus, rat, sprague dawley, research facility, feces, china, type i diabetes mellitus, induced type 1 diabetes2020-01-31v3No1 / 18
399amnondominant feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 19
584amnon high in induced type 1 diabetes type i diabetes mellitus compared to control in male rattus norvegicus rat sprague dawley research facility feces 2020-01-31v3No1 / 19
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, fructose diet, fructose2020-02-09v4No1 / 19
429amnonhigher in salt sensitive rates fed salt rich diet compared to control diet ( high in salt salt rich diet compared to control diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 28
584amnon high in control compared to type i diabetes mellitus induced type 1 diabetes in male rattus norvegicus rat sprague dawley research facility feces 2020-01-31v3No1 / 30
419amnon high in constipation compared to control in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 36
221amnonlower in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in colitis compared to sulfasalazine in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 36
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 37
429amnonlower in salt sensitive rates fed salt rich diet compared to control diet ( high in control diet compared to salt salt rich diet in rat rattus norvegicus dahl salt-sensitive feces israel research facility )2018-12-13v4No1 / 39
442amnonlower in tnbs induced colitis compared to controls ( high in control compared to tnbs colitis in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 41
221amnonhigher in control compared to tnbs induced colitis in rat feces ( high in control compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 41
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 44
586amnon high in control diet compared to fructose diet fructose in rattus norvegicus rat sprague dawley research facility male israel feces 2020-02-09v4No1 / 53
442amnonhigher in tnbs induced colitis compared to controls ( high in tnbs colitis compared to control in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 55
221amnonlower in control compared to tnbs induced colitis in rat feces ( high in colitis compared to control in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 60
419amnon high in control compared to constipation in rat rattus norvegicus sprague dawley research facility feces china 2018-12-02v4No1 / 62
697amnoncommon sichuan province, china, oral cavity, research facility, female organism, sprague dawley, female2028-03-29v3No1 / 66
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 72
586amnon high in fructose diet fructose compared to control diet in rattus norvegicus rat sprague dawley research facility male israel feces 2020-02-09v4No1 / 122
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 142
399amnoncommon feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 176
584amnoncommon male, rattus norvegicus, rat, sprague dawley, research facility, feces, china, type i diabetes mellitus, induced type 1 diabetes2020-01-31v3No1 / 194
584amnoncommon male, rattus norvegicus, rat, sprague dawley, research facility, feces, control, china2020-01-31v3No1 / 213
349amnoncommon rattus, rat, feces, research facility, sprague dawley, male, china2018-07-29v4No1 / 227
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 230
434amnoncommon rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 230
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, control diet2020-02-09v4No1 / 233
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, salt rich diet, salt2018-12-13v4No1 / 241
419amnoncommon rat, rattus norvegicus, sprague dawley, research facility, feces, china2018-12-02v4No1 / 246
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, fructose diet, fructose2020-02-09v4No1 / 279
419amnoncommon in rats with induced constipation (common rat, rattus norvegicus, sprague dawley, research facility, feces, constipation, china)2018-12-02v4No1 / 292
429amnoncommon rat, rattus norvegicus, dahl salt-sensitive, feces, israel, research facility, control diet2018-12-13v4No1 / 319
442amnoncommon in tnbs induced colitis in rat feces (common rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 352
442amnoncommon rattus norvegicus, rat, sprague dawley, male, research facility, feces, china2019-01-06v4No1 / 370
186amnoncommon rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 399
221amnoncommon rattus, sprague dawley, rat, feces, research facility, china2017-10-25v4No1 / 462

Problems / suggestions? Please email info AT dbbact DOT org