Summary for ontology term: root endosphere

Number of annotations with term: 18

Annotations:

common ontology terms
term enrichment score
TermScore
root endosphere0.836066
cannabis sativa0.526316
canada0.416667
agave0.400000
root0.330097
guanajuato0.307692
mexico0.210526
desert0.200000
propagation stage0.181818
agave deserti0.181818
agave salmiana0.181818
agave tequiliana0.181818
pre-vegetative stage0.181818
early flowering stage0.181818
late flowering stage0.181818
minas gerais state0.181818
campos rupestres0.181818
barbacenia macrantha0.181818
seedling0.153846
cultivated environment0.117647
LOWER IN root endosphere0.100000
brazil0.083333
state of california0.071429
LOWER IN root0.068966
farm0.067114
LOWER IN rhizosphere0.062500
rhizosphere0.039216
Fraction of dbbact annotations with this term covered by the query
TermScore
root endosphere0.750000
propagation stage0.500000
cannabis sativa0.500000
agave0.500000
agave deserti0.500000
agave salmiana0.500000
guanajuato0.500000
agave tequiliana0.500000
pre-vegetative stage0.500000
early flowering stage0.500000
late flowering stage0.500000
LOWER IN root endosphere0.500000
minas gerais state0.500000
campos rupestres0.500000
barbacenia macrantha0.500000
canada0.333333
seedling0.250000
root0.200000
mexico0.200000
desert0.142857
cultivated environment0.125000
LOWER IN root0.090909
LOWER IN rhizosphere0.071429
brazil0.066667
state of california0.052632
farm0.035714
rhizosphere0.030303
Fraction of annotations for the query sequences containing the term
TermScore
root0.944444
root endosphere0.944444
canada0.555556
farm0.555556
cannabis sativa0.555556
agave0.333333
desert0.333333
mexico0.222222
guanajuato0.222222
seedling0.111111
propagation stage0.111111
agave deserti0.111111
state of california0.111111
agave salmiana0.111111
agave tequiliana0.111111
cultivated environment0.111111
pre-vegetative stage0.111111
early flowering stage0.111111
late flowering stage0.111111
minas gerais state0.111111
campos rupestres0.111111
brazil0.111111
barbacenia macrantha0.111111
LOWER IN root endosphere0.055556
LOWER IN root0.055556
rhizosphere0.055556
LOWER IN rhizosphere0.055556
Exp. ID User ID Description Date Region Flag Sequences
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 6
360amnondominant agave, desert, root endosphere, agave deserti, state of california, root2018-08-21v4No1 / 13
360amnondominant agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root2018-08-21v4No1 / 13
618amnondominant pre-vegetative stage, canada, farm, root, root endosphere, cannabis sativa2020-05-04v4No1 / 13
618amnondominant late flowering stage, canada, farm, root, root endosphere, cannabis sativa2020-05-04v4No1 / 15
360amnondominant agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v4No1 / 17
618amnondominant canada, farm, seedling, propagation stage, root, root endosphere, cannabis sativa2020-05-04v4No1 / 21
618amnondominant early flowering stage, canada, farm, root, root endosphere, cannabis sativa2020-05-04v4No1 / 24
618amnoncommon canada, farm, seedling, propagation stage, root, root endosphere, cannabis sativa2020-05-04v4No1 / 44
360amnoncommon agave, desert, root endosphere, agave deserti, state of california, root2018-08-21v4No1 / 52
360amnoncommon agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v4No1 / 62
360amnoncommon agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root2018-08-21v4No1 / 87
618amnoncommon early flowering stage, canada, farm, root, root endosphere, cannabis sativa2020-05-04v4No1 / 205
618amnoncommon pre-vegetative stage, canada, farm, root, root endosphere, cannabis sativa2020-05-04v4No1 / 318
618amnoncommon late flowering stage, canada, farm, root, root endosphere, cannabis sativa2020-05-04v4No1 / 352
618amnon high in root endosphere root compared to rhizosphere in canada farm cannabis sativa 2020-05-04v4No1 / 510
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
618amnon high in rhizosphere compared to root endosphere root in canada farm cannabis sativa 2020-05-04v4No1 / 3134

Problems / suggestions? Please email info AT dbbact DOT org