Summary for ontology term: rumen

Number of annotations with term: 49

Annotations:

common ontology terms
term enrichment score
TermScore
rumen0.940784
ovis aries0.442260
bos grunniens0.391960
yak0.335878
ireland0.328767
sheep0.276498
bos taurus0.266667
alpine meadow0.246154
ruminal fluid0.246154
lamb0.246154
holstein-friesian bull0.246154
ruminant reticulum0.206897
omasum0.206897
rumen liquid0.176991
tibetan plateau0.164948
diet0.141176
age 30 days0.140351
dairy0.140351
mongolian sheep0.140351
age 100 days0.140351
camel0.140351
camelus dromedarius0.140351
qinghai province0.131148
state of nebraska0.123077
egypt0.115942
LOWER IN ruminant reticulum0.113208
LOWER IN omasum0.113208
age < 1 year0.109589
cow0.098765
farm0.093023
obsolete_juvenile stage0.089888
italy0.082474
china0.081522
LOWER IN colon0.078431
colon0.078431
LOWER IN rumen0.076923
green stage diet0.075472
spring0.075472
LOWER IN grass growth diet0.075472
caecum0.075472
grass growth diet0.075472
LOWER IN green stage diet0.075472
LOWER IN spring0.075472
LOWER IN withered grass diet0.075472
withered grass diet0.075472
age0.074534
LOWER IN rectum0.071429
rectum0.067797
LOWER IN caecum0.065574
kingdom of norway0.061538
sweden0.057971
child0.053691
LOWER IN winter0.050633
winter0.049383
LOWER IN summer0.047059
summer0.045977
abomasum0.039216
linseed oil food product0.039216
LOWER IN linseed oil food product0.039216
restricted feed0.039216
LOWER IN normal feed0.039216
LOWER IN restricted diet0.039216
660 days0.039216
LOWER IN 605 days0.039216
605 days0.039216
LOWER IN 660 days0.039216
LOWER IN rumen solids0.039216
rumen solids0.039216
LOWER IN rumen liquid0.039216
LOWER IN older age0.039216
younger age0.039216
corn diet0.039216
40mdgs diet0.039216
LOWER IN 27cds diet0.039216
LOWER IN 55cs diet0.039216
27cds diet0.039216
55cs diet0.039216
LOWER IN corn diet0.039216
LOWER IN 40mdgs diet0.039216
LOWER IN fresh clover diet0.039216
clover hay diet0.039216
fresh clover diet0.039216
LOWER IN clover hay diet0.039216
LOWER IN younger age0.038462
older age0.038462
normal diet0.037037
LOWER IN age0.035714
LOWER IN control diet0.035088
control diet0.035088
LOWER IN ileum0.033898
ileum0.033898
adult0.016495
research facility0.016227
LOWER IN control0.010417
control0.010363
united states of america0.009040
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN colon1.000000
colon1.000000
rumen0.923077
bos grunniens0.750000
LOWER IN ruminant reticulum0.750000
LOWER IN omasum0.750000
ruminant reticulum0.666667
omasum0.666667
yak0.666667
LOWER IN rumen0.666667
rumen liquid0.666667
ovis aries0.555556
age 30 days0.500000
dairy0.500000
alpine meadow0.500000
ruminal fluid0.500000
green stage diet0.500000
spring0.500000
LOWER IN grass growth diet0.500000
caecum0.500000
mongolian sheep0.500000
grass growth diet0.500000
LOWER IN green stage diet0.500000
LOWER IN spring0.500000
LOWER IN withered grass diet0.500000
abomasum0.500000
lamb0.500000
ireland0.500000
age 100 days0.500000
linseed oil food product0.500000
LOWER IN linseed oil food product0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
LOWER IN older age0.500000
younger age0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
camel0.500000
camelus dromedarius0.500000
LOWER IN fresh clover diet0.500000
clover hay diet0.500000
fresh clover diet0.500000
LOWER IN clover hay diet0.500000
withered grass diet0.500000
sheep0.428571
qinghai province0.333333
LOWER IN younger age0.333333
older age0.333333
LOWER IN rectum0.285714
bos taurus0.250000
state of nebraska0.250000
rectum0.200000
normal diet0.200000
egypt0.200000
tibetan plateau0.166667
LOWER IN caecum0.166667
diet0.166667
age < 1 year0.166667
LOWER IN age0.142857
LOWER IN control diet0.125000
control diet0.125000
kingdom of norway0.125000
cow0.125000
obsolete_juvenile stage0.100000
LOWER IN ileum0.100000
ileum0.100000
sweden0.100000
age0.095238
italy0.083333
farm0.068966
LOWER IN winter0.066667
winter0.062500
LOWER IN summer0.055556
summer0.052632
china0.045045
child0.040000
adult0.009174
research facility0.009009
LOWER IN control0.006993
control0.006944
united states of america0.004785
Fraction of annotations for the query sequences containing the term
TermScore
rumen0.959184
china0.428571
ovis aries0.367347
bos taurus0.285714
bos grunniens0.265306
ireland0.244898
yak0.224490
sheep0.204082
tibetan plateau0.163265
alpine meadow0.163265
ruminal fluid0.163265
lamb0.163265
holstein-friesian bull0.163265
farm0.142857
ruminant reticulum0.122449
omasum0.122449
diet0.122449
rumen liquid0.102041
age 30 days0.081633
obsolete_juvenile stage0.081633
italy0.081633
dairy0.081633
mongolian sheep0.081633
child0.081633
age 100 days0.081633
research facility0.081633
qinghai province0.081633
age < 1 year0.081633
cow0.081633
united states of america0.081633
state of nebraska0.081633
egypt0.081633
camel0.081633
camelus dromedarius0.081633
adult0.081633
LOWER IN ruminant reticulum0.061224
LOWER IN omasum0.061224
age0.061224
LOWER IN caecum0.040816
LOWER IN colon0.040816
LOWER IN rectum0.040816
green stage diet0.040816
spring0.040816
LOWER IN summer0.040816
LOWER IN grass growth diet0.040816
caecum0.040816
colon0.040816
rectum0.040816
LOWER IN rumen0.040816
grass growth diet0.040816
summer0.040816
LOWER IN green stage diet0.040816
LOWER IN spring0.040816
LOWER IN withered grass diet0.040816
LOWER IN winter0.040816
sweden0.040816
kingdom of norway0.040816
winter0.040816
withered grass diet0.040816
LOWER IN ileum0.020408
ileum0.020408
abomasum0.020408
LOWER IN control diet0.020408
linseed oil food product0.020408
control diet0.020408
LOWER IN linseed oil food product0.020408
restricted feed0.020408
LOWER IN control0.020408
LOWER IN normal feed0.020408
control0.020408
LOWER IN restricted diet0.020408
normal diet0.020408
660 days0.020408
LOWER IN 605 days0.020408
605 days0.020408
LOWER IN 660 days0.020408
LOWER IN rumen solids0.020408
rumen solids0.020408
LOWER IN rumen liquid0.020408
LOWER IN younger age0.020408
older age0.020408
LOWER IN age0.020408
LOWER IN older age0.020408
younger age0.020408
corn diet0.020408
40mdgs diet0.020408
LOWER IN 27cds diet0.020408
LOWER IN 55cs diet0.020408
27cds diet0.020408
55cs diet0.020408
LOWER IN corn diet0.020408
LOWER IN 40mdgs diet0.020408
LOWER IN fresh clover diet0.020408
clover hay diet0.020408
fresh clover diet0.020408
LOWER IN clover hay diet0.020408
Exp. ID User ID Description Date Region Flag Sequences
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil food product in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 1
439amnonpresent only in abomasum in yak rumen ( high in abomasum compared to omasum ruminant reticulum in bos grunniens yak rumen farm china )2018-12-31v4No1 / 2
561amnondominant bos grunniens, yak, china, tibetan plateau, alpine meadow, rumen, ruminal fluid2019-11-05v3No1 / 3
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in diet linseed oil food product compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 4
329amnondominant ovis aries, sheep, kingdom of norway, rumen2018-05-13v4No1 / 4
551amnondominant egypt, camel, camelus dromedarius, rumen, adult2019-08-27v3No1 / 7
82amnonhigh freq. in dairy cow rumen fluid (dominant bos taurus, sweden, rumen)2017-03-05v4No1 / 12
657amnondominant research facility, china, qinghai province, rumen liquid, rumen, age < 1 year, lamb, sheep, ovis aries2020-09-13v4No1 / 12
27amnondominant bos grunniens, rumen, china2016-12-05v4No1 / 12
657amnonnegatively correlated with age ( high in younger age compared to age older age in research facility china qinghai province rumen liquid rumen age < 1 year lamb sheep ovis aries )2020-09-13v4No1 / 14
491amnondominant ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 16
83amnondominant bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
363amnondominant ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-29v4No1 / 18
111amnondominant rumen, ruminant reticulum, omasum, mongolian sheep, ovis aries, china2017-04-09v4No1 / 18
561amnon high in winter withered grass diet compared to spring green stage diet in ruminal fluid rumen alpine meadow tibetan plateau china yak bos grunniens 2019-11-05v3No1 / 18
261amnondominant bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
439amnondominant bos grunniens, yak, rumen, farm, china2018-12-31v4No1 / 20
561amnon high in green stage diet spring compared to withered grass diet winter in bos grunniens yak china tibetan plateau alpine meadow rumen ruminal fluid 2019-11-05v3No1 / 35
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
439amnoncommon bos grunniens, yak, rumen, farm, china2018-12-31v4No1 / 52
657amnonpostively correlated with age ( high in older age age compared to younger age in research facility china qinghai province rumen liquid rumen age < 1 year lamb sheep ovis aries )2020-09-13v4No1 / 65
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 101
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 105
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
551amnon high in fresh clover diet compared to clover hay diet in egypt camel camelus dromedarius rumen adult 2019-08-27v3No1 / 136
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
111amnoncommon rumen, ruminant reticulum, omasum, mongolian sheep, ovis aries, china2017-04-09v4No1 / 253
561amnon high in grass growth diet summer compared to green stage diet spring in bos grunniens yak china tibetan plateau alpine meadow rumen ruminal fluid 2019-11-05v3No1 / 256
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
551amnon high in diet clover hay diet compared to fresh clover diet in egypt camel camelus dromedarius rumen adult 2019-08-27v3No1 / 291
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep ovis aries china 2017-04-09v4No1 / 294
561amnon high in grass growth diet summer compared to withered grass diet winter in ruminal fluid rumen alpine meadow tibetan plateau china yak bos grunniens 2019-11-05v3No1 / 294
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-29v4No1 / 302
561amnon high in winter withered grass diet compared to grass growth diet summer in ruminal fluid rumen alpine meadow tibetan plateau china yak bos grunniens 2019-11-05v3No1 / 357
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 360
551amnoncommon egypt, camel, camelus dromedarius, rumen, adult2019-08-27v3No1 / 370
561amnon high in green stage diet spring compared to summer grass growth diet in bos grunniens yak china tibetan plateau alpine meadow rumen ruminal fluid 2019-11-05v3No1 / 397
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep ovis aries china 2017-04-09v4No1 / 464
329amnoncommon ovis aries, sheep, kingdom of norway, rumen2018-05-13v4No1 / 506
657amnoncommon research facility, china, qinghai province, rumen liquid, rumen, age < 1 year, lamb, sheep, ovis aries2020-09-13v4No1 / 517
27amnoncommon bos grunniens, rumen, china2016-12-05v4No1 / 532
561amnoncommon bos grunniens, yak, china, tibetan plateau, alpine meadow, rumen, ruminal fluid2019-11-05v3No1 / 670
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1322
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

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