Summary for ontology term: rumen

Number of annotations with term: 37

Annotations:

common ontology terms
term enrichment score
TermScore
rumen0.927152
ovis aries0.482759
ireland0.393443
bos taurus0.334661
holstein-friesian bull0.301887
ruminant reticulum0.260870
omasum0.260870
sheep0.244898
bos grunniens0.224719
age 30 days0.177778
dairy0.177778
mongolian sheep0.177778
lamb0.177778
age 100 days0.177778
camelus dromedarius0.177778
camel0.177778
diet0.164384
state of nebraska0.163265
LOWER IN ruminant reticulum0.146341
LOWER IN omasum0.146341
egypt0.140351
yak0.139535
cow0.131148
farm0.122807
italy0.109589
obsolete_juvenile stage0.103896
LOWER IN rumen0.100000
LOWER IN rectum0.093023
LOWER IN caecum0.086957
rectum0.086957
LOWER IN colon0.080000
sweden0.075472
kingdom of norway0.075472
child0.073394
colon0.072727
caecum0.068966
china0.061644
age0.053333
abomasum0.051282
linseed oil0.051282
LOWER IN linseed oil0.051282
restricted feed0.051282
LOWER IN normal feed0.051282
LOWER IN restricted diet0.051282
660 days0.051282
LOWER IN 605 days0.051282
605 days0.051282
LOWER IN 660 days0.051282
rumen liquid0.051282
LOWER IN rumen solids0.051282
rumen solids0.051282
LOWER IN rumen liquid0.051282
corn diet0.051282
40mdgs diet0.051282
LOWER IN 27cds diet0.051282
LOWER IN 55cs diet0.051282
27cds diet0.051282
55cs diet0.051282
LOWER IN corn diet0.051282
LOWER IN 40mdgs diet0.051282
clover hay diet0.051282
LOWER IN fresh clover diet0.051282
LOWER IN clover hay diet0.051282
fresh clover diet0.051282
normal diet0.047619
LOWER IN control diet0.045455
control diet0.045455
LOWER IN ileum0.044444
ileum0.044444
adult0.023188
LOWER IN control0.012821
control0.012739
united states of america0.010458
Fraction of dbbact annotations with this term covered by the query
TermScore
rumen0.909091
LOWER IN ruminant reticulum0.750000
LOWER IN omasum0.750000
ovis aries0.666667
ruminant reticulum0.666667
omasum0.666667
LOWER IN rumen0.666667
bos grunniens0.666667
age 30 days0.500000
dairy0.500000
mongolian sheep0.500000
yak0.500000
abomasum0.500000
sheep0.500000
lamb0.500000
ireland0.500000
age 100 days0.500000
linseed oil0.500000
LOWER IN linseed oil0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
camelus dromedarius0.500000
camel0.500000
clover hay diet0.500000
LOWER IN fresh clover diet0.500000
LOWER IN clover hay diet0.500000
fresh clover diet0.500000
LOWER IN rectum0.333333
state of nebraska0.333333
bos taurus0.300000
LOWER IN caecum0.222222
rectum0.222222
normal diet0.200000
egypt0.200000
diet0.166667
cow0.166667
LOWER IN colon0.153846
LOWER IN control diet0.142857
control diet0.142857
LOWER IN ileum0.125000
ileum0.125000
sweden0.125000
kingdom of norway0.125000
italy0.111111
colon0.111111
obsolete_juvenile stage0.100000
caecum0.095238
farm0.090909
child0.055556
age0.052632
china0.035294
adult0.012987
LOWER IN control0.008403
control0.008333
united states of america0.005495
Fraction of annotations for the query sequences containing the term
TermScore
rumen0.945946
ovis aries0.378378
bos taurus0.378378
ireland0.324324
china0.243243
holstein-friesian bull0.216216
farm0.189189
ruminant reticulum0.162162
omasum0.162162
sheep0.162162
diet0.162162
bos grunniens0.135135
age 30 days0.108108
obsolete_juvenile stage0.108108
italy0.108108
dairy0.108108
mongolian sheep0.108108
lamb0.108108
child0.108108
age 100 days0.108108
cow0.108108
united states of america0.108108
state of nebraska0.108108
adult0.108108
camelus dromedarius0.108108
camel0.108108
egypt0.108108
LOWER IN ruminant reticulum0.081081
LOWER IN omasum0.081081
yak0.081081
LOWER IN caecum0.054054
LOWER IN colon0.054054
LOWER IN rectum0.054054
caecum0.054054
colon0.054054
rectum0.054054
LOWER IN rumen0.054054
sweden0.054054
age0.054054
kingdom of norway0.054054
LOWER IN ileum0.027027
ileum0.027027
abomasum0.027027
linseed oil0.027027
LOWER IN control diet0.027027
control diet0.027027
LOWER IN linseed oil0.027027
restricted feed0.027027
LOWER IN control0.027027
LOWER IN normal feed0.027027
control0.027027
LOWER IN restricted diet0.027027
normal diet0.027027
660 days0.027027
LOWER IN 605 days0.027027
605 days0.027027
LOWER IN 660 days0.027027
rumen liquid0.027027
LOWER IN rumen solids0.027027
rumen solids0.027027
LOWER IN rumen liquid0.027027
corn diet0.027027
40mdgs diet0.027027
LOWER IN 27cds diet0.027027
LOWER IN 55cs diet0.027027
27cds diet0.027027
55cs diet0.027027
LOWER IN corn diet0.027027
LOWER IN 40mdgs diet0.027027
clover hay diet0.027027
LOWER IN fresh clover diet0.027027
LOWER IN clover hay diet0.027027
fresh clover diet0.027027
Exp. ID User ID Description Date Region Flag Sequences
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 1
439amnonpresent only in abomasum in yak rumen ( high in abomasum compared to omasum ruminant reticulum in bos grunniens yak rumen china farm )2018-12-31v4No1 / 2
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in linseed oil diet compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 4
329amnonhighfreq ovis aries, sheep, kingdom of norway, rumen2018-05-13v4No1 / 4
551amnonhighfreq adult, rumen, camelus dromedarius, camel, egypt2019-08-27v3No1 / 7
82amnonhigh freq. in dairy cow rumen fluid (highfreq bos taurus, sweden, rumen)2017-03-05v4No1 / 12
27amnonhighfreq bos grunniens, rumen, china2016-12-05v4No1 / 12
491amnonhighfreq ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 16
83amnonhighfreq bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-29v4No1 / 18
111amnonhighfreq rumen, ruminant reticulum, omasum, mongolian sheep, china, ovis aries2017-04-09v4No1 / 18
261amnonhighfreq bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
439amnonhighfreq bos grunniens, yak, rumen, china, farm2018-12-31v4No1 / 20
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
439amnoncommon bos grunniens, yak, rumen, china, farm2018-12-31v4No1 / 52
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 101
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 105
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
551amnon high in fresh clover diet compared to clover hay diet in adult rumen camelus dromedarius camel egypt 2019-08-27v3No1 / 136
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
111amnoncommon rumen, ruminant reticulum, omasum, mongolian sheep, china, ovis aries2017-04-09v4No1 / 253
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
551amnon high in clover hay diet diet compared to fresh clover diet in adult rumen camelus dromedarius camel egypt 2019-08-27v3No1 / 291
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep china ovis aries 2017-04-09v4No1 / 294
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-29v4No1 / 302
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 360
551amnoncommon adult, rumen, camelus dromedarius, camel, egypt2019-08-27v3No1 / 370
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep china ovis aries 2017-04-09v4No1 / 464
329amnoncommon ovis aries, sheep, kingdom of norway, rumen2018-05-13v4No1 / 506
27amnoncommon bos grunniens, rumen, china2016-12-05v4No1 / 532
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1322
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

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