Summary for ontology term: rumen

Number of annotations with term: 33

Annotations:

common ontology terms
term enrichment score
TermScore
rumen0.968750
ovis aries0.554455
ireland0.533333
bos taurus0.398104
holstein-friesian bull0.326531
ruminant reticulum0.285714
omasum0.285714
sheep0.285714
bos grunniens0.246914
age 30 days0.195122
dairy0.195122
mongolian sheep0.195122
state of nebraska0.177778
farm0.170732
cow0.163265
LOWER IN ruminant reticulum0.162162
LOWER IN omasum0.162162
yak0.153846
diet0.150754
italy0.131148
LOWER IN rumen0.111111
obsolete_juvenile stage0.109589
LOWER IN rectum0.102564
child0.098765
LOWER IN caecum0.095238
rectum0.095238
LOWER IN colon0.088889
sweden0.088889
kingdom of norway0.085106
colon0.081633
caecum0.075472
china0.071429
abomasum0.057143
restricted feed0.057143
LOWER IN normal feed0.057143
LOWER IN restricted diet0.057143
660 days0.057143
LOWER IN 605 days0.057143
605 days0.057143
LOWER IN 660 days0.057143
rumen liquid0.057143
LOWER IN rumen solids0.057143
rumen solids0.057143
LOWER IN rumen liquid0.057143
corn diet0.057143
40mdgs diet0.057143
LOWER IN 27cds diet0.057143
LOWER IN 55cs diet0.057143
27cds diet0.057143
55cs diet0.057143
LOWER IN corn diet0.057143
LOWER IN 40mdgs diet0.057143
age0.056338
LOWER IN control diet0.052632
control diet0.052632
normal diet0.052632
LOWER IN ileum0.050000
ileum0.050000
LOWER IN control0.014706
control0.014493
united states of america0.011817
Fraction of dbbact annotations with this term covered by the query
TermScore
rumen1.000000
ireland1.000000
ovis aries0.800000
LOWER IN ruminant reticulum0.750000
LOWER IN omasum0.750000
ruminant reticulum0.666667
omasum0.666667
LOWER IN rumen0.666667
bos grunniens0.666667
sheep0.666667
age 30 days0.500000
dairy0.500000
mongolian sheep0.500000
yak0.500000
abomasum0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
bos taurus0.375000
LOWER IN rectum0.333333
state of nebraska0.333333
cow0.250000
LOWER IN caecum0.222222
rectum0.222222
LOWER IN control diet0.200000
control diet0.200000
normal diet0.200000
LOWER IN colon0.166667
sweden0.166667
diet0.150000
italy0.142857
LOWER IN ileum0.142857
ileum0.142857
farm0.142857
kingdom of norway0.142857
colon0.125000
obsolete_juvenile stage0.100000
caecum0.100000
child0.083333
age0.052632
china0.041096
LOWER IN control0.009709
control0.009524
united states of america0.006211
Fraction of annotations for the query sequences containing the term
TermScore
rumen0.939394
ovis aries0.424242
bos taurus0.424242
ireland0.363636
china0.272727
holstein-friesian bull0.242424
farm0.212121
ruminant reticulum0.181818
omasum0.181818
sheep0.181818
bos grunniens0.151515
diet0.151515
age 30 days0.121212
obsolete_juvenile stage0.121212
italy0.121212
dairy0.121212
mongolian sheep0.121212
lamb0.121212
child0.121212
age 100 days0.121212
cow0.121212
united states of america0.121212
state of nebraska0.121212
LOWER IN ruminant reticulum0.090909
LOWER IN omasum0.090909
yak0.090909
LOWER IN caecum0.060606
LOWER IN colon0.060606
LOWER IN rectum0.060606
caecum0.060606
colon0.060606
rectum0.060606
LOWER IN rumen0.060606
sweden0.060606
age0.060606
kingdom of norway0.060606
LOWER IN ileum0.030303
ileum0.030303
abomasum0.030303
linseed oil0.030303
LOWER IN control diet0.030303
control diet0.030303
LOWER IN linseed oil0.030303
restricted feed0.030303
LOWER IN control0.030303
LOWER IN normal feed0.030303
control0.030303
LOWER IN restricted diet0.030303
normal diet0.030303
660 days0.030303
LOWER IN 605 days0.030303
605 days0.030303
LOWER IN 660 days0.030303
rumen liquid0.030303
LOWER IN rumen solids0.030303
rumen solids0.030303
LOWER IN rumen liquid0.030303
corn diet0.030303
40mdgs diet0.030303
LOWER IN 27cds diet0.030303
LOWER IN 55cs diet0.030303
27cds diet0.030303
55cs diet0.030303
LOWER IN corn diet0.030303
LOWER IN 40mdgs diet0.030303
Exp. ID User ID Description Date Sequences
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-261 / 1
439amnonpresent only in abomasum in yak rumen ( high in abomasum compared to omasum ruminant reticulum in bos grunniens yak rumen china farm )2018-12-311 / 2
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in linseed oil diet compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-261 / 4
329amnonhighfreq ovis aries, sheep, kingdom of norway, rumen2018-05-131 / 4
82amnonhigh freq. in dairy cow rumen fluid (highfreq bos taurus, sweden, rumen)2017-03-051 / 12
27amnonhighfreq bos grunniens, rumen, china2016-12-051 / 12
491amnonhighfreq ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-261 / 16
83amnonhighfreq bos taurus, rumen, holstein-friesian bull, ireland2017-03-051 / 16
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-291 / 18
111amnonhighfreq rumen, ruminant reticulum, omasum, mongolian sheep, china, ovis aries2017-04-091 / 18
261amnonhighfreq bos taurus, cow, rumen, united states of america, state of nebraska2017-12-101 / 19
439amnonhighfreq bos grunniens, yak, rumen, china, farm2018-12-311 / 20
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-051 / 40
439amnoncommon bos grunniens, yak, rumen, china, farm2018-12-311 / 52
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-051 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-051 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-101 / 83
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-291 / 101
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-261 / 105
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-101 / 113
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-051 / 248
111amnoncommon rumen, ruminant reticulum, omasum, mongolian sheep, china, ovis aries2017-04-091 / 253
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-101 / 266
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep china ovis aries 2017-04-091 / 294
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, rumen, ruminant reticulum, omasum2018-08-291 / 302
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-291 / 360
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep china ovis aries 2017-04-091 / 464
329amnoncommon ovis aries, sheep, kingdom of norway, rumen2018-05-131 / 506
27amnoncommon bos grunniens, rumen, china2016-12-051 / 532
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-051 / 757
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-051 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-051 / 1322
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-051 / 1735

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