Summary for ontology term: rural community

Number of annotations with term: 42

Annotations:

common ontology terms
term enrichment score
TermScore
rural community0.880309
chuquisaca department0.363636
himalayas0.343750
age 5-13 years0.307692
nepal0.293333
bolivia0.266667
small village0.222222
kebbi state0.222222
age 10-15 years0.222222
nigeria0.200000
LOWER IN rural community0.170213
child0.169014
forearm0.160000
mouth mucosa0.148148
arm0.148148
tunapuco0.125000
thailand0.125000
tharu0.125000
agrarian0.125000
chepang0.125000
urinary schistosomiasis0.125000
schistosomiasis0.125000
LOWER IN united states of america0.120000
peru0.117647
forager0.117647
LOWER IN small village0.086957
LOWER IN mouth mucosa0.086957
LOWER IN arm0.086957
LOWER IN forearm0.086957
raji0.086957
raute0.086957
LOWER IN city0.083333
homo sapiens0.074534
LOWER IN skin0.074074
LOWER IN mouth0.071429
adult0.070692
city0.067797
mouth0.065574
feces0.058136
skin0.057971
LOWER IN feces0.055556
LOWER IN peru0.045455
LOWER IN tunapuco0.045455
LOWER IN state of oklahoma0.045455
LOWER IN thailand0.045455
hmong0.045455
LOWER IN karen0.045455
LOWER IN myanmar0.045455
karen0.045455
myanmar0.045455
LOWER IN hmong0.045455
LOWER IN nepal0.045455
LOWER IN himalayas0.045455
LOWER IN chepang0.045455
LOWER IN forager0.045455
LOWER IN tharu0.045455
LOWER IN agrarian0.045455
LOWER IN urinary schistosomiasis0.045455
LOWER IN schistosomiasis0.045455
state of oklahoma0.044444
LOWER IN china0.043478
china0.038911
united states of america0.026432
control0.014925
LOWER IN control0.012422
Fraction of dbbact annotations with this term covered by the query
TermScore
rural community0.857143
LOWER IN rural community0.800000
LOWER IN peru0.500000
LOWER IN small village0.500000
LOWER IN tunapuco0.500000
small village0.500000
tunapuco0.500000
LOWER IN state of oklahoma0.500000
thailand0.500000
LOWER IN thailand0.500000
hmong0.500000
LOWER IN karen0.500000
LOWER IN myanmar0.500000
karen0.500000
myanmar0.500000
LOWER IN hmong0.500000
chuquisaca department0.500000
forearm0.500000
LOWER IN mouth mucosa0.500000
LOWER IN arm0.500000
LOWER IN forearm0.500000
LOWER IN nepal0.500000
LOWER IN himalayas0.500000
himalayas0.500000
tharu0.500000
agrarian0.500000
LOWER IN chepang0.500000
LOWER IN forager0.500000
chepang0.500000
LOWER IN tharu0.500000
LOWER IN agrarian0.500000
raji0.500000
raute0.500000
kebbi state0.500000
age 10-15 years0.500000
urinary schistosomiasis0.500000
schistosomiasis0.500000
LOWER IN urinary schistosomiasis0.500000
LOWER IN schistosomiasis0.500000
LOWER IN united states of america0.375000
state of oklahoma0.333333
peru0.333333
LOWER IN city0.333333
age 5-13 years0.333333
mouth mucosa0.333333
arm0.333333
nepal0.333333
forager0.333333
nigeria0.333333
LOWER IN china0.250000
bolivia0.250000
LOWER IN skin0.166667
LOWER IN mouth0.142857
city0.117647
child0.105263
LOWER IN feces0.066667
mouth0.050000
skin0.041667
adult0.038961
homo sapiens0.038710
feces0.030151
china0.023256
united states of america0.016216
LOWER IN control0.008403
control0.008333
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
rural community0.904762
feces0.809524
child0.428571
adult0.380952
age 5-13 years0.285714
bolivia0.285714
chuquisaca department0.285714
nepal0.261905
himalayas0.261905
small village0.142857
nigeria0.142857
kebbi state0.142857
age 10-15 years0.142857
china0.119048
LOWER IN rural community0.095238
mouth mucosa0.095238
mouth0.095238
skin0.095238
arm0.095238
forearm0.095238
united states of america0.071429
peru0.071429
tunapuco0.071429
LOWER IN united states of america0.071429
thailand0.071429
tharu0.071429
agrarian0.071429
chepang0.071429
forager0.071429
urinary schistosomiasis0.071429
schistosomiasis0.071429
control0.071429
city0.047619
LOWER IN small village0.047619
LOWER IN city0.047619
LOWER IN feces0.047619
LOWER IN mouth mucosa0.047619
LOWER IN mouth0.047619
LOWER IN skin0.047619
LOWER IN arm0.047619
LOWER IN forearm0.047619
raji0.047619
raute0.047619
state of oklahoma0.023810
LOWER IN peru0.023810
LOWER IN tunapuco0.023810
LOWER IN state of oklahoma0.023810
LOWER IN thailand0.023810
hmong0.023810
LOWER IN karen0.023810
LOWER IN myanmar0.023810
karen0.023810
myanmar0.023810
LOWER IN hmong0.023810
LOWER IN china0.023810
LOWER IN nepal0.023810
LOWER IN himalayas0.023810
LOWER IN chepang0.023810
LOWER IN forager0.023810
LOWER IN tharu0.023810
LOWER IN agrarian0.023810
LOWER IN control0.023810
LOWER IN urinary schistosomiasis0.023810
LOWER IN schistosomiasis0.023810
Exp. ID User ID Description Date Region Flag Sequences
517amnonhighfreq homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, mouth mucosa, mouth2019-05-29v4No1 / 8
517amnonhighfreq homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, skin, arm, forearm2019-05-29v4No1 / 13
477amnonhighfreq homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v4No1 / 14
290amnon high in city compared to rural community small village in homo sapiens feces adult china 2018-02-01v4No1 / 14
517amnonhighfreq feces, homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department2019-05-29v4No1 / 15
290amnonhighfreq homo sapiens, feces, adult, small village, rural community, china2018-02-01v4No1 / 17
477amnonhighfreq homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v4No1 / 18
276amnonhighfreq feces, homo sapiens, peru, small village, tunapuco, rural community, adult2018-01-22v4No1 / 19
477amnonhigher in agrarian tharu population compared to foraging chepang population ( high in tharu agrarian compared to chepang forager in homo sapiens feces adult himalayas nepal rural community )2019-01-28v4No1 / 19
477amnonhighfreq homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v4No1 / 19
477amnonhighfreq homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v4No1 / 20
290amnon high in rural community small village compared to city in homo sapiens feces adult china 2018-02-01v4No1 / 21
509amnonhighfreq feces, homo sapiens, nigeria, kebbi state, rural community, child, age 10-15 years, control2019-03-18v4No1 / 22
509amnonhighfreq feces, homo sapiens, nigeria, kebbi state, rural community, child, age 10-15 years, urinary schistosomiasis, schistosomiasis2019-03-18v4No1 / 23
509amnon high in urinary schistosomiasis schistosomiasis compared to control in feces homo sapiens nigeria kebbi state rural community child age 10-15 years 2019-03-18v4No1 / 34
509amnon high in control compared to urinary schistosomiasis schistosomiasis in feces homo sapiens nigeria kebbi state rural community child age 10-15 years 2019-03-18v4No1 / 35
517amnoncommon homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, mouth mucosa, mouth2019-05-29v4No1 / 44
477amnonlower in agrarian tharu population compared to foraging chepang population ( high in chepang forager compared to tharu agrarian in homo sapiens feces adult himalayas nepal rural community )2019-01-28v4No1 / 73
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v4No1 / 74
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v4No1 / 76
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v4No1 / 88
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v4No1 / 97
477amnon high in nepal rural community himalayas compared to united states of america in homo sapiens feces adult 2019-01-28v4No1 / 111
517amnoncommon feces, homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department2019-05-29v4No1 / 113
517amnoncommon homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, skin, arm, forearm2019-05-29v4No1 / 121
400amnonhigher in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in hmong china compared to karen myanmar in homo sapiens feces thailand rural community )2018-11-18v4No1 / 135
509amnoncommon feces, homo sapiens, nigeria, kebbi state, rural community, child, age 10-15 years, urinary schistosomiasis, schistosomiasis2019-03-18v4No1 / 146
509amnoncommon feces, homo sapiens, nigeria, kebbi state, rural community, child, age 10-15 years, control2019-03-18v4No1 / 147
517amnon high in mouth mucosa mouth compared to skin arm forearm in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 162
276amnon high in united states of america city state of oklahoma compared to peru small village tunapuco rural community in feces homo sapiens adult 2018-01-22v4No1 / 168
290amnoncommon homo sapiens, feces, adult, small village, rural community, china2018-02-01v4No1 / 218
517amnon high in mouth mucosa mouth compared to feces in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 242
276amnoncommon feces, homo sapiens, peru, small village, tunapuco, rural community, adult2018-01-22v4No1 / 263
477amnon high in united states of america compared to nepal himalayas rural community in homo sapiens feces adult 2019-01-28v4No1 / 295
400amnonlower in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in karen myanmar compared to hmong china in homo sapiens feces thailand rural community )2018-11-18v4No1 / 329
400amnonlower in people from thailand compared to 2nd generation immigrants to usa ( high in united states of america compared to thailand rural community in homo sapiens feces )2018-11-18v4No1 / 343
400amnonhigher in people from thailand compared to 2nd generation immigrants to usa ( high in thailand rural community compared to united states of america in homo sapiens feces )2018-11-18v4No1 / 378
276amnon high in peru small village tunapuco rural community compared to united states of america city state of oklahoma in feces homo sapiens adult 2018-01-22v4No1 / 469
517amnon high in feces compared to skin arm forearm in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 606
517amnon high in feces compared to mouth mucosa mouth in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 752
517amnon high in skin arm forearm compared to feces in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 836
517amnon high in skin arm forearm compared to mouth mucosa mouth in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 1014

Problems / suggestions? Please email info AT dbbact DOT org