×
Summary for ontology term: snow
Number of annotations with term: 16
Positive-associated sequences
Negative-associated sequences
common sequences
Top positive-associated sequence
Taxonomy
Sequence
Recall
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhodospirillales
TACGAAGGGGGCGAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGCGAACCAAGTCAGATGTGAAAGTCCTGGGCTTAACCTGGGGACTGCATTTGATACTGGTTTGCTTGAATTCGGGAGAGGATAGCGGAATTCCCAG
0.062500
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGTTAAGACAGATGTGAAATCCCCGGGCTTAACCTGGGAACTGCATTTGTGACTGGCAAGCTAGAGTATGGCAGAGGGGGGTAGAATTCCACG
0.062500
d__Bacteria;p__"Bacteroidetes";c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Cytophaga
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTGATAAGTCAGTGGTGAAAGCCGATCGCTTAACGATCGAACTGCCATTGATACTGCCAGGCTTGAGTATAGTTGAGGTAGGCGGAATTGACAG
0.062500
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium
TACGAAGGGGGCTAGCGTTGTTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGATCGATCAGTCAGGGGTGAAATCCCAGAGCTCAACTCTGGAACTGCCTTTGATACTGTCGATCTGGAGTATGGAAGAGGTGAGTGGAATTCCGAG
0.062500
d__Bacteria;p__"Proteobacteria";c__Deltaproteobacteria;o__Myxococcales
GACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGTGTGTAGGCGGCCATGCAAGTCGGATGTGAAAGCCCTGGGCTCAACCCAGGAAGTGCACTCGAAACTGCGTGGCTTGAGTACTGGAGAGGTTGGTGGAATTCTCGG
0.062500
d__Bacteria
TACGTAGGGGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGTGTAGGCGGCTCGGTAAGTCCGCTCTGAAAGCCCGAGGCTCAACCTCGGGAGGCGGGTGGATACTGTCGAGCTCGAGTCCGGAAGAGGAGTGTGGAATTCCTGG
0.062500
d__Bacteria
TACGTAGGGGGCGAGCGTTGTCCGAAGTTACTGGGCGTAAAGAGCGCGTAGGCGGACCCTTAAGTGAGGGGTGAAAGGTTCGGGCTCAACCCGGAGAGTGCCTTTCATACTGGGGGTCTTGAGTGCGGGAGAGGCAAGTGGAATGGTCGG
0.062500
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Janthinobacterium
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGTCTGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTGGAGACTGCAAGGCTAGAATCTGGCAGAGGGGGGTAGAATTCCACG
0.062500
d__Bacteria;p__"Planctomycetes";c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae
TACGAACTGTGCAAACGTTATTCGGAATCACTGGGCTTACAGGGTGCGTAGGCGGCTTGTTAAGTAGGGTGTGAAAGCCCCCGGCTCAACCGGGGAATGGCGCCCTAAACTGGCGAGCTAGAGTGAGATAGGGGTGTGTGGAACTTCCGG
0.062500
d__Bacteria;p__"Bacteroidetes";c__Cytophagia;o__Cytophagales
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGTCAATTAAGTCAGTGGTGAAATACGGCAGCTCAACTGTCGAGGTGCCATTGATACTGGTTGACTTGAGTACTGATGAGGTAGGCGGAATGGACGG
0.062500
Top negative-associated sequence
Taxonomy
Sequence
Recall
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae 1;g__Desulfosporosinus
TACGTAGGGGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGTAGGCGGATAGTTAAGTCCGGTGTGAAAGATCAGGGCTCAACCCTGAGAGTGCATCGGAAACTGGTTATCTTGAGGACAGGAGAGGAAAGTGGAATTCCACG
0.500000
d__Bacteria
GACAGAGGGGGCAAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTAGGCGGGATGGCAAGTCGGTCGTGAAATCCCTCGGCTCAACCGAGGAGCGTCGGCCGATACTGCCGTTCTTGAGGGATGCAGAGGAGACTGGAATTCCCGG
0.500000
d__Bacteria
TACGGGGGGTGCGAGCGTTGTCCGGAATCACTGGGCGTAAAGGGCGCGTAGGTGGTTTGATAAGGGTGTGGTGAAAGTCCGGGGCTCAACCCCGGATCTGCCGTGCCGACTGTCAAACTCGAGGGCTGTAGAGGCAGGCGGAATTCCGGG
0.500000
d__Bacteria;p__"Proteobacteria";c__Deltaproteobacteria
GACAGAGGGTGCGAACGTTGCTCGGAATTACTGGGCGTAAAGCGTGTGTAGGCGGCCACGCAAGTCGGATGTGAAAGCCCTGGGCTCAACCCAGGAAGTGCACCCGATACTGCGACGGCTTGAGTACCGGAGAGGTTGGTGGAATTCTCG
0.500000
d__Bacteria;p__"Acidobacteria";c__Acidobacteria_Gp2;g__Gp2
GACGTAGGGGGCCAGCGTTGTTCGGAATTACTGGGTGTAAAGGGTTCGTAGGCGGTGCGGCAAGTTGGGAGTGAAATCTCTGGGCTTAACCCAGAGGCTGCTTCCAAAACTGCTGTGCTTGAGTGTGGGAGAGGCGCGTGGAATTGCAGG
0.500000
d__Bacteria;p__"Acidobacteria";c__Acidobacteria_Gp3;g__Gp3
TACGTAGGCAGCAAGCGTTGTTCGGAGTTACTGGGCGTAAAGAGTGTGTAGGCGGTTCTCTAAGTTCCGTGTGAAATCTCCCGGCTCAACTGGGAGGGTGCGCGGAAAACTGGAGGGCTTGAGTATGGGAGAGGAAAGCGGAATTCCTGG
0.500000
d__Bacteria
TACGTAGGTGGCAAGCGTTACTCGGAATCACTAGGCGTAAAGCGCAGGTAGGAGGTTTAGTAAGTCTGTTGTGAAAGCTCCCGGCTTAACTGGGAGAGGTCAACGGAAACTGCTAGGCTAGAGTGCGGTAGAGGAAGATGGAATTCCCGG
0.500000
d__Bacteria;p__"Proteobacteria"
GACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGTGTGTAGGCTGCTACGCAAGTCGGATGTGAAATCCCCGGGCTCAACCCGGGAAGTGCACCCGAAACTGCGTGGCTTGAGTACCGGAGAGGTTGGTGGAATTCTCGG
0.500000
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAGTTGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTGGCGAGCTAGAGTATGGTAGAGGGTGGTGGAATTTCCTG
0.500000
d__Bacteria
GACAGAGGTGGCAAGCGTTGTTCGGATTTACTGGGCGTAAAGGGTGCGTAGGTGGTTAGGTAAGACCTGCGGGAAATCCCTGGGCTTAACCCAGGAAGGTCGCAGGTGACTGCCTAGCTAGAGGGCGGGAGAGGAGCGCGGAATTCCCGG
0.500000
Top COMMON/DOMINANT/HIGH sequence
Taxonomy
Sequence
F-Score
d__Bacteria;p__"Bacteroidetes"
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTCATTAAGTCAGTGGTGAAAGGTACCCGCTTAACGGGGACACTGCCATTGATACTGATGAGCTGGAGTACAGATGAAGTGGGCGGAATGTGTCA
0.733333
d__Bacteria;p__"Bacteroidetes";c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Hymenobacter
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTTTTAAGTCTGGGGTGAAAGCCCGTTGCTCAACAACGGAACTGCCCTGGAAACTGGAGAGCTTGAGTACAGACGAGGGTGGCGGAATGGACGG
0.714286
d__Bacteria;p__"Bacteroidetes";c__Sphingobacteriia;o__"Sphingobacteriales";f__Chitinophagaceae
TACGGAGGGTGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGTGCGTAGGTGGGCAGGTAAGTCAGTGGTGAAATCTTCAAGCTTAACTTGGAAACTGCCATTGATACTATTTGTCTTGAATATCCCGGAGGTAAGCGGAATATGTCA
0.645161
d__Bacteria;p__"Bacteroidetes"
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTCTATAAGTCAGTGGTGAAAGGTACCCGCTTAACGGGGACACTGCCATTGATACTGTGGAGCTGGAGTACAGATGAAGTGGGCGGAATGTGTCA
0.642857
d__Bacteria;p__"Bacteroidetes";c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Hymenobacter
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTTTTAAGTCCGGGGTGAAAGCCCGTTGCTCAACAACGGAACTGCCCCGGAAACTGGAGAGCTTGAGTACAGACGAGGGCGGCGGAATGGACGG
0.571429
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTTTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATGGCATTTGTGACTGGAAGGCTAGAGTGTGTCAGAGGGGGGTAGAATTCCACG
0.560000
d__Bacteria;p__"Bacteroidetes";c__Sphingobacteriia;o__"Sphingobacteriales";f__Chitinophagaceae
TACGGAGGGTGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGTGCGTAGGTGGGCAGGAAAGTCAGTGGTGAAATCTTCAAGCTTAACTTGGAAACTGCCATTGATACTATTTGTCTTGAATATCCCGGAGGTAAGCGGAATATGTCA
0.538462
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae
TACGAAGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTAGGCGGCTTACTAAGTTAGGTGTGAAATTCCTGGGCTTAACCTGGGGACTGCCCTTAATACAGGTAGGCTAGAGTGAGGAAGAGGGTTGTGGAATTCCCAG
0.538462
d__Bacteria;p__"Bacteroidetes";c__Sphingobacteriia;o__"Sphingobacteriales";f__Chitinophagaceae
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGAGCGTAGGCGGGCATGTAAGTCAGTGGTGAAATCTTGGGGCTCAACCCCGAAACTGCCATTGATACTATGTGCCTTGGATCCTGTTGAGGTTTGCGGAATATGTCA
0.538462
d__Bacteria;p__"Bacteroidetes";c__Sphingobacteriia;o__"Sphingobacteriales";f__Chitinophagaceae
TACGGAGGGTGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGTGCGTAGGTGGGTAGGAAAGTCAGTGGTGAAATCTTCAAGCTTAACTTGGAAACTGCCATTGATACTTTTTATCTTGAATATCCCGGAGGTAAGCGGAATATGTCA
0.518519
Annotations:
Annotations
F-Scores
Recall
Precision
Term reliability
term enrichment score
Term
Score
snow
0.863309
depth (snow) 0-5cm
0.428571
depth 0-5cm
0.352941
glacier peak wilderness
0.272727
arapaho national forest
0.272727
medicine bow - routt national forest
0.272727
lapland
0.272727
state of colorado
0.260870
state of wyoming
0.240000
LOWER IN state of colorado
0.210526
ph 5.4
0.200000
hokkaido
0.181818
stratovolcano
0.181818
snow field
0.166667
state of washington
0.162162
glacier
0.153846
kingdom of norway
0.150000
finland
0.150000
state of oregon
0.133333
topsoil
0.117647
forest ecosystem
0.117647
LOWER IN medicine bow - routt national forest
0.111111
LOWER IN arapaho national forest
0.111111
LOWER IN state of wyoming
0.111111
LOWER IN glacier peak wilderness
0.111111
LOWER IN state of washington
0.111111
LOWER IN snow
0.111111
LOWER IN snow covered soil
0.111111
non snow covered soil
0.111111
snow covered soil
0.111111
LOWER IN non snow covered soil
0.111111
LOWER IN lapland
0.111111
LOWER IN kingdom of norway
0.111111
LOWER IN sweden
0.105263
sweden
0.103448
depth (soil) 0-10cm
0.095238
LOWER IN finland
0.095238
LOWER IN united states of america
0.074074
japan
0.071429
LOWER IN winter
0.055556
winter
0.052632
summer
0.047619
LOWER IN summer
0.047619
united states of america
0.020952
soil
0.018349
Fraction of dbbact annotations with this term covered by the query
Term
Score
snow
0.800000
LOWER IN state of colorado
0.666667
depth (snow) 0-5cm
0.500000
glacier peak wilderness
0.500000
arapaho national forest
0.500000
medicine bow - routt national forest
0.500000
LOWER IN medicine bow - routt national forest
0.500000
LOWER IN arapaho national forest
0.500000
LOWER IN state of wyoming
0.500000
LOWER IN glacier peak wilderness
0.500000
LOWER IN state of washington
0.500000
ph 5.4
0.500000
LOWER IN snow
0.500000
LOWER IN snow covered soil
0.500000
non snow covered soil
0.500000
snow covered soil
0.500000
LOWER IN non snow covered soil
0.500000
lapland
0.500000
LOWER IN lapland
0.500000
LOWER IN kingdom of norway
0.500000
state of wyoming
0.333333
hokkaido
0.333333
stratovolcano
0.333333
depth 0-5cm
0.333333
LOWER IN sweden
0.333333
snow field
0.250000
state of colorado
0.200000
glacier
0.200000
LOWER IN finland
0.200000
state of washington
0.142857
state of oregon
0.142857
kingdom of norway
0.125000
finland
0.125000
topsoil
0.111111
forest ecosystem
0.111111
LOWER IN united states of america
0.090909
depth (soil) 0-10cm
0.076923
sweden
0.071429
LOWER IN winter
0.050000
japan
0.050000
winter
0.045455
summer
0.038462
LOWER IN summer
0.038462
united states of america
0.010638
soil
0.009901
Fraction of annotations for the query sequences containing the term
Term
Score
snow
0.937500
united states of america
0.687500
depth (snow) 0-5cm
0.375000
state of colorado
0.375000
depth 0-5cm
0.375000
glacier peak wilderness
0.187500
state of washington
0.187500
arapaho national forest
0.187500
state of wyoming
0.187500
medicine bow - routt national forest
0.187500
lapland
0.187500
kingdom of norway
0.187500
finland
0.187500
sweden
0.187500
LOWER IN state of colorado
0.125000
soil
0.125000
depth (soil) 0-10cm
0.125000
hokkaido
0.125000
topsoil
0.125000
ph 5.4
0.125000
forest ecosystem
0.125000
japan
0.125000
state of oregon
0.125000
snow field
0.125000
glacier
0.125000
stratovolcano
0.125000
LOWER IN medicine bow - routt national forest
0.062500
LOWER IN arapaho national forest
0.062500
LOWER IN state of wyoming
0.062500
LOWER IN glacier peak wilderness
0.062500
LOWER IN state of washington
0.062500
LOWER IN snow
0.062500
LOWER IN snow covered soil
0.062500
non snow covered soil
0.062500
summer
0.062500
LOWER IN winter
0.062500
snow covered soil
0.062500
winter
0.062500
LOWER IN non snow covered soil
0.062500
LOWER IN summer
0.062500
LOWER IN united states of america
0.062500
LOWER IN lapland
0.062500
LOWER IN finland
0.062500
LOWER IN kingdom of norway
0.062500
LOWER IN sweden
0.062500
Number of experiments associating the term to the sequence
Term
Score
snow
4.000000
united states of america
3.000000
state of colorado
2.000000
LOWER IN state of colorado
2.000000
depth (snow) 0-5cm
1.000000
glacier peak wilderness
1.000000
state of washington
1.000000
arapaho national forest
1.000000
state of wyoming
1.000000
medicine bow - routt national forest
1.000000
LOWER IN medicine bow - routt national forest
1.000000
LOWER IN arapaho national forest
1.000000
LOWER IN state of wyoming
1.000000
LOWER IN glacier peak wilderness
1.000000
LOWER IN state of washington
1.000000
soil
1.000000
depth (soil) 0-10cm
1.000000
hokkaido
1.000000
topsoil
1.000000
ph 5.4
1.000000
LOWER IN snow
1.000000
LOWER IN snow covered soil
1.000000
non snow covered soil
1.000000
summer
1.000000
LOWER IN winter
1.000000
forest ecosystem
1.000000
japan
1.000000
snow covered soil
1.000000
winter
1.000000
LOWER IN non snow covered soil
1.000000
LOWER IN summer
1.000000
state of oregon
1.000000
snow field
1.000000
glacier
1.000000
stratovolcano
1.000000
depth 0-5cm
1.000000
lapland
1.000000
LOWER IN united states of america
1.000000
kingdom of norway
1.000000
finland
1.000000
sweden
1.000000
LOWER IN lapland
1.000000
LOWER IN finland
1.000000
LOWER IN kingdom of norway
1.000000
LOWER IN sweden
1.000000
Exp. ID
User ID
Description
Date
Region
Sequences
Status
Flag
224
amnon
dominant united states of america, state of oregon, snow field, glacier, stratovolcano, snow
2017-10-26
v4
1 / 14
approved
No
511
amnon
dominant snow, depth 0-5cm, lapland, finland, sweden, kingdom of norway
2019-03-20
v4
1 / 15
approved
No
511
amnon
dominant snow, depth 0-5cm, united states of america, state of colorado
2019-03-20
v4
1 / 19
approved
No
915
amnon
dominant depth (snow) 0-5cm, glacier peak wilderness, snow, state of washington, united states of america
2022-07-02
v4
1 / 20
approved
No
915
amnon
dominant depth (snow) 0-5cm, arapaho national forest, medicine bow - routt national forest, snow, state of colorado, state of wyoming, united states of america
2022-07-02
v4
1 / 21
approved
No
511
amnon
high in lapland kingdom of norway finland sweden compared to united states of america state of colorado in snow depth 0-5cm
2019-03-20
v4
1 / 21
approved
No
511
amnon
high in united states of america state of colorado compared to lapland finland kingdom of norway sweden in snow depth 0-5cm
2019-03-20
v4
1 / 24
approved
No
915
amnon
common depth (snow) 0-5cm, glacier peak wilderness, state of washington, united states of america, snow
2022-07-02
v4
1 / 68
approved
No
356
amnon
lower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth (soil) 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )
2018-08-15
v4
1 / 78
approved
No
915
amnon
common arapaho national forest, state of wyoming, medicine bow - routt national forest, state of colorado, depth (snow) 0-5cm, snow, united states of america
2022-07-02
v4
1 / 91
approved
No
356
amnon
higher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth (soil) 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )
2018-08-15
v4
1 / 113
approved
No
511
amnon
common snow, depth 0-5cm, united states of america, state of colorado
2019-03-20
v4
1 / 134
approved
No
915
amnon
high in glacier peak wilderness state of washington compared to medicine bow - routt national forest arapaho national forest state of wyoming state of colorado in depth (snow) 0-5cm snow united states of america
2022-07-02
v4
1 / 155
approved
No
224
amnon
common united states of america, state of oregon, snow field, glacier, stratovolcano, snow
2017-10-26
v4
1 / 204
approved
No
511
amnon
common snow, depth 0-5cm, lapland, finland, sweden, kingdom of norway
2019-03-20
v4
1 / 213
approved
No
915
amnon
high in medicine bow - routt national forest arapaho national forest state of wyoming state of colorado compared to glacier peak wilderness state of washington in depth (snow) 0-5cm snow united states of america
2022-07-02
v4
1 / 263
approved
No
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