Summary for ontology term: state of california

Number of annotations with term: 136

Annotations:

common ontology terms
term enrichment score
TermScore
state of california0.965517
beach0.258427
pacific ocean0.242188
bodega bay0.153846
water0.144404
agave0.142857
desert0.140351
rice0.133333
oryza sativa0.133333
root0.127660
zostera marina0.123457
marine eelgrass0.123457
sea water0.121212
agave deserti0.108108
red abalone0.108108
white abalone0.108108
haliotis rufescens0.108108
haliotis sorenseni0.108108
sand0.102564
aerosol0.095890
united states of america0.095238
ocean water0.093023
ocean0.090909
rhizosphere0.088889
monterey bay0.083333
san francisco bay0.083333
adult0.083333
leaf0.080000
soil0.078947
air0.074468
mexico0.074074
LOWER IN control0.067416
control0.064103
infant0.059701
mallard0.057143
shell0.057143
anas platyrhynchos0.057143
santa cruz province0.057143
homo sapiens0.056795
subgingival plaque0.056497
dust0.055556
floor0.055556
aquarium0.055556
foot0.055556
female0.053763
cloaca0.052632
depth 5cm0.052632
feces0.047337
saliva0.044053
leaf surface0.043478
depth 75m0.043478
endosphere0.043478
drought environment0.042553
LOWER IN drought environment0.042553
grape0.042553
age 2 months0.042553
depth 300m0.042553
depth 5m0.042553
stem0.042553
vitis vinifera0.042553
LOWER IN root0.042105
age 1 year0.041667
LOWER IN sea water0.041667
LOWER IN soil0.040816
LOWER IN rhizosphere0.040816
surface water0.040816
ulcerative colitis0.039216
LOWER IN water0.038462
marine sediment0.036364
sediment0.033333
forager0.029412
root endosphere0.029412
depth 1500.029412
leaf endosphere0.029412
age 6 months0.029412
LOWER IN air0.029412
cleanroom0.029412
guanajuato0.029412
santa cruz county0.029412
LOWER IN leaf0.029197
nipple0.028986
apis mellifera0.028986
hospital0.028169
felis catus0.028169
LOWER IN periodontitis0.027027
periodontitis0.027027
research facility0.025559
skin0.023256
digestive system0.022222
flooded soil0.014925
LOWER IN leaf surface0.014925
influenza0.014925
LOWER IN depth 5m0.014925
LOWER IN depth 75m0.014925
LOWER IN agave0.014925
xylella fastidiosa temecula10.014925
pierce disease0.014925
LOWER IN influenza0.014925
LOWER IN flooded soil0.014925
LOWER IN age 2 months0.014925
Fraction of dbbact annotations with this term covered by the query
TermScore
state of california0.933333
agave deserti0.500000
shell0.500000
leaf surface0.500000
LOWER IN leaf surface0.500000
forager0.500000
depth 1500.500000
white abalone0.500000
bodega bay0.500000
mallard0.500000
LOWER IN depth 5m0.500000
LOWER IN depth 75m0.500000
leaf endosphere0.500000
aerosol0.500000
root endosphere0.500000
LOWER IN air0.500000
depth 75m0.500000
endosphere0.500000
monterey bay0.500000
cleanroom0.500000
LOWER IN agave0.500000
xylella fastidiosa temecula10.500000
red abalone0.500000
influenza0.500000
haliotis sorenseni0.500000
pierce disease0.500000
guanajuato0.500000
anas platyrhynchos0.500000
haliotis rufescens0.500000
age 6 months0.500000
santa cruz province0.500000
LOWER IN influenza0.500000
agave0.500000
LOWER IN flooded soil0.500000
san francisco bay0.500000
LOWER IN age 2 months0.500000
santa cruz county0.500000
LOWER IN subgingival plaque0.500000
flooded soil0.500000
LOWER IN aerosol0.500000
beach0.500000
LOWER IN leaf0.400000
drought environment0.333333
depth 150m0.333333
LOWER IN drought environment0.333333
dust0.333333
LOWER IN spring0.333333
floor0.333333
grape0.333333
vitis vinifera0.333333
LOWER IN age 1 year0.333333
LOWER IN depth 150m0.333333
aquarium0.333333
LOWER IN depth 0m0.333333
zostera marina0.333333
sand0.333333
depth 300m0.333333
foot0.333333
stem0.333333
age 2 months0.333333
marine eelgrass0.333333
LOWER IN sediment0.333333
LOWER IN sand0.333333
nipple0.333333
apis mellifera0.333333
depth 5m0.333333
LOWER IN marine sediment0.333333
LOWER IN depth 300m0.333333
LOWER IN root0.285714
root0.272727
age 1 year0.250000
rice0.250000
oryza sativa0.250000
LOWER IN diarrhea0.250000
pacific ocean0.250000
LOWER IN surface water0.250000
LOWER IN sea water0.250000
ocean water0.200000
hospital0.200000
LOWER IN rhizosphere0.200000
spring0.200000
cloaca0.200000
LOWER IN soil0.200000
depth 5cm0.200000
felis catus0.200000
mexico0.200000
surface water0.200000
sea water0.181818
desert0.166667
LOWER IN saliva0.142857
diarrhea0.142857
ulcerative colitis0.142857
LOWER IN ulcerative colitis0.142857
water0.137931
LOWER IN periodontitis0.125000
periodontitis0.125000
LOWER IN water0.125000
air0.125000
leaf0.117647
subgingival plaque0.111111
Fraction of annotations for the query sequences containing the term
TermScore
state of california1.000000
united states of america0.636364
pacific ocean0.234848
homo sapiens0.212121
beach0.174242
feces0.166667
water0.151515
adult0.136364
soil0.136364
desert0.121212
research facility0.121212
bodega bay0.090909
sea water0.090909
rice0.090909
ocean0.090909
oryza sativa0.090909
root0.083333
rhizosphere0.083333
agave0.083333
zostera marina0.075758
marine eelgrass0.075758
control0.075758
female0.075758
LOWER IN control0.068182
agave deserti0.060606
red abalone0.060606
white abalone0.060606
haliotis rufescens0.060606
infant0.060606
haliotis sorenseni0.060606
sand0.060606
leaf0.060606
ocean water0.060606
air0.053030
aerosol0.053030
monterey bay0.045455
san francisco bay0.045455
mexico0.045455
subgingival plaque0.037879
saliva0.037879
mallard0.030303
dust0.030303
floor0.030303
shell0.030303
aquarium0.030303
cloaca0.030303
anas platyrhynchos0.030303
foot0.030303
santa cruz province0.030303
depth 5cm0.030303
leaf surface0.022727
drought environment0.022727
sediment0.022727
LOWER IN drought environment0.022727
LOWER IN water0.022727
age 1 year0.022727
grape0.022727
depth 75m0.022727
endosphere0.022727
LOWER IN soil0.022727
age 2 months0.022727
depth 300m0.022727
depth 5m0.022727
stem0.022727
ulcerative colitis0.022727
LOWER IN root0.022727
marine sediment0.022727
vitis vinifera0.022727
LOWER IN rhizosphere0.022727
LOWER IN sea water0.022727
surface water0.022727
LOWER IN periodontitis0.015152
LOWER IN leaf0.015152
forager0.015152
root endosphere0.015152
periodontitis0.015152
depth 1500.015152
hospital0.015152
leaf endosphere0.015152
age 6 months0.015152
LOWER IN air0.015152
cleanroom0.015152
nipple0.015152
skin0.015152
guanajuato0.015152
apis mellifera0.015152
digestive system0.015152
felis catus0.015152
santa cruz county0.015152
flooded soil0.007576
summer0.007576
LOWER IN saliva0.007576
LOWER IN leaf surface0.007576
influenza0.007576
LOWER IN depth 5m0.007576
LOWER IN depth 75m0.007576
LOWER IN spring0.007576
LOWER IN depth 0m0.007576
LOWER IN diarrhea0.007576
LOWER IN age 1 year0.007576
Exp. ID User ID Description Date Sequences
171amnonhigh freq. in soil with rice growth irrigation protocol (highfreq united states of america, soil, state of california, depth 5cm)2017-07-251 / 1
171amnonhighfreq root, united states of america, oryza sativa, state of california, rice2017-07-251 / 2
171amnonhighfreq united states of america, soil, rhizosphere, oryza sativa, state of california, rice2017-07-251 / 2
304amnonhighfreq united states of america, beach, sand, state of california, pacific ocean, monterey bay2018-03-121 / 2
278amnon high in control compared to periodontitis in homo sapiens united states of america saliva adult state of california 2018-01-231 / 3
360amnonhighfreq desert, soil, rhizosphere, state of california, agave, agave deserti2018-08-211 / 3
16amnon high in diarrhea compared to control in feces felis catus state of california 2016-11-081 / 3
236amnonhighfreq ocean, leaf, zostera marina, state of california, bodega bay, marine eelgrass2017-11-071 / 4
360amnonhighfreq desert, soil, state of california2018-08-211 / 4
236amnonhighfreq ocean, sediment, marine sediment, zostera marina, state of california, bodega bay, marine eelgrass2017-11-071 / 5
189amnonhighfreq united states of america, stem, vitis vinifera, state of california, grape, endosphere2017-08-301 / 5
308amnonhigh freq. in spacecraft assembly cleanroom floor (highfreq united states of america, dust, state of california, floor, cleanroom)2018-03-311 / 5
360amnonhighfreq desert, leaf, state of california, agave, agave deserti, leaf surface2018-08-211 / 6
52amnonhighfreq homo sapiens, nipple, skin, state of california2017-01-191 / 6
52amnoncommon homo sapiens, nipple, skin, state of california2017-01-191 / 7
304amnonhighfreq united states of america, beach, air, aerosol, state of california, pacific ocean, monterey bay2018-03-121 / 7
394amnon high in ulcerative colitis compared to control in feces homo sapiens united states of america adult state of california 2018-11-061 / 8
236amnonhighfreq root, ocean, zostera marina, state of california, bodega bay, marine eelgrass2017-11-071 / 8
284amnon high in age 2 months compared to age 1 year in feces homo sapiens female infant state of california 2018-01-271 / 8
308amnonhighfreq feces, united states of america, research facility, state of california, red abalone, haliotis rufescens2018-03-301 / 9
304amnonhighfreq united states of america, beach, sand, state of california, pacific ocean, santa cruz province2018-03-121 / 9
304amnonhighfreq united states of america, beach, sand, state of california, pacific ocean, san francisco bay2018-03-121 / 10
304amnonhighfreq united states of america, beach, air, aerosol, state of california, pacific ocean, santa cruz province2018-03-121 / 10
308amnonhighfreq united states of america, research facility, foot, state of california, haliotis sorenseni, white abalone2018-03-301 / 10
57amnonhighfreq digestive system, apis mellifera, state of california, forager2017-01-311 / 11
308amnonhigh freq. in neonatal intensive care unit floor (highfreq united states of america, dust, hospital, state of california, floor)2018-03-311 / 11
171amnonhigh in draught soil compared to soil with rice growth irrigation protocol ( high in drought environment compared to control flooded soil in united states of america soil state of california depth 5cm )2017-07-251 / 11
308amnonhighfreq feces, united states of america, research facility, state of california, haliotis sorenseni, white abalone2018-03-301 / 12
308amnonhighfreq united states of america, research facility, foot, state of california, red abalone, haliotis rufescens2018-03-301 / 13
360amnonhighfreq root, desert, state of california, agave, agave deserti, root endosphere2018-08-211 / 13
308amnonhighfreq united states of america, research facility, shell, state of california, red abalone, haliotis rufescens2018-03-301 / 14
308amnonhigh freq. in water of aquarium with red abalone (highfreq united states of america, research facility, water, sea water, aquarium, state of california, red abalone, haliotis rufescens)2018-03-301 / 15
308amnonhighfreq united states of america, research facility, shell, state of california, haliotis sorenseni, white abalone2018-03-301 / 15
304amnonhighfreq united states of america, beach, water, sea water, state of california, pacific ocean, monterey bay2018-03-121 / 15
317amnonhighfreq united states of america, water, ocean water, state of california, pacific ocean, depth 300m, depth 75m, depth 1502018-04-151 / 16
304amnonhighfreq united states of america, beach, water, sea water, state of california, pacific ocean, santa cruz county2018-03-121 / 16
317amnonhighfreq united states of america, water, surface water, ocean water, state of california, pacific ocean, depth 5m2018-04-151 / 17
81amnonhighfreq cloaca, anas platyrhynchos, state of california, mallard2017-03-051 / 17
278amnonhighfreq homo sapiens, united states of america, saliva, adult, state of california2018-01-231 / 17
308amnonhigh freq. in aquarium water with white abalone (highfreq united states of america, research facility, water, sea water, aquarium, state of california, haliotis sorenseni, white abalone)2018-03-301 / 18
284amnonhighfreq feces, homo sapiens, female, infant, state of california, age 6 months2018-01-271 / 18
304amnonhighfreq united states of america, beach, air, aerosol, state of california, pacific ocean, san francisco bay2018-03-121 / 18
284amnoncommon feces, homo sapiens, female, infant, state of california, age 2 months2018-01-271 / 20
394amnonhighfreq feces, homo sapiens, united states of america, ulcerative colitis, adult, state of california2018-11-061 / 20
284amnonhighfreq feces, homo sapiens, female, infant, state of california, age 2 months2018-01-271 / 20
304amnonhighfreq united states of america, beach, water, sea water, state of california, pacific ocean, san francisco bay2018-03-121 / 21
236amnonhighfreq ocean, water, ocean water, state of california, pacific ocean, bodega bay2017-11-071 / 21
278amnonhighfreq homo sapiens, united states of america, adult, state of california, subgingival plaque2018-01-231 / 21
284amnonhighfreq feces, homo sapiens, female, adult, state of california2018-01-271 / 22
278amnon high in periodontitis compared to control in homo sapiens united states of america saliva adult state of california 2018-01-231 / 22
394amnonhighfreq feces, homo sapiens, control, united states of america, adult, state of california2018-11-061 / 23
308amnoncommon in spacecraft assembly cleanroom floor (common united states of america, dust, state of california, floor, cleanroom)2018-03-311 / 23
284amnonhighfreq feces, homo sapiens, female, infant, state of california, age 1 year2018-01-271 / 23
284amnoncommon feces, homo sapiens, female, infant, state of california, age 6 months2018-01-271 / 25
284amnoncommon feces, homo sapiens, female, infant, state of california, age 1 year2018-01-271 / 30
81amnoncommon cloaca, anas platyrhynchos, state of california, mallard2017-03-051 / 30
360amnonhighfreq desert, leaf, state of california, agave, agave deserti, leaf endosphere2018-08-201 / 30
189amnonhigherin stems of grape vines with pierce disease compared to control ( high in xylella fastidiosa temecula1 pierce disease compared to control in united states of america stem vitis vinifera state of california grape endosphere )2017-08-301 / 31
57amnoncommon digestive system, apis mellifera, state of california, forager2017-01-311 / 33
284amnon high in age 1 year compared to age 2 months in feces homo sapiens female infant state of california 2018-01-271 / 35
81amnonhigh in influenza A positive mallards compared to healthy mallards ( high in influenza compared to control in cloaca anas platyrhynchos state of california mallard )2017-03-051 / 37
189amnoncommon united states of america, stem, vitis vinifera, state of california, grape, endosphere2017-08-301 / 43
171amnonlow in draught soil compared to soil with rice growth irrigation protocol ( high in control flooded soil compared to drought environment in united states of america soil state of california depth 5cm )2017-07-251 / 46
360amnoncommon desert, leaf, state of california, agave, agave deserti, leaf endosphere2018-08-201 / 48
16amnon high in control compared to diarrhea in feces felis catus state of california 2016-11-081 / 51
278amnon high in periodontitis compared to control in homo sapiens united states of america adult state of california subgingival plaque 2018-01-231 / 52
360amnoncommon root, desert, state of california, agave, agave deserti, root endosphere2018-08-211 / 52
394amnoncommon feces, homo sapiens, united states of america, ulcerative colitis, adult, state of california2018-11-061 / 56
308amnoncommon in neonatal intensive care unit floor (common united states of america, dust, hospital, state of california, floor)2018-03-311 / 57
317amnoncommon united states of america, water, surface water, ocean water, state of california, pacific ocean, depth 5m2018-04-151 / 62
394amnon high in control compared to ulcerative colitis in feces homo sapiens united states of america adult state of california 2018-11-061 / 71
171amnonlower in rice rhizosphere soil compared to bulk soil (no rice) ( high in soil compared to rhizosphere in united states of america oryza sativa state of california rice )2017-07-251 / 73
304amnonlower in seawater compared sea spray aerosol ( high in air aerosol compared to water sea water in united states of america beach state of california pacific ocean )2018-03-121 / 77
394amnoncommon feces, homo sapiens, control, united states of america, adult, state of california2018-11-061 / 86
278amnoncommon homo sapiens, united states of america, adult, state of california, subgingival plaque2018-01-231 / 96
360amnon high in spring compared to summer in desert soil rhizosphere state of california mexico 2018-08-211 / 97
317amnoncommon united states of america, water, ocean water, state of california, pacific ocean, depth 300m, depth 75m, depth 1502018-04-151 / 101
284amnoncommon feces, homo sapiens, female, adult, state of california2018-01-271 / 105
278amnon high in control compared to periodontitis in homo sapiens united states of america adult state of california subgingival plaque 2018-01-231 / 107
81amnonhigh in healthy mallards compared to influenza A positive mallars ( high in control compared to influenza in cloaca anas platyrhynchos state of california mallard )2017-03-051 / 131
278amnoncommon homo sapiens, united states of america, saliva, adult, state of california2018-01-231 / 133
171amnonhigher in rice rhizosphere soil compared to bulk soil (no rice) ( high in rhizosphere compared to soil in united states of america oryza sativa state of california rice )2017-07-251 / 140
278amnon high in saliva compared to subgingival plaque in homo sapiens united states of america adult state of california 2018-01-231 / 146
278amnon high in subgingival plaque compared to saliva in homo sapiens united states of america adult state of california 2018-01-231 / 149
171amnoncommon root, united states of america, oryza sativa, state of california, rice2017-07-251 / 156
171amnonhigher in roots compared to rhizosphere soil in rice ( high in root compared to rhizosphere in united states of america oryza sativa state of california rice )2017-07-251 / 213
360amnon high in summer compared to spring in desert soil rhizosphere state of california mexico 2018-08-211 / 214
308amnoncommon in water of aquarium with red abalone (common united states of america, research facility, water, sea water, aquarium, state of california, red abalone, haliotis rufescens)2018-03-301 / 240
308amnoncommon feces, united states of america, research facility, state of california, red abalone, haliotis rufescens2018-03-301 / 258
304amnonhigher in seawater compared sea spray aerosol ( high in water sea water compared to air aerosol in united states of america beach state of california pacific ocean )2018-03-121 / 260
304amnoncommon united states of america, beach, air, aerosol, state of california, pacific ocean, monterey bay2018-03-121 / 263
171amnonhigher in roots of drought irrigated rice compared to irrigated conrols ( high in drought environment compared to control in root united states of america oryza sativa state of california rice )2017-07-251 / 282
236amnon high in leaf compared to root in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-071 / 287
171amnonlower in roots of drought irrigated rice compared to irrigated conrols ( high in control compared to drought environment in root united states of america oryza sativa state of california rice )2017-07-251 / 288
308amnoncommon united states of america, research facility, foot, state of california, haliotis sorenseni, white abalone2018-03-301 / 368
360amnoncommon desert, soil, rhizosphere, state of california, agave, agave deserti2018-08-211 / 432
236amnoncommon root, ocean, zostera marina, state of california, bodega bay, marine eelgrass2017-11-071 / 483
236amnoncommon ocean, leaf, zostera marina, state of california, bodega bay, marine eelgrass2017-11-071 / 505
304amnoncommon united states of america, beach, air, aerosol, state of california, pacific ocean, santa cruz province2018-03-121 / 518
317amnonlower in depth>75m compared to depth >5m in ocean water ( high in surface water depth 5m compared to depth 300m depth 75m depth 150m in united states of america water ocean water state of california pacific ocean )2018-04-151 / 544
304amnonhigher in seawater compared to beach sand ( high in water sea water compared to sand in united states of america beach state of california pacific ocean )2018-03-121 / 547
304amnoncommon united states of america, beach, air, aerosol, state of california, pacific ocean, san francisco bay2018-03-121 / 558
308amnoncommon united states of america, research facility, shell, state of california, red abalone, haliotis rufescens2018-03-301 / 579
308amnoncommon united states of america, research facility, foot, state of california, red abalone, haliotis rufescens2018-03-301 / 592
360amnon high in rhizosphere agave compared to soil in desert state of california mexico 2018-08-211 / 593
308amnoncommon feces, united states of america, research facility, state of california, haliotis sorenseni, white abalone2018-03-301 / 609
308amnoncommon united states of america, research facility, shell, state of california, haliotis sorenseni, white abalone2018-03-301 / 632
360amnoncommon desert, soil, state of california2018-08-211 / 637
360amnonhigher in leaf surface compared to soil in agave plants ( high in leaf leaf surface compared to soil in desert state of california mexico guanajuato agave )2018-08-211 / 645
360amnoncommon desert, leaf, state of california, agave, agave deserti, leaf surface2018-08-211 / 649
304amnoncommon united states of america, beach, water, sea water, state of california, pacific ocean, monterey bay2018-03-121 / 667
236amnon high in root compared to sediment marine sediment in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-071 / 674
308amnoncommon in aquarium water with white abalone (common united states of america, research facility, water, sea water, aquarium, state of california, haliotis sorenseni, white abalone)2018-03-301 / 727
171amnon high in drought environment compared to control in united states of america soil rhizosphere oryza sativa state of california rice 2017-07-251 / 770
171amnoncommon united states of america, soil, rhizosphere, oryza sativa, state of california, rice2017-07-251 / 772
236amnon high in root compared to leaf in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-071 / 819
317amnonhigher in depth>75m compared to depth >5m in ocean water ( high in depth 300m depth 75m depth 150m compared to surface water depth 5m depth 0m in united states of america water ocean water state of california pacific ocean )2018-04-151 / 889
171amnoncommon in soil with rice growth irrigation protocol (common united states of america, soil, state of california, depth 5cm)2017-07-251 / 890
360amnon high in soil compared to rhizosphere agave in desert state of california mexico 2018-08-211 / 992
304amnoncommon united states of america, beach, sand, state of california, pacific ocean, monterey bay2018-03-121 / 1038
360amnonlower in leaf surface compared to soil in agave plants ( high in soil compared to leaf leaf surface in desert state of california mexico guanajuato agave )2018-08-211 / 1108
236amnoncommon ocean, water, ocean water, state of california, pacific ocean, bodega bay2017-11-071 / 1156
171amnon high in control compared to drought environment in united states of america soil rhizosphere oryza sativa state of california rice 2017-07-251 / 1164
304amnoncommon united states of america, beach, water, sea water, state of california, pacific ocean, san francisco bay2018-03-121 / 1166
304amnoncommon united states of america, beach, water, sea water, state of california, pacific ocean, santa cruz county2018-03-121 / 1425
304amnonlower in seawater compared to beach sand ( high in sand compared to water sea water in united states of america beach state of california pacific ocean )2018-03-121 / 1599
304amnoncommon united states of america, beach, sand, state of california, pacific ocean, san francisco bay2018-03-121 / 1799
304amnoncommon united states of america, beach, sand, state of california, pacific ocean, santa cruz province2018-03-121 / 1838
236amnoncommon ocean, sediment, marine sediment, zostera marina, state of california, bodega bay, marine eelgrass2017-11-071 / 1904
304amnonhigher in beach sand compared to sea water and sea spray ( high in sand compared to water air sea water in united states of america beach state of california pacific ocean )2018-03-121 / 2070
236amnon high in sediment marine sediment compared to root in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-071 / 2745
171amnonlower in roots compared to rhizosphere soil in rice ( high in soil rhizosphere compared to root in united states of america oryza sativa state of california rice )2017-07-251 / 7628

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