Summary for ontology term: state of michigan

Number of annotations with term: 29

Annotations:

common ontology terms
term enrichment score
TermScore
state of michigan0.923077
tonsil0.603774
pig0.336134
sus scrofa0.336134
age 6-10 weeks0.171429
age 12-19 weeks0.171429
age 1-3 weeks0.171429
farm0.160643
trachea0.157895
bronchus0.157895
age 4 weeks0.136364
lung0.127660
age 17-290.121212
age 8 hours0.121212
nipple0.114286
clostridium difficile intestinal infectious disease0.102564
vagina0.097561
diarrhea0.093023
adult0.068279
LOWER IN age 12-19 weeks0.064516
LOWER IN age 6-10 weeks0.064516
LOWER IN age 1-3 weeks0.064516
LOWER IN age 4 weeks0.062500
skin0.051948
homo sapiens0.047090
united states of america0.041921
feces0.027842
Fraction of dbbact annotations with this term covered by the query
TermScore
state of michigan0.857143
tonsil0.666667
age 17-290.500000
age 6-10 weeks0.500000
LOWER IN age 12-19 weeks0.500000
age 12-19 weeks0.500000
LOWER IN age 6-10 weeks0.500000
age 1-3 weeks0.500000
LOWER IN age 1-3 weeks0.500000
age 8 hours0.500000
trachea0.333333
bronchus0.333333
nipple0.333333
LOWER IN age 4 weeks0.333333
pig0.222222
sus scrofa0.222222
clostridium difficile intestinal infectious disease0.200000
age 4 weeks0.200000
lung0.166667
vagina0.166667
diarrhea0.142857
farm0.090909
skin0.041667
adult0.038961
homo sapiens0.025478
united states of america0.021505
feces0.014925
Fraction of annotations for the query sequences containing the term
TermScore
state of michigan1.000000
united states of america0.827586
pig0.689655
sus scrofa0.689655
farm0.689655
tonsil0.551724
homo sapiens0.310345
adult0.275862
feces0.206897
lung0.103448
trachea0.103448
bronchus0.103448
age 6-10 weeks0.103448
age 12-19 weeks0.103448
age 1-3 weeks0.103448
age 4 weeks0.103448
clostridium difficile intestinal infectious disease0.068966
diarrhea0.068966
age 17-290.068966
vagina0.068966
skin0.068966
nipple0.068966
age 8 hours0.068966
contamination0.034483
LOWER IN age 12-19 weeks0.034483
LOWER IN age 6-10 weeks0.034483
LOWER IN age 4 weeks0.034483
LOWER IN age 1-3 weeks0.034483
Exp. ID User ID Description Date Region Flag Sequences
87amnonhigher in controls compared to lung and oral (contamination)2017-03-07v4No1 / 5
388amnonhighfreq pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 6-10 weeks2018-11-03v4No1 / 11
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 4 weeks2018-11-04v4No1 / 11
389amnonhighfreq pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 13
388amnonhighfreq pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 12-19 weeks2018-11-03v4No1 / 14
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 8 hours2018-11-04v4No1 / 14
94amnoncommon homo sapiens, clostridium difficile intestinal infectious disease, feces, state of michigan, diarrhea2017-03-12v4No1 / 16
87amnonhighfreq homo sapiens, bronchus, lung, trachea, state of michigan2017-03-07v4No1 / 17
289amnonhighfreq homo sapiens, feces, adult, united states of america, state of michigan2018-02-01v4No1 / 17
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, skin, nipple, adult2018-11-04v4No1 / 17
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, adult, tonsil2018-11-04v4No1 / 17
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 1-3 weeks2018-11-04v4No1 / 17
484amnonhighfreq feces, adult, age 17-29, united states of america, state of michigan, homo sapiens2019-02-13v4No1 / 20
94amnonhighfreq homo sapiens, clostridium difficile intestinal infectious disease, feces, state of michigan, diarrhea2017-03-12v4No1 / 22
87amnoncommon homo sapiens, lung, trachea, bronchus, state of michigan2017-03-07v4No1 / 22
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 8 hours2018-11-04v4No1 / 22
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, adult, tonsil2018-11-04v4No1 / 41
389amnoncommon pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 43
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 4 weeks2018-11-04v4No1 / 71
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, skin, nipple, adult2018-11-04v4No1 / 72
484amnoncommon feces, united states of america, adult, state of michigan, age 17-29, homo sapiens2019-02-13v4No1 / 76
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 1-3 weeks2018-11-04v4No1 / 80
289amnoncommon homo sapiens, feces, adult, united states of america, state of michigan2018-02-01v4No1 / 109
388amnoncommon pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 6-10 weeks2018-11-03v4No1 / 112
388amnoncommon pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 12-19 weeks2018-11-03v4No1 / 114
389amnon high in age 4 weeks compared to age 1-3 weeks in pig sus scrofa united states of america state of michigan farm tonsil 2018-11-04v4No1 / 168
389amnon high in age 1-3 weeks compared to age 4 weeks in pig sus scrofa united states of america state of michigan farm tonsil 2018-11-04v4No1 / 189
388amnon high in age 6-10 weeks compared to age 12-19 weeks in pig sus scrofa tonsil farm united states of america state of michigan 2018-11-03v4No1 / 210
388amnon high in age 12-19 weeks compared to age 6-10 weeks in pig sus scrofa tonsil farm united states of america state of michigan 2018-11-03v4No1 / 231

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