Summary for ontology term: state of michigan

Number of annotations with term: 35

Annotations:

common ontology terms
term enrichment score
TermScore
state of michigan0.933333
tonsil0.426667
pig0.242424
sus scrofa0.242424
age 6-10 weeks0.146341
age 12-19 weeks0.146341
age 1-3 weeks0.146341
trachea0.146341
bronchus0.136364
buccal mucosa0.127660
oropharynx0.127660
age 4 weeks0.120000
farm0.119403
mouth mucosa0.107143
age 17-290.102564
age 8 hours0.102564
diarrhea0.102564
nipple0.097561
lung0.096774
clostridium difficile intestinal infectious disease0.085106
vagina0.078431
LOWER IN age 12-19 weeks0.054054
LOWER IN age 6-10 weeks0.054054
LOWER IN age 1-3 weeks0.054054
adult0.052632
LOWER IN age 4 weeks0.052632
LOWER IN oropharynx0.052632
LOWER IN buccal mucosa0.052632
LOWER IN mouth mucosa0.050000
united states of america0.043134
skin0.042105
homo sapiens0.040541
feces0.020583
Fraction of dbbact annotations with this term covered by the query
TermScore
state of michigan0.875000
age 17-290.500000
age 6-10 weeks0.500000
LOWER IN age 12-19 weeks0.500000
age 12-19 weeks0.500000
LOWER IN age 6-10 weeks0.500000
age 1-3 weeks0.500000
LOWER IN age 1-3 weeks0.500000
age 8 hours0.500000
trachea0.500000
diarrhea0.500000
tonsil0.400000
nipple0.333333
LOWER IN age 4 weeks0.333333
LOWER IN oropharynx0.333333
LOWER IN buccal mucosa0.333333
bronchus0.333333
buccal mucosa0.250000
oropharynx0.250000
age 4 weeks0.200000
LOWER IN mouth mucosa0.200000
clostridium difficile intestinal infectious disease0.166667
pig0.153846
sus scrofa0.153846
mouth mucosa0.142857
vagina0.125000
lung0.111111
farm0.066667
skin0.033333
adult0.028169
united states of america0.022124
homo sapiens0.021277
feces0.010949
Fraction of annotations for the query sequences containing the term
TermScore
state of michigan1.000000
united states of america0.857143
pig0.571429
sus scrofa0.571429
farm0.571429
tonsil0.457143
homo sapiens0.428571
adult0.400000
feces0.171429
age 6-10 weeks0.085714
age 12-19 weeks0.085714
age 1-3 weeks0.085714
age 4 weeks0.085714
buccal mucosa0.085714
mouth mucosa0.085714
oropharynx0.085714
lung0.085714
trachea0.085714
bronchus0.085714
age 17-290.057143
vagina0.057143
skin0.057143
nipple0.057143
age 8 hours0.057143
clostridium difficile intestinal infectious disease0.057143
diarrhea0.057143
LOWER IN age 12-19 weeks0.028571
LOWER IN age 6-10 weeks0.028571
LOWER IN age 4 weeks0.028571
LOWER IN age 1-3 weeks0.028571
LOWER IN oropharynx0.028571
LOWER IN buccal mucosa0.028571
LOWER IN mouth mucosa0.028571
contamination0.028571
Exp. ID User ID Description Date Region Flag Sequences
87amnonhigher in controls compared to lung and oral (contamination)2017-03-07v4No1 / -3
388amnondominant pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 6-10 weeks2018-11-03v4No1 / 3
389amnondominant pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 4 weeks2018-11-04v4No1 / 3
389amnondominant pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 5
731amnonhigher in oropharingeal otic fluid drainage compared to buccal mucosa ( high in oropharynx compared to buccal mucosa mouth mucosa in adult state of michigan united states of america homo sapiens )2021-01-09v4No1 / 5
388amnondominant pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 12-19 weeks2018-11-03v4No1 / 6
389amnondominant pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 8 hours2018-11-04v4No1 / 6
94amnoncommon homo sapiens, clostridium difficile intestinal infectious disease, feces, state of michigan, diarrhea2017-03-12v4No1 / 8
389amnondominant pig, sus scrofa, united states of america, state of michigan, farm, skin, nipple, adult2018-11-04v4No1 / 9
389amnondominant pig, sus scrofa, united states of america, state of michigan, farm, adult, tonsil2018-11-04v4No1 / 9
389amnondominant pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 1-3 weeks2018-11-04v4No1 / 9
87amnondominant homo sapiens, bronchus, lung, trachea, state of michigan2017-03-07v4No1 / 9
289amnondominant homo sapiens, feces, adult, united states of america, state of michigan2018-02-01v4No1 / 9
484amnondominant feces, adult, age 17-29, united states of america, state of michigan, homo sapiens2019-02-13v4No1 / 12
731amnondominant buccal mucosa, mouth mucosa, adult, state of michigan, united states of america, homo sapiens2021-01-09v4No1 / 13
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 8 hours2018-11-04v4No1 / 14
87amnoncommon homo sapiens, lung, trachea, bronchus, state of michigan2017-03-07v4No1 / 14
94amnondominant homo sapiens, clostridium difficile intestinal infectious disease, feces, state of michigan, diarrhea2017-03-12v4No1 / 14
731amnondominant in orophringeal otic secretion drainage (dominant homo sapiens, united states of america, state of michigan, adult, oropharynx)2021-01-09v4No1 / 22
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, adult, tonsil2018-11-04v4No1 / 33
389amnoncommon pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 35
731amnonlower in oropharingeal otic fluid drainage compared to buccal mucosa ( high in buccal mucosa mouth mucosa compared to oropharynx in adult state of michigan united states of america homo sapiens )2021-01-09v4No1 / 41
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 4 weeks2018-11-04v4No1 / 63
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, skin, nipple, adult2018-11-04v4No1 / 64
484amnoncommon feces, united states of america, adult, state of michigan, age 17-29, homo sapiens2019-02-13v4No1 / 68
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 1-3 weeks2018-11-04v4No1 / 72
731amnoncommon in orophringeal otic secretion drainage (common oropharynx, adult, state of michigan, united states of america, homo sapiens)2021-01-09v4No1 / 77
731amnoncommon buccal mucosa, mouth mucosa, adult, state of michigan, united states of america, homo sapiens2021-01-09v4No1 / 85
289amnoncommon homo sapiens, feces, adult, united states of america, state of michigan2018-02-01v4No1 / 101
388amnoncommon pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 6-10 weeks2018-11-03v4No1 / 104
388amnoncommon pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 12-19 weeks2018-11-03v4No1 / 106
389amnon high in age 4 weeks compared to age 1-3 weeks in pig sus scrofa united states of america state of michigan farm tonsil 2018-11-04v4No1 / 160
389amnon high in age 1-3 weeks compared to age 4 weeks in pig sus scrofa united states of america state of michigan farm tonsil 2018-11-04v4No1 / 181
388amnon high in age 6-10 weeks compared to age 12-19 weeks in pig sus scrofa tonsil farm united states of america state of michigan 2018-11-03v4No1 / 202
388amnon high in age 12-19 weeks compared to age 6-10 weeks in pig sus scrofa tonsil farm united states of america state of michigan 2018-11-03v4No1 / 223

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