Summary for ontology term: state of oregon

Number of annotations with term: 28

Annotations:

common ontology terms
term enrichment score
TermScore
state of oregon0.845070
rhesus macaque0.363636
carbonate0.300000
lithified carbonate blocks0.300000
hydrate ridge0.300000
depth 500-1000m0.260870
age 9 weeks0.232558
LOWER IN state of oregon0.222222
LOWER IN state of california0.222222
stratovolcano0.222222
macaca mulatta0.210526
snow field0.181818
active methane seep0.176471
low activity methane seep0.176471
glacier0.166667
oil seep0.162162
monkey0.148148
age 4 weeks0.139535
age 8 months0.125000
sediment0.117647
age 21 days0.117647
snow0.111111
age 1 month0.105263
zebra fish0.105263
danio rerio0.100000
juvenile organism0.100000
c57bl/60.097561
captive0.097561
ocean0.096774
age 3 months0.095238
pacific ocean0.088235
fish0.071429
LOWER IN low activity methane seep0.066667
LOWER IN oil seep0.066667
LOWER IN active methane seep0.066667
LOWER IN zinc deficiency0.066667
LOWER IN low zinc diet0.066667
zinc deficiency0.066667
low zinc diet0.066667
LOWER IN age 9 weeks0.066667
state of california0.064516
LOWER IN age 4 weeks0.064516
female0.060060
intestine0.052632
research facility0.040632
mouse0.034188
united states of america0.032508
mus musculus0.030534
feces0.013051
adult0.011236
LOWER IN control0.010101
control0.010000
Fraction of dbbact annotations with this term covered by the query
TermScore
state of oregon0.833333
carbonate0.500000
lithified carbonate blocks0.500000
hydrate ridge0.500000
active methane seep0.500000
LOWER IN low activity methane seep0.500000
low activity methane seep0.500000
LOWER IN oil seep0.500000
LOWER IN active methane seep0.500000
LOWER IN state of oregon0.500000
rhesus macaque0.500000
LOWER IN state of california0.500000
stratovolcano0.500000
age 8 months0.500000
LOWER IN zinc deficiency0.500000
LOWER IN low zinc diet0.500000
zinc deficiency0.500000
low zinc diet0.500000
LOWER IN age 9 weeks0.500000
age 9 weeks0.333333
depth 500-1000m0.333333
oil seep0.333333
LOWER IN age 4 weeks0.333333
age 21 days0.333333
snow field0.250000
snow0.250000
age 4 weeks0.200000
age 1 month0.200000
glacier0.200000
zebra fish0.200000
macaca mulatta0.166667
danio rerio0.166667
juvenile organism0.166667
age 3 months0.142857
monkey0.100000
sediment0.074074
fish0.071429
ocean0.062500
c57bl/60.058824
captive0.058824
pacific ocean0.055556
state of california0.041667
intestine0.041667
female0.032787
research facility0.020979
mouse0.018182
united states of america0.016598
mus musculus0.016129
feces0.006601
adult0.006098
LOWER IN control0.005882
control0.005814
Fraction of annotations for the query sequences containing the term
TermScore
state of oregon0.857143
united states of america0.785714
research facility0.642857
feces0.571429
female0.357143
mus musculus0.285714
mouse0.285714
c57bl/60.285714
sediment0.285714
monkey0.285714
rhesus macaque0.285714
macaca mulatta0.285714
captive0.285714
pacific ocean0.214286
ocean0.214286
carbonate0.214286
lithified carbonate blocks0.214286
depth 500-1000m0.214286
hydrate ridge0.214286
age 9 weeks0.178571
LOWER IN state of oregon0.142857
state of california0.142857
LOWER IN state of california0.142857
snow field0.142857
glacier0.142857
stratovolcano0.142857
age 4 weeks0.107143
oil seep0.107143
active methane seep0.107143
low activity methane seep0.107143
age 1 month0.071429
age 3 months0.071429
snow0.071429
age 8 months0.071429
adult0.071429
fish0.071429
zebra fish0.071429
danio rerio0.071429
juvenile organism0.071429
age 21 days0.071429
intestine0.071429
LOWER IN low activity methane seep0.035714
LOWER IN oil seep0.035714
LOWER IN active methane seep0.035714
LOWER IN age 4 weeks0.035714
control0.035714
LOWER IN zinc deficiency0.035714
LOWER IN low zinc diet0.035714
zinc deficiency0.035714
low zinc diet0.035714
LOWER IN control0.035714
LOWER IN age 9 weeks0.035714
Exp. ID User ID Description Date Region Flag Sequences
486amnondominant pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, low activity methane seep2019-02-19v4No1 / 4
435amnondominant mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-23v4No1 / 7
435amnondominant mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-23v4No1 / 7
435amnon high in zinc deficiency low zinc diet compared to control in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-23v4No1 / 7
435amnon high in control compared to zinc deficiency low zinc diet in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-23v4No1 / 8
486amnondominant pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, oil seep, active methane seep2019-02-19v4No1 / 9
224amnondominant united states of america, state of oregon, snow field, glacier, stratovolcano, snow2017-10-26v4No1 / 14
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-23v4No1 / 15
437amnondominant fish, zebra fish, danio rerio, juvenile organism, age 21 days, intestine, research facility, united states of america, state of oregon2018-12-26v4No1 / 20
224amnondominant united states of america, state of oregon, snow field, glacier, stratovolcano, sediment2017-10-26v4No1 / 21
435amnonlower in mice at end of experiment compared to initial sample ( high in age 4 weeks compared to age 9 weeks in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse )2018-12-23v4No1 / 23
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-23v4No1 / 30
671amnon high in state of oregon compared to state of california in age 3 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 38
671amnon high in state of california compared to state of oregon in age 3 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 52
437amnoncommon fish, zebra fish, danio rerio, juvenile organism, age 21 days, intestine, research facility, united states of america, state of oregon2018-12-26v4No1 / 54
671amnon high in state of california compared to state of oregon in age 8 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 66
435amnonhigher in mice at end of experiment compared to initial sample ( high in age 9 weeks compared to age 4 weeks in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon )2018-12-23v4No1 / 73
224amnoncommon united states of america, state of oregon, snow field, glacier, stratovolcano, sediment2017-10-26v4No1 / 87
671amnon high in state of oregon compared to state of california in age 1 month united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 140
486amnoncommon pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, oil seep, active methane seep2019-02-19v4No1 / 163
224amnoncommon united states of america, state of oregon, snow field, glacier, stratovolcano, snow2017-10-26v4No1 / 204
671amnon high in state of california compared to state of oregon in age 1 month united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 217
671amnon high in state of oregon compared to state of california in age 8 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 232
671amnon high in state of california compared to state of oregon in female adult united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 355
486amnoncommon pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, low activity methane seep2019-02-19v4No1 / 371
671amnon high in state of oregon compared to state of california in female adult united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 534
486amnon high in oil seep active methane seep compared to low activity methane seep in pacific ocean ocean sediment carbonate lithified carbonate blocks depth 500-1000m hydrate ridge state of oregon 2019-02-19v4No1 / 649
486amnon high in low activity methane seep compared to oil seep active methane seep in pacific ocean ocean sediment carbonate lithified carbonate blocks depth 500-1000m hydrate ridge state of oregon 2019-02-19v4No1 / 1791

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