Summary for ontology term: state of oregon

Number of annotations with term: 20

Annotations:

common ontology terms
term enrichment score
TermScore
state of oregon1.000000
depth 500-1000m0.375000
age 9 weeks0.333333
stratovolcano0.285714
snow field0.250000
glacier0.250000
oil seep0.230769
age 4 weeks0.206897
sediment0.173913
snow0.153846
age 21 days0.153846
juvenile organism0.142857
c57bl/60.137931
zebra fish0.133333
danio rerio0.125000
pacific ocean0.115385
ocean0.109091
fish0.105263
LOWER IN zinc deficiency0.090909
LOWER IN low zinc diet0.090909
zinc deficiency0.090909
low zinc diet0.090909
LOWER IN age 9 weeks0.090909
LOWER IN age 4 weeks0.086957
intestine0.083333
female0.063492
mouse0.043011
research facility0.042553
mus musculus0.037383
united states of america0.036301
LOWER IN control0.016260
control0.016000
feces0.011527
Fraction of dbbact annotations with this term covered by the query
TermScore
state of oregon1.000000
depth 500-1000m0.500000
oil seep0.500000
stratovolcano0.500000
age 9 weeks0.500000
LOWER IN zinc deficiency0.500000
LOWER IN low zinc diet0.500000
zinc deficiency0.500000
low zinc diet0.500000
LOWER IN age 9 weeks0.500000
snow field0.333333
glacier0.333333
snow0.333333
LOWER IN age 4 weeks0.333333
age 4 weeks0.333333
age 21 days0.333333
juvenile organism0.250000
zebra fish0.200000
danio rerio0.166667
sediment0.111111
fish0.111111
c57bl/60.083333
pacific ocean0.071429
intestine0.071429
ocean0.066667
female0.034483
mouse0.022727
research facility0.022222
mus musculus0.019608
united states of america0.018634
LOWER IN control0.009709
control0.009524
feces0.005848
Fraction of annotations for the query sequences containing the term
TermScore
state of oregon1.000000
united states of america0.700000
research facility0.500000
sediment0.400000
mus musculus0.400000
mouse0.400000
feces0.400000
c57bl/60.400000
female0.400000
pacific ocean0.300000
ocean0.300000
carbonate0.300000
lithified carbonate blocks0.300000
depth 500-1000m0.300000
hydrate ridge0.300000
age 9 weeks0.250000
snow field0.200000
glacier0.200000
stratovolcano0.200000
oil seep0.150000
active methane seep0.150000
low activity methane seep0.150000
age 4 weeks0.150000
snow0.100000
fish0.100000
zebra fish0.100000
danio rerio0.100000
juvenile organism0.100000
age 21 days0.100000
intestine0.100000
LOWER IN low activity methane seep0.050000
LOWER IN oil seep0.050000
LOWER IN active methane seep0.050000
LOWER IN age 4 weeks0.050000
control0.050000
LOWER IN zinc deficiency0.050000
LOWER IN low zinc diet0.050000
zinc deficiency0.050000
low zinc diet0.050000
LOWER IN control0.050000
LOWER IN age 9 weeks0.050000
Exp. ID User ID Description Date Sequences
486amnonhighfreq pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, low activity methane seep2019-02-191 / 4
435amnon high in zinc deficiency low zinc diet compared to control in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-231 / 7
435amnonhighfreq mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-231 / 7
435amnonhighfreq mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-231 / 7
435amnon high in control compared to zinc deficiency low zinc diet in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-231 / 8
486amnonhighfreq pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, oil seep, active methane seep2019-02-191 / 9
224amnonhighfreq united states of america, state of oregon, snow field, glacier, stratovolcano, snow2017-10-261 / 14
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-231 / 15
437amnonhighfreq fish, zebra fish, danio rerio, juvenile organism, age 21 days, intestine, research facility, united states of america, state of oregon2018-12-261 / 20
224amnonhighfreq united states of america, state of oregon, snow field, glacier, stratovolcano, sediment2017-10-261 / 21
435amnonlower in mice at end of experiment compared to initial sample ( high in age 4 weeks compared to age 9 weeks in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse )2018-12-231 / 23
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-231 / 30
437amnoncommon fish, zebra fish, danio rerio, juvenile organism, age 21 days, intestine, research facility, united states of america, state of oregon2018-12-261 / 54
435amnonhigher in mice at end of experiment compared to initial sample ( high in age 9 weeks compared to age 4 weeks in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon )2018-12-231 / 73
224amnoncommon united states of america, state of oregon, snow field, glacier, stratovolcano, sediment2017-10-261 / 87
486amnoncommon pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, oil seep, active methane seep2019-02-191 / 163
224amnoncommon united states of america, state of oregon, snow field, glacier, stratovolcano, snow2017-10-261 / 204
486amnoncommon pacific ocean, ocean, sediment, carbonate, lithified carbonate blocks, depth 500-1000m, hydrate ridge, state of oregon, low activity methane seep2019-02-191 / 371
486amnon high in oil seep active methane seep compared to low activity methane seep in pacific ocean ocean sediment carbonate lithified carbonate blocks depth 500-1000m hydrate ridge state of oregon 2019-02-191 / 649
486amnon high in low activity methane seep compared to oil seep active methane seep in pacific ocean ocean sediment carbonate lithified carbonate blocks depth 500-1000m hydrate ridge state of oregon 2019-02-191 / 1791

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