Summary for ontology term: state of washington

Number of annotations with term: 25

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGGGGATGCAAGCGTTATCCGGAATGATCGGGCGTAAAGCGTCTGTAGGTAGCTCCTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGAAGGGCGGTGGAAACTACCGAGCTGGAGTACGGTAGGGGCAGGGGGAATTTCCGG0.258065
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGGGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTCCTTAAGTCCGTTGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACTAAGCTGGAGTGCGGTAGGGGCAGAGGGAATTTCCGG0.258065
d__BacteriaGACGGGGGGGGCAAGTGTTATTCGGAATGACTGGGCGTAAAGGGCACGTAGGCAGTGAATCAGGTTGAAAGTCAAAGACGCCAGCTCAACTGGCGGAATGCTTTCAAAACCAATTCACTCGAGTGGGATAGAGGGGAGTGGAATTTCGTG0.256410
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCTGCCGTTAAATCCCAGGGCTTAACCCTGGATAAGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.232558
d__BacteriaTACGTAGAAGACTAGTGTTATTCATATTTAGTAGGTTTAAAGGGTACCTAGACGGCATTATTAGCCCAAAACAGGGTACGGTTTTGCTAGAGTTTTATAAGAGGAGGGGAGTATTCATAGAGTAGAGATAAAATTTTTTGATACTATGAC0.228571
d__Bacteria;p__"Verrucomicrobia";c__Spartobacteria;g__Spartobacteria_genera_incertae_sedisTACAGAGGTCTCAAGCGTTGTTCGGATTCATTGGGCGTAAAGGGTGCGTAGGTGGCGCGCTAAGTCAGGTGTGAAATCTCGGGGCTTAACTCCGAAACTGCATTTGATACTGGCGTGCTTGAGGACTGGAGAGGAGACTGGAATTCATGG0.200000
d__Bacteria;p__"Proteobacteria";c__DeltaproteobacteriaGACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGTGTGTAGGCGGCCCCGCAAGTCGGATGTGAAAGCCCCGGGCTCAACCCGGGAAGTGCACCCGAAACTGCAGGGCTTGAGTACCGGAGAGGTTGGTGGAATTCTCGG0.200000
d__BacteriaTACGTAGAAGACAAGTGTTATTCATCTTTAGTGGGTTTAAAGGGTACCTAGACAGAAAATAAAGCCTAAAAAGGGACTAGTTTTCTAGAGTTTTATGTGAGAATGTTGAACTATCAGAGGAGAGTCAAAATTTTTTGATACTGGTGGGAC0.200000
d__BacteriaTACGTAAAAGACTAGTGTTATTCATCATGAATAGGTTTAAAGGGTACCTAGACGGTAGTACTAGCCCGTAATAGGGTACAGTATTTCTAGAGTTTTATATGAGAAGAGGAGTATTCATTGTGTAGAGATAAAATTTGTTGATACTTTGAC0.200000
d__BacteriaTACGTAGAAGACAAGTGTTATTCATCTTTAGTGGGTTTAAAGGGTACCTAGACAGAAAATAAAGCCTTAAAAGGGACTGATTTTCTAGAGTTTTATGTGAGAATGTTGAACTATCAGAGGAAAGTCAGAATTTTTTGATACTGGTGGGAC0.200000

Annotations:

common ontology terms
Fraction of dbbact annotations with this term covered by the query
TermScore
state of washington1.000000
saline lake1.000000
deep lake1.000000
shark bay1.000000
neonate1.000000
LOWER IN neonate1.000000
intact branch0.500000
LOWER IN severed branch0.500000
olympic national park0.500000
canopy soil0.500000
epiphytic material0.500000
severed branch0.500000
LOWER IN intact branch0.500000
microbial mat0.500000
microbial biomat0.500000
temperate rainforest0.500000
acute transudative otitis media0.500000
muc5ac deficient0.500000
LOWER IN muc5ac0.500000
ldlr-0.500000
linoleic acid0.500000
middle ear0.333333
forested area0.250000
age 1 week0.250000
LOWER IN age 1 week0.250000
LOWER IN caloric restriction diet0.200000
caloric restriction diet0.200000
juvenile organism0.166667
macaca mulatta0.166667
LOWER IN juvenile organism0.166667
obsolete_juvenile stage0.100000
high fat diet0.083333
LOWER IN high fat diet0.083333
monkey0.071429
mouse chow0.066667
LOWER IN mouse chow0.066667
c57bl/60.055556
australia0.043478
diet0.030303
child0.027778
mouse0.017544
united states of america0.016194
mus musculus0.015873
research facility0.013605
soil0.010101
control0.005405
LOWER IN control0.005405
homo sapiens0.003690
feces0.003185
microbialite forming mat0.000000
age 20 months0.000000
LOWER IN age 20 months0.000000
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.960000
state of washington0.960000
research facility0.520000
soil0.320000
olympic national park0.320000
mus musculus0.280000
c57bl/60.280000
mouse0.280000
ldlr-0.280000
canopy soil0.240000
epiphytic material0.240000
feces0.240000
macaca mulatta0.240000
monkey0.240000
high fat diet0.240000
diet0.200000
intact branch0.120000
severed branch0.120000
homo sapiens0.120000
middle ear0.120000
acute transudative otitis media0.120000
child0.120000
obsolete_juvenile stage0.120000
juvenile organism0.120000
age 20 months0.120000
age 1 week0.120000
neonate0.120000
forested area0.080000
temperate rainforest0.080000
LOWER IN control0.080000
LOWER IN severed branch0.040000
LOWER IN intact branch0.040000
microbial mat0.040000
australia0.040000
saline lake0.040000
deep lake0.040000
shark bay0.040000
microbial biomat0.040000
microbialite forming mat0.040000
muc5ac deficient0.040000
LOWER IN muc5ac0.040000
control0.040000
LOWER IN caloric restriction diet0.040000
caloric restriction diet0.040000
linoleic acid0.040000
mouse chow0.040000
LOWER IN high fat diet0.040000
LOWER IN mouse chow0.040000
LOWER IN age 1 week0.040000
LOWER IN neonate0.040000
LOWER IN juvenile organism0.040000
LOWER IN age 20 months0.040000
Exp. ID User ID Description Date Region Flag Sequences
813amnondominant united states of america, soil, state of washington, forested area, olympic national park, temperate rainforest2021-06-22v4No1 / 1
326amnonhigher in lpr- mice supplemented with linoleic acid compared to control high fat diet ( high in linoleic acid diet compared to control in united states of america research facility mus musculus high fat diet c57bl/6 state of washington mouse ldlr- )2018-04-29v4No1 / 2
285amnonlower in individuals with muc5ac ( high in muc5ac deficient compared to muc5ac in homo sapiens united states of america middle ear acute transudative otitis media child state of washington obsolete_juvenile stage )2018-01-27v4No1 / 4
326amnonhigher in lpr- mice in caloric restriction compared to control high fat diet ( high in diet caloric restriction diet compared to control in united states of america research facility mus musculus high fat diet c57bl/6 state of washington mouse ldlr- )2018-04-29v4No1 / 5
813amnondominant united states of america, soil, state of washington, olympic national park, canopy soil, intact branch, epiphytic material2021-06-22v4No1 / 6
813amnondominant united states of america, soil, state of washington, olympic national park, canopy soil, severed branch, epiphytic material2021-06-22v4No1 / 6
326amnonlower in lpr- mice in caloric restriction compared to control high fat diet ( high in control diet compared to caloric restriction diet in united states of america research facility mus musculus high fat diet c57bl/6 state of washington mouse ldlr- )2018-04-29v4No1 / 12
285amnonhigh freq. in effluent from middle ear (dominant homo sapiens, united states of america, middle ear, acute transudative otitis media, child, state of washington, obsolete_juvenile stage)2018-01-27v4No1 / 14
876amnondominant feces, united states of america, research facility, juvenile organism, macaca mulatta, state of washington, monkey, age 20 months2022-03-06v4No1 / 14
876amnondominant feces, united states of america, research facility, macaca mulatta, state of washington, age 1 week, monkey, neonate2022-03-06v4No1 / 14
326amnondominant united states of america, research facility, mus musculus, high fat diet, c57bl/6, state of washington, mouse, ldlr-2018-04-29v4No1 / 15
285amnoncommon in effluent from middle ear (common homo sapiens, united states of america, middle ear, acute transudative otitis media, child, state of washington, obsolete_juvenile stage)2018-01-27v4No1 / 19
876amnoncommon feces, united states of america, research facility, macaca mulatta, state of washington, age 1 week, monkey, neonate2022-03-06v4No1 / 30
876amnon high in age 1 week neonate compared to juvenile organism age 20 months in feces united states of america research facility macaca mulatta state of washington monkey 2022-03-06v4No1 / 43
326amnon high in diet high fat diet compared to mouse chow in united states of america research facility mus musculus c57bl/6 state of washington mouse ldlr- 2018-04-29v4No1 / 65
326amnoncommon united states of america, research facility, mus musculus, high fat diet, c57bl/6, state of washington, mouse, ldlr-2018-04-29v4No1 / 122
326amnon high in diet mouse chow compared to high fat diet in united states of america research facility mus musculus c57bl/6 state of washington mouse ldlr- 2018-04-29v4No1 / 189
886amnoncommon microbial mat, australia, saline lake, deep lake, shark bay, microbial biomat, microbialite forming mat2022-03-27v1No1 / 233
876amnoncommon feces, united states of america, research facility, juvenile organism, macaca mulatta, state of washington, monkey, age 20 months2022-03-06v4No1 / 364
813amnonhigher in epiphytic materiall attached to intact branch compared to severed suspended branch ( high in intact branch compared to severed branch in united states of america soil state of washington olympic national park canopy soil epiphytic material )2021-06-22v4No1 / 390
813amnoncommon united states of america, soil, state of washington, olympic national park, canopy soil, intact branch, epiphytic material2021-06-22v4No1 / 475
813amnoncommon united states of america, soil, state of washington, olympic national park, canopy soil, severed branch, epiphytic material2021-06-22v4No1 / 633
813amnoncommon united states of america, soil, state of washington, forested area, olympic national park, temperate rainforest2021-06-22v4No1 / 740
813amnonlower in epiphytic materiall attached to intact branch compared to severed suspended branch ( high in severed branch compared to intact branch in united states of america soil state of washington olympic national park canopy soil epiphytic material )2021-06-22v4No1 / 768
876amnon high in juvenile organism age 20 months compared to age 1 week neonate in feces united states of america research facility macaca mulatta state of washington monkey 2022-03-06v4No1 / 1065

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