Summary for ontology term: sus scrofa

Number of annotations with term: 43

Annotations:

common ontology terms
term enrichment score
TermScore
sus scrofa0.923077
pig0.923077
tonsil0.477612
farm0.472441
state of michigan0.388350
jinhua city prefecture0.156863
jinhua pig0.156863
cecal content0.156863
tibet autonomous region0.145455
united kingdom0.143791
caecum0.135338
age 6-10 weeks0.122449
age 12-19 weeks0.122449
age 1-3 weeks0.122449
jejunum0.115385
age 4 weeks0.115385
ileum0.112676
right colon0.109091
left colon0.109091
duodenum0.089552
age 8 hours0.085106
province of quebec0.081633
LOWER IN jejunum0.081633
nipple0.081633
LOWER IN right colon0.078431
LOWER IN left colon0.078431
gastrointestinal system0.078431
vagina0.078431
pregnancy0.075472
zoological garden0.075472
state of tennessee0.075472
LOWER IN duodenum0.070175
LOWER IN caecum0.065574
canada0.063492
adult0.055300
diet0.048193
china0.047761
skin0.047059
intestinal contents0.044444
LOWER IN intestinal contents0.044444
LOWER IN sucram0.044444
standard feed0.044444
sucram0.044444
LOWER IN standard feed0.044444
LOWER IN age 12-19 weeks0.044444
LOWER IN age 6-10 weeks0.044444
LOWER IN age 1-3 weeks0.044444
farm 10.044444
LOWER IN farm 20.044444
farm 20.044444
LOWER IN farm 10.044444
LOWER IN tibetan pig0.044444
LOWER IN tibetan swine0.044444
tibetan pig0.044444
tibetan swine0.044444
LOWER IN sus scrofa0.044444
LOWER IN pig0.044444
LOWER IN mucosa0.043478
LOWER IN age 4 weeks0.043478
mucosa0.042553
LOWER IN ileum0.040000
female0.039604
united states of america0.035958
feces0.032064
Fraction of dbbact annotations with this term covered by the query
TermScore
sus scrofa0.875000
pig0.875000
tonsil0.666667
intestinal contents0.500000
LOWER IN intestinal contents0.500000
LOWER IN sucram0.500000
standard feed0.500000
sucram0.500000
LOWER IN standard feed0.500000
age 6-10 weeks0.500000
LOWER IN age 12-19 weeks0.500000
age 12-19 weeks0.500000
LOWER IN age 6-10 weeks0.500000
age 1-3 weeks0.500000
LOWER IN age 1-3 weeks0.500000
age 8 hours0.500000
jinhua city prefecture0.500000
jinhua pig0.500000
farm 10.500000
LOWER IN farm 20.500000
farm 20.500000
LOWER IN farm 10.500000
cecal content0.500000
LOWER IN tibetan pig0.500000
LOWER IN tibetan swine0.500000
tibetan pig0.500000
tibetan swine0.500000
LOWER IN sus scrofa0.500000
LOWER IN pig0.500000
farm0.357143
province of quebec0.333333
LOWER IN mucosa0.333333
LOWER IN jejunum0.333333
jejunum0.333333
state of michigan0.333333
nipple0.333333
LOWER IN age 4 weeks0.333333
age 4 weeks0.333333
tibet autonomous region0.333333
mucosa0.250000
LOWER IN right colon0.250000
LOWER IN left colon0.250000
right colon0.250000
left colon0.250000
gastrointestinal system0.250000
vagina0.250000
pregnancy0.200000
zoological garden0.200000
state of tennessee0.200000
ileum0.142857
LOWER IN duodenum0.142857
LOWER IN ileum0.142857
duodenum0.125000
LOWER IN caecum0.111111
canada0.100000
united kingdom0.100000
caecum0.100000
diet0.050000
skin0.047619
female0.034483
adult0.034483
china0.027397
united states of america0.018634
feces0.017544
Fraction of annotations for the query sequences containing the term
TermScore
sus scrofa0.976744
pig0.976744
farm0.697674
united states of america0.511628
state of michigan0.465116
tonsil0.372093
united kingdom0.255814
caecum0.209302
feces0.186047
china0.186047
adult0.139535
ileum0.093023
jinhua city prefecture0.093023
jinhua pig0.093023
cecal content0.093023
tibet autonomous region0.093023
right colon0.069767
left colon0.069767
duodenum0.069767
jejunum0.069767
age 6-10 weeks0.069767
age 12-19 weeks0.069767
age 1-3 weeks0.069767
age 4 weeks0.069767
canada0.046512
province of quebec0.046512
female0.046512
pregnancy0.046512
zoological garden0.046512
state of tennessee0.046512
LOWER IN duodenum0.046512
LOWER IN jejunum0.046512
LOWER IN caecum0.046512
LOWER IN right colon0.046512
LOWER IN left colon0.046512
diet0.046512
gastrointestinal system0.046512
vagina0.046512
skin0.046512
nipple0.046512
age 8 hours0.046512
LOWER IN mucosa0.023256
intestinal contents0.023256
mucosa0.023256
LOWER IN intestinal contents0.023256
LOWER IN ileum0.023256
LOWER IN sucram0.023256
standard feed0.023256
sucram0.023256
LOWER IN standard feed0.023256
LOWER IN age 12-19 weeks0.023256
LOWER IN age 6-10 weeks0.023256
LOWER IN age 4 weeks0.023256
LOWER IN age 1-3 weeks0.023256
farm 10.023256
LOWER IN farm 20.023256
farm 20.023256
LOWER IN farm 10.023256
LOWER IN tibetan pig0.023256
LOWER IN tibetan swine0.023256
tibetan pig0.023256
tibetan swine0.023256
LOWER IN sus scrofa0.023256
LOWER IN pig0.023256
Exp. ID User ID Description Date Sequences
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-261 / 1
256amnonhighfreq sus scrofa, pig, united kingdom, duodenum, jejunum, ileum2017-11-261 / 10
388amnonhighfreq pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 6-10 weeks2018-11-031 / 11
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 4 weeks2018-11-041 / 11
424amnonhighfreq sus scrofa, pig, jinhua city prefecture, china, jinhua pig, feces, farm2018-12-061 / 12
399amnonhighfreq feces, united states of america, zoological garden, state of tennessee, sus scrofa, pig2018-11-161 / 13
389amnonhighfreq pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-041 / 13
388amnonhighfreq pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 12-19 weeks2018-11-031 / 14
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 8 hours2018-11-041 / 14
470amnonhighfreq sus scrofa, pig, canada, farm, province of quebec, feces, female, adult, pregnancy2019-01-141 / 15
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, skin, nipple, adult2018-11-041 / 17
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, adult, tonsil2018-11-041 / 17
389amnonhighfreq pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 1-3 weeks2018-11-041 / 17
256amnonhighfreq sus scrofa, pig, united kingdom, caecum, right colon, left colon2017-11-261 / 19
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 8 hours2018-11-041 / 22
314amnonhighfreq caecum, cecal content, china, tibet autonomous region, farm, sus scrofa, pig2018-04-101 / 23
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, adult, tonsil2018-11-041 / 41
389amnoncommon pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-041 / 43
256amnonlower in intestinal contents compared to mucosal scraping in pig caecum ( high in mucosa compared to intestinal contents in sus scrofa pig united kingdom caecum )2017-11-261 / 50
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 4 weeks2018-11-041 / 71
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, skin, nipple, adult2018-11-041 / 72
389amnoncommon pig, sus scrofa, united states of america, state of michigan, farm, tonsil, age 1-3 weeks2018-11-041 / 80
256amnonhigher in intestinal contents compared to mucosal scraping in pig caecum ( high in intestinal contents compared to mucosa in sus scrofa pig united kingdom caecum )2017-11-261 / 103
256amnonhigher in control diet compared to diet enriched with sucram in pig gut ( high in diet standard feed compared to sucram in gastrointestinal system sus scrofa united kingdom pig )2017-11-261 / 109
388amnoncommon pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 6-10 weeks2018-11-031 / 112
388amnoncommon pig, sus scrofa, tonsil, farm, united states of america, state of michigan, age 12-19 weeks2018-11-031 / 114
424amnonfarm dependent in feces of pigs with same genetic background ( high in farm 2 compared to farm 1 in sus scrofa pig jinhua city prefecture china jinhua pig feces farm )2018-12-061 / 136
314amnon high in sus scrofa pig compared to tibetan pig tibetan swine in caecum cecal content china tibet autonomous region farm 2018-04-101 / 136
314amnon high in tibetan pig tibetan swine compared to sus scrofa pig in caecum cecal content china tibet autonomous region farm 2018-04-101 / 157
389amnon high in age 4 weeks compared to age 1-3 weeks in pig sus scrofa united states of america state of michigan farm tonsil 2018-11-041 / 168
424amnonfarm dependent in feces of pigs with same genetic background ( high in farm 1 compared to farm 2 in sus scrofa pig jinhua city prefecture china jinhua pig feces farm )2018-12-061 / 171
389amnon high in age 1-3 weeks compared to age 4 weeks in pig sus scrofa united states of america state of michigan farm tonsil 2018-11-041 / 189
388amnon high in age 6-10 weeks compared to age 12-19 weeks in pig sus scrofa tonsil farm united states of america state of michigan 2018-11-031 / 210
256amnonlower in control diet compared to diet enriched with sucram in pig gut ( high in diet sucram compared to standard feed in sus scrofa pig united kingdom gastrointestinal system )2017-11-261 / 227
388amnon high in age 12-19 weeks compared to age 6-10 weeks in pig sus scrofa tonsil farm united states of america state of michigan 2018-11-031 / 231
399amnoncommon feces, united states of america, zoological garden, state of tennessee, sus scrofa, pig2018-11-161 / 319
256amnoncommon sus scrofa, pig, united kingdom, duodenum, jejunum, ileum2017-11-261 / 380
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-261 / 387
314amnoncommon caecum, cecal content, china, tibet autonomous region, farm, sus scrofa, pig2018-04-101 / 402
424amnoncommon sus scrofa, pig, jinhua city prefecture, china, jinhua pig, feces, farm2018-12-061 / 452
470amnoncommon sus scrofa, pig, canada, farm, province of quebec, feces, female, adult, pregnancy2019-01-141 / 457
256amnoncommon sus scrofa, pig, united kingdom, caecum, right colon, left colon2017-11-261 / 490
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-261 / 740

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