Summary for ontology term: terrestrial biome

Number of annotations with term: 61

Annotations:

common ontology terms
term enrichment score
TermScore
urban biome0.406375
forest ecosystem0.316623
woodland area0.298932
temperate grassland biome0.246914
topsoil0.233010
park0.227848
central park0.227848
depth 0-10cm0.220183
peat soil0.198020
new york city0.185567
ph0.170732
nanger granti0.164384
kenya0.164384
tropical grassland biome0.164384
gazelle0.164384
central america0.164384
flooded grassland biome0.164384
fen0.151899
building0.151899
dense settlement biome0.145985
alouatta pigra0.115942
howler monkey0.115942
temperate woodland biome0.115942
temperate deciduos forest0.115942
subpolar coniferous forest biome0.115942
boreal forest0.115942
depth 5 cm0.115942
ivy0.115942
hedera ibernica0.115942
soil0.112881
sphagnum bog0.109589
wetland area0.109589
united kingdom0.104348
hawaii0.103896
leaf0.099174
peatland0.098765
city0.094340
belgium0.089888
bathroom0.089552
shower0.089552
tile0.089552
building wall0.089552
kitchen0.089552
sink0.089552
state of florida0.066116
LOWER IN ph<50.061538
ph<50.061538
LOWER IN ph&gt;50.061538
tropical broadleaf forest biome0.061538
dry forest0.061538
LOWER IN tropical moist broadleaf forest biome0.061538
tropical moist broadleaf forest biome0.061538
LOWER IN dry forest0.061538
mediterranean forest biome0.061538
depth 20cm0.061538
depth 20 cm0.061538
subtropical broadleaf forest biome0.061538
train0.061538
boston0.061538
terrestrial biome0.061538
achatinella mustelina0.061538
environmental system determined by an organism0.061538
organic material0.061538
forest biome0.061538
LOWER IN ph&lt;60.059701
alouatta palliata0.059701
mantled howler monkey0.059701
guangdong province0.059701
whole plant0.059701
tanzania0.059701
depth 5cm0.056338
breast milk0.056338
hospital0.054795
age0.040404
LOWER IN ph&lt;70.031746
ph<7, ph>60.031746
LOWER IN ph&gt;70.031746
ph>5, ph<6.50.031746
LOWER IN ph&gt;6.50.031746
ph<5.50.031746
LOWER IN ph&gt;5.50.031746
ph<30.031746
LOWER IN ph&gt;30.031746
ph>30.031746
LOWER IN ph&lt;30.031746
LOWER IN timepoint0.031746
LOWER IN kitchen0.031746
LOWER IN sink0.031746
LOWER IN bathroom0.031746
LOWER IN shower0.031746
LOWER IN tile0.031746
LOWER IN building wall0.031746
LOWER IN moor0.031746
LOWER IN forest ecosystem0.031746
moor0.031746
LOWER IN dense settlement biome0.031746
LOWER IN male0.031250
ph>70.031250
ph>60.031250
ph<60.031250
Fraction of dbbact annotations with this term covered by the query
TermScore
urban biome0.750000
dense settlement biome0.666667
nanger granti0.500000
kenya0.500000
tropical grassland biome0.500000
gazelle0.500000
park0.500000
central park0.500000
LOWER IN ph&lt;70.500000
ph<7, ph>60.500000
LOWER IN ph&gt;70.500000
ph>5, ph<6.50.500000
LOWER IN ph&lt;50.500000
LOWER IN ph&gt;6.50.500000
ph<5.50.500000
LOWER IN ph&gt;5.50.500000
ph<50.500000
LOWER IN ph&gt;50.500000
alouatta pigra0.500000
howler monkey0.500000
tropical broadleaf forest biome0.500000
central america0.500000
dry forest0.500000
LOWER IN tropical moist broadleaf forest biome0.500000
tropical moist broadleaf forest biome0.500000
LOWER IN dry forest0.500000
temperate woodland biome0.500000
temperate deciduos forest0.500000
subpolar coniferous forest biome0.500000
boreal forest0.500000
ph<30.500000
LOWER IN ph&gt;30.500000
ph>30.500000
LOWER IN ph&lt;30.500000
mediterranean forest biome0.500000
temperate grassland biome0.500000
depth 20cm0.500000
flooded grassland biome0.500000
depth 20 cm0.500000
subtropical broadleaf forest biome0.500000
train0.500000
boston0.500000
depth 5 cm0.500000
LOWER IN timepoint0.500000
bathroom0.500000
shower0.500000
tile0.500000
building wall0.500000
kitchen0.500000
sink0.500000
LOWER IN kitchen0.500000
LOWER IN sink0.500000
terrestrial biome0.500000
achatinella mustelina0.500000
environmental system determined by an organism0.500000
organic material0.500000
forest biome0.500000
LOWER IN bathroom0.500000
LOWER IN shower0.500000
LOWER IN tile0.500000
LOWER IN building wall0.500000
ivy0.500000
hedera ibernica0.500000
LOWER IN moor0.500000
LOWER IN forest ecosystem0.500000
moor0.500000
LOWER IN dense settlement biome0.500000
forest ecosystem0.444444
woodland area0.428571
LOWER IN male0.333333
ph0.333333
ph>70.333333
ph>60.333333
LOWER IN ph&lt;60.333333
ph<60.333333
LOWER IN ph&gt;60.333333
alouatta palliata0.333333
mantled howler monkey0.333333
ph>50.333333
sphagnum bog0.333333
wetland area0.333333
fen0.333333
guangdong province0.333333
LOWER IN drought environment0.333333
drought environment0.333333
timepoint0.333333
building0.333333
whole plant0.333333
tanzania0.333333
topsoil0.285714
new york city0.250000
depth 0-10cm0.250000
peat soil0.250000
hawaii0.250000
peatland0.200000
depth 5cm0.200000
breast milk0.200000
hospital0.166667
old age0.166667
LOWER IN young age0.166667
Fraction of annotations for the query sequences containing the term
TermScore
soil0.508197
urban biome0.278689
forest ecosystem0.245902
feces0.229508
woodland area0.229508
topsoil0.196721
depth 0-10cm0.196721
peat soil0.163934
temperate grassland biome0.163934
park0.147541
new york city0.147541
central park0.147541
ph0.114754
nanger granti0.098361
kenya0.098361
tropical grassland biome0.098361
gazelle0.098361
central america0.098361
fen0.098361
flooded grassland biome0.098361
united kingdom0.098361
building0.098361
united states of america0.098361
leaf0.098361
city0.081967
dense settlement biome0.081967
alouatta pigra0.065574
howler monkey0.065574
state of florida0.065574
temperate woodland biome0.065574
temperate deciduos forest0.065574
subpolar coniferous forest biome0.065574
boreal forest0.065574
peatland0.065574
sphagnum bog0.065574
wetland area0.065574
depth 5 cm0.065574
hawaii0.065574
belgium0.065574
ivy0.065574
hedera ibernica0.065574
bathroom0.049180
shower0.049180
tile0.049180
building wall0.049180
kitchen0.049180
sink0.049180
LOWER IN ph&lt;60.032787
LOWER IN ph&lt;50.032787
ph<50.032787
LOWER IN ph&gt;50.032787
tropical broadleaf forest biome0.032787
dry forest0.032787
LOWER IN tropical moist broadleaf forest biome0.032787
tropical moist broadleaf forest biome0.032787
LOWER IN dry forest0.032787
alouatta palliata0.032787
mantled howler monkey0.032787
mediterranean forest biome0.032787
depth 5cm0.032787
depth 20cm0.032787
depth 20 cm0.032787
guangdong province0.032787
subtropical broadleaf forest biome0.032787
china0.032787
train0.032787
boston0.032787
terrestrial biome0.032787
achatinella mustelina0.032787
environmental system determined by an organism0.032787
organic material0.032787
forest biome0.032787
whole plant0.032787
tanzania0.032787
hospital0.032787
breast milk0.032787
homo sapiens0.032787
age0.032787
female0.016393
LOWER IN male0.016393
male0.016393
LOWER IN female0.016393
ph>70.016393
LOWER IN ph&lt;70.016393
ph>60.016393
ph<7, ph>60.016393
LOWER IN ph&gt;70.016393
ph>5, ph<6.50.016393
LOWER IN ph&gt;6.50.016393
ph<60.016393
LOWER IN ph&gt;60.016393
ph<5.50.016393
LOWER IN ph&gt;5.50.016393
ph>50.016393
ph<30.016393
LOWER IN ph&gt;30.016393
ph>30.016393
LOWER IN ph&lt;30.016393
control0.016393
LOWER IN drought environment0.016393
Exp. ID User ID Description Date Region Flag Sequences
100amnon high in ph ph>5, ph<6.5 compared to ph<5 ph>6.5 in soil urban biome park new york city central park 2017-04-03v4No1 / 1
100amnondominant soil, urban biome, park, new york city, central park2017-04-03v4No1 / 1
357amnonhigh freq. in temperate deciduous forests around the world (dominant soil, topsoil, depth 0-10cm, temperate woodland biome, temperate deciduos forest, woodland area, forest ecosystem)2018-08-18v4No1 / 1
357amnondominant soil, topsoil, depth 0-10cm, mediterranean forest biome, forest ecosystem, woodland area2018-08-19v4No1 / 1
84amnondominant soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 5 cm, united kingdom2017-03-07v4No1 / 1
84amnondominant soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 20 cm, united kingdom2017-03-07v4No1 / 4
28amnonhigh freq. in leaves in hawaii (dominant hawaii, organic material, forest biome, whole plant, leaf, forest ecosystem)2016-12-05v4No1 / 7
357amnondominant soil, topsoil, depth 0-10cm, subpolar coniferous forest biome, boreal forest, woodland area, forest ecosystem2018-08-19v4No1 / 8
84amnondominant soil, peatland, peat soil, sphagnum bog, temperate grassland biome, depth 5cm, wetland area2017-03-06v4No1 / 8
28amnondominant hawaii, feces, terrestrial biome, achatinella mustelina, environmental system determined by an organism2016-12-05v4No1 / 8
359amnondominant soil, topsoil, depth 0-10cm, guangdong province, subtropical broadleaf forest biome, china, forest ecosystem, woodland area2018-08-19v4No1 / 10
78amnondominant nanger granti, kenya, feces, tropical grassland biome, gazelle2017-03-01v4No1 / 10
195amnonhigh freq. in boston subway surfaces (dominant city, urban biome, train, boston)2017-09-07v4No1 / 11
199amnonhigh freq. on shower wall tile (dominant bathroom, shower, building, tile, urban biome, united states of america, building wall)2017-10-01v4No1 / 13
35amnondominant tanzania, dense settlement biome, hospital, breast milk, homo sapiens2016-12-06v4No1 / 13
80amnondominant feces, alouatta pigra, howler monkey, tropical broadleaf forest biome, central america, woodland area2017-03-03v4No1 / 14
84amnondominant soil, peatland, peat soil, sphagnum bog, temperate grassland biome, depth 20cm, wetland area2017-03-06v4No1 / 15
199amnonhigh freq. in kitchen sink (dominant building, urban biome, united states of america, kitchen, sink)2017-10-01v4No1 / 17
84amnonincreases in drought in late time points ( high in drought environment timepoint compared to control in soil temperate grassland biome fen peat soil flooded grassland biome depth 5 cm united kingdom )2017-03-07v4No1 / 18
128amnondominant belgium, ivy, hedera ibernica, leaf, city, dense settlement biome2017-04-14v4No1 / 18
35amnoncommon tanzania, dense settlement biome, hospital, breast milk, homo sapiens2016-12-06v4No1 / 25
84amnondisappears in drought in late time points ( high in control compared to drought environment timepoint in soil temperate grassland biome fen peat soil flooded grassland biome depth 5 cm united kingdom )2017-03-07v4No1 / 37
28amnoncommon in various trees in hawaii (common hawaii, organic material, forest biome, whole plant, leaf, forest ecosystem)2016-12-05v4No1 / 41
199amnonlower in bathroom shower compared to kitchen sink ( high in kitchen sink compared to bathroom shower tile building wall in building urban biome united states of america )2017-10-01v4No1 / 61
28amnoncommon hawaii, feces, terrestrial biome, achatinella mustelina, environmental system determined by an organism2016-12-05v4No1 / 71
199amnoncommon on shower wall tile (common bathroom, shower, building, tile, urban biome, united states of america, building wall)2017-10-01v4No1 / 90
199amnonhigher in bathroom shower compared to kitchen sink ( high in bathroom shower tile building wall compared to kitchen sink in building urban biome united states of america )2017-10-01v4No1 / 91
195amnoncommon in boston subway surfaces (common city, urban biome, train, boston)2017-09-07v4No1 / 116
100amnon high in ph ph<7, ph>6 compared to ph<6 ph>7 in soil urban biome park new york city central park 2017-04-03v4No1 / 126
199amnoncommon in kitchen sink (common building, urban biome, united states of america, kitchen, sink)2017-10-01v4No1 / 130
80amnon high in dry forest compared to tropical moist broadleaf forest biome in feces alouatta pigra howler monkey central america state of florida 2017-03-03v4No1 / 193
80amnoncommon feces, alouatta pigra, howler monkey, tropical broadleaf forest biome, central america, woodland area2017-03-03v4No1 / 198
80amnon high in tropical moist broadleaf forest biome compared to dry forest in feces central america alouatta palliata mantled howler monkey state of florida 2017-03-03v4No1 / 218
78amnoncommon nanger granti, kenya, feces, tropical grassland biome, gazelle2017-03-01v4No1 / 236
78amnonhigher in younger gazelles ( high in age young age compared to old age in nanger granti kenya feces tropical grassland biome gazelle )2017-03-01v4No1 / 270
78amnonhigher in older gazelles ( high in age old age compared to young age in nanger granti kenya feces tropical grassland biome gazelle )2017-03-01v4No1 / 273
128amnonhigher in ivy leaves from city compared to moor and forest ( high in city dense settlement biome compared to moor forest ecosystem in belgium ivy hedera ibernica leaf )2017-04-14v4No1 / 287
357amnon high in ph<3 compared to ph>3 in soil topsoil depth 0-10cm subpolar coniferous forest biome boreal forest woodland area forest ecosystem 2018-08-19v4No1 / 297
78amnon high in male compared to female in nanger granti kenya feces tropical grassland biome gazelle 2017-03-01v4No1 / 304
80amnon high in dry forest compared to tropical moist broadleaf forest biome in feces central america alouatta palliata mantled howler monkey state of florida 2017-03-03v4No1 / 314
128amnoncommon belgium, ivy, hedera ibernica, leaf, city, dense settlement biome2017-04-14v4No1 / 461
80amnon high in tropical moist broadleaf forest biome compared to dry forest in feces alouatta pigra howler monkey central america state of florida 2017-03-03v4No1 / 465
128amnonhigher in ivy leaves from moor and forest compared to city ( high in moor forest ecosystem compared to city dense settlement biome in belgium ivy hedera ibernica leaf )2017-04-14v4No1 / 525
357amnoncommon soil, topsoil, depth 0-10cm, subpolar coniferous forest biome, boreal forest, woodland area, forest ecosystem2018-08-19v4No1 / 538
357amnoncommon soil, topsoil, depth 0-10cm, mediterranean forest biome, forest ecosystem, woodland area2018-08-19v4No1 / 564
84amnoncommon soil, peatland, peat soil, sphagnum bog, temperate grassland biome, depth 20cm, wetland area2017-03-06v4No1 / 590
357amnoncommon in temperate deciduous forests around the world (common soil, topsoil, depth 0-10cm, temperate woodland biome, temperate deciduos forest, woodland area, forest ecosystem)2018-08-18v4No1 / 681
100amnoncommon soil, urban biome, park, new york city, central park2017-04-03v4No1 / 685
357amnon high in ph>3 compared to ph<3 in soil topsoil depth 0-10cm subpolar coniferous forest biome boreal forest woodland area forest ecosystem 2018-08-19v4No1 / 719
78amnon high in female compared to male in nanger granti kenya feces tropical grassland biome gazelle 2017-03-01v4No1 / 814
100amnon high in ph ph>7 compared to ph<7 in soil urban biome park new york city central park 2017-04-03v4No1 / 918
359amnoncommon soil, topsoil, depth 0-10cm, guangdong province, subtropical broadleaf forest biome, china, forest ecosystem, woodland area2018-08-19v4No1 / 935
84amnoncommon soil, peatland, peat soil, sphagnum bog, temperate grassland biome, depth 5cm, wetland area2017-03-06v4No1 / 1103
357amnon high in ph<5 compared to ph>5 in soil topsoil depth 0-10cm temperate woodland biome temperate deciduos forest woodland area forest ecosystem 2018-08-18v4No1 / 1104
357amnon high in ph>5 compared to ph<5 in soil topsoil depth 0-10cm temperate woodland biome temperate deciduos forest woodland area forest ecosystem 2018-08-18v4No1 / 1171
100amnon high in ph ph<5 compared to ph>5 in soil urban biome park new york city central park 2017-04-03v4No1 / 1451
84amnoncommon soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 20 cm, united kingdom2017-03-06v4No1 / 2866
84amnoncommon soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 5 cm, united kingdom2017-03-07v4No1 / 3434
100amnon high in ph ph<5.5 compared to ph>5.5 in soil urban biome park new york city central park 2017-04-03v4No1 / 4262
100amnon high in ph ph>6 compared to ph<6 in soil urban biome park new york city central park 2017-04-03v4No1 / 5365
100amnon high in ph ph<6 compared to ph>6 in soil urban biome park new york city central park 2017-04-03v4No1 / 5770

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