Summary for ontology term: tibet autonomous region

Number of annotations with term: 26

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Firmicutes;c__Clostridia;o__ClostridialesTGGGGAATATTGCACAATGGGCGGAAGCCTGATGCAGCAACGCCGCGTGAAGGATGAAGGTTTTCGGATCGTAAACTTCTGTCCCTGGGGAAGAAGAAAGTGACGGTACCCAAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.400000
d__Bacteria;p__Candidatus Saccharibacteria;g__Saccharibacteria_genera_incertae_sedisTAGGGAATCTTTCACAATGGGCGAAAGCCTGATGGAGCAACGCCGCGTGCAGGATGACGGCCTTCGGGTTGTAAACTGCTTTTATATCTGAGAAATATGATGGTAAGATATGAATAAGGACCGGCTAACTACGTGCCAGCAGCCGCGGTC0.363636
d__Bacteria;p__Firmicutes;c__Clostridia;o__ClostridialesTGGGGAATATTGGGCAATGGGGGAAACCCTGACCCAGCGACGCCGCGTGAGGGAAGAAGGTCTTCGGATTGTAAACCTCTGTCTTCGGGGACGATAGTGACTGTACCCGAGGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTA0.358974
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTAGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGTGATTGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGATAATGACGGTACCTGCATAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGT0.333333
d__BacteriaTAAGGAATCTTGCACAATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAACGATGAAGGCCTTAGGGTTGTAAAGTTCTGATCTGGGGGAAGAAGAAGTGACGGTACCCCAGGAGAAAGCCCCGGCTAAATACGTGCCAGCAGCCGCGG0.333333
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Coriobacteriales;f__CoriobacteriaceaeTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGATGAAGGCCCTCGGGTTGTAAACCGCTTTCAGCAGGGACGAGGCGCAAGTGACGGTACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCG0.311111
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Coriobacteriales;f__CoriobacteriaceaeTGGGGAATTTTGCGCAATGGGCGAAAGCCTGACGCAGCAACGCCGCGTGCGGGATGAAGGCCTTCGGGTCGTAAACCGCTTTCAGCAGGGACGATTGTGACGGTACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA0.303030
d__Bacteria;p__Firmicutes;c__Bacilli;o__BacillalesTAGGGAATCTTCCGCAATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGAAGGTTTTCGGATCGTAAAACTCTGTTGTTAGGGAAGAACAAGTAGCATAGTAACTGATGTTACCTTGACGGTACCTAACCAGAAAGCCACGGC0.303030
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCAACGCCGCGTGAGGGAAGAAGGTTTTCGGATTGTAAACCTCTGTCCTCAGGGACGAACACAATGACGGTACCTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.303030
d__Bacteria;p__"Bacteroidetes"TGAGGAATATTGGTCAATGGTCTGACGACTGAACCAGCCATGCCGCGTGAAGGTCACGGCCCTATGGGTCTTAAACTTCTTTTGCGAGGGAGCAATAAGGTCTACGTGTAGGCTGATGAGAGTACCTCGCGAATAAGCATCGGCTAACTC0.303030

Annotations:

common ontology terms
term enrichment score
TermScore
tibet autonomous region1.000000
riwoqe county0.631579
yak0.551724
bos grunniens0.484848
tibetan pig0.187500
tibetan swine0.187500
cecal content0.176471
tibetan plateau0.160000
jejunum0.148148
ruminal fluid0.148148
qinghai province0.129032
duodenum0.102564
LOWER IN jejunum0.100000
LOWER IN ruminal fluid0.100000
caecum0.084746
ileum0.081633
sus scrofa0.081081
pig0.081081
LOWER IN duodenum0.076923
LOWER IN gangcha region0.071429
gannan tibetan autonomous prefecture0.071429
LOWER IN tibetan pig0.071429
LOWER IN tibetan swine0.071429
gangcha region0.071429
LOWER IN gannan tibetan autonomous prefecture0.071429
colon0.067797
rumen0.067797
LOWER IN ileum0.064516
LOWER IN diarrhea0.057143
diarrhea0.057143
LOWER IN colon0.055556
LOWER IN rumen0.055556
farm0.048387
LOWER IN sus scrofa0.047619
LOWER IN pig0.047619
LOWER IN caecum0.036364
china0.021289
feces0.017070
adult0.010390
control0.009259
LOWER IN control0.009259
homo sapiens0.006768
LOWER IN feces0.005587
Fraction of dbbact annotations with this term covered by the query
TermScore
tibet autonomous region1.000000
riwoqe county1.000000
LOWER IN gangcha region0.500000
gannan tibetan autonomous prefecture0.500000
yak0.500000
LOWER IN tibetan pig0.500000
LOWER IN tibetan swine0.500000
tibetan pig0.500000
tibetan swine0.500000
gangcha region0.500000
LOWER IN gannan tibetan autonomous prefecture0.500000
bos grunniens0.400000
tibetan plateau0.166667
jejunum0.142857
LOWER IN jejunum0.142857
LOWER IN ruminal fluid0.142857
ruminal fluid0.142857
cecal content0.142857
qinghai province0.111111
LOWER IN diarrhea0.111111
diarrhea0.111111
duodenum0.076923
LOWER IN duodenum0.076923
sus scrofa0.062500
pig0.062500
LOWER IN sus scrofa0.062500
LOWER IN pig0.062500
LOWER IN ileum0.055556
ileum0.055556
caecum0.047619
LOWER IN colon0.043478
colon0.043478
LOWER IN rumen0.043478
rumen0.043478
farm0.027027
LOWER IN caecum0.023810
china0.010811
feces0.008696
adult0.005376
control0.005263
LOWER IN control0.005263
homo sapiens0.003460
LOWER IN feces0.002899
Fraction of annotations for the query sequences containing the term
TermScore
tibet autonomous region1.000000
china0.692308
yak0.615385
bos grunniens0.615385
feces0.461538
riwoqe county0.461538
caecum0.384615
cecal content0.230769
farm0.230769
homo sapiens0.153846
tibetan plateau0.153846
adult0.153846
jejunum0.153846
duodenum0.153846
ileum0.153846
colon0.153846
ruminal fluid0.153846
rumen0.153846
qinghai province0.153846
sus scrofa0.115385
pig0.115385
tibetan pig0.115385
tibetan swine0.115385
LOWER IN ileum0.076923
LOWER IN feces0.076923
LOWER IN colon0.076923
LOWER IN caecum0.076923
LOWER IN jejunum0.076923
LOWER IN duodenum0.076923
LOWER IN ruminal fluid0.076923
LOWER IN rumen0.076923
LOWER IN gangcha region0.038462
gannan tibetan autonomous prefecture0.038462
LOWER IN diarrhea0.038462
control0.038462
LOWER IN control0.038462
diarrhea0.038462
LOWER IN tibetan pig0.038462
LOWER IN tibetan swine0.038462
LOWER IN sus scrofa0.038462
LOWER IN pig0.038462
gangcha region0.038462
LOWER IN gannan tibetan autonomous prefecture0.038462
Exp. ID User ID Description Date Region Flag Sequences
931amnondominant riwoqe county, china, ruminal fluid, yak, tibet autonomous region, bos grunniens, rumen2022-08-25v3No1 / 4
931amnondominant riwoqe county, china, yak, tibet autonomous region, bos grunniens, ileum, colon, caecum, feces2022-08-25v3No1 / 6
914amnondominant yak, qinghai province, tibet autonomous region, bos grunniens, feces2022-06-26v3No1 / 12
931amnondominant riwoqe county, china, yak, tibet autonomous region, bos grunniens, jejunum, duodenum2022-08-25v3No1 / 13
380amnondominant tibet autonomous region, feces, homo sapiens, tibetan plateau, adult2018-10-03v4No1 / 15
314amnondominant caecum, cecal content, tibet autonomous region, farm, tibetan pig, tibetan swine, china2018-04-10v4No1 / 16
314amnondominant caecum, cecal content, tibet autonomous region, farm, sus scrofa, pig, china2018-04-10v4No1 / 23
380amnoncommon tibet autonomous region, feces, homo sapiens, tibetan plateau, adult2018-10-03v4No1 / 63
914amnon high in control compared to diarrhea in yak qinghai province tibet autonomous region bos grunniens feces 2022-06-26v3No1 / 71
914amnon high in diarrhea compared to control in yak qinghai province tibet autonomous region bos grunniens feces 2022-06-26v3No1 / 88
380amnon high in gangcha region compared to gannan tibetan autonomous prefecture in feces homo sapiens adult tibetan plateau tibet autonomous region 2018-10-03v4No1 / 114
380amnon high in gannan tibetan autonomous prefecture compared to gangcha region in tibet autonomous region feces homo sapiens tibetan plateau adult 2018-10-03v4No1 / 123
314amnon high in sus scrofa pig compared to tibetan pig tibetan swine in caecum cecal content tibet autonomous region farm china 2018-04-10v4No1 / 136
314amnon high in tibetan pig tibetan swine compared to sus scrofa pig in caecum cecal content tibet autonomous region farm china 2018-04-10v4No1 / 157
931amnoncommon jejunum, duodenum, riwoqe county, china, yak, tibet autonomous region, bos grunniens2022-08-25v3No1 / 270
314amnoncommon caecum, cecal content, tibet autonomous region, farm, sus scrofa, pig, china2018-04-10v4No1 / 402
314amnoncommon caecum, cecal content, tibet autonomous region, farm, tibetan pig, tibetan swine, china2018-04-10v4No1 / 467
914amnoncommon tibet autonomous region, qinghai province, bos grunniens, yak, feces2022-06-26v3No1 / 575
931amnoncommon ileum, colon, caecum, feces, riwoqe county, china, yak, tibet autonomous region, bos grunniens2022-08-25v3No1 / 587
931amnon high in jejunum duodenum compared to ruminal fluid rumen in riwoqe county china yak tibet autonomous region bos grunniens 2022-08-25v3No1 / 622
931amnoncommon ruminal fluid, rumen, riwoqe county, china, yak, tibet autonomous region, bos grunniens2022-08-25v3No1 / 626
931amnon high in jejunum duodenum compared to ileum feces colon caecum in tibet autonomous region riwoqe county china yak bos grunniens 2022-08-25v3No1 / 970
931amnon high in ileum feces colon caecum compared to ruminal fluid rumen in riwoqe county china yak tibet autonomous region bos grunniens 2022-08-25v3No1 / 1870
931amnon high in ileum feces colon caecum compared to jejunum duodenum in riwoqe county china yak tibet autonomous region bos grunniens 2022-08-25v3No1 / 2008
931amnon high in ruminal fluid rumen compared to jejunum duodenum in riwoqe county china yak tibet autonomous region bos grunniens 2022-08-25v3No1 / 2088
931amnon high in ruminal fluid rumen compared to ileum feces colon caecum in riwoqe county china yak tibet autonomous region bos grunniens 2022-08-25v3No1 / 2519

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