Summary for ontology term: topsoil

Number of annotations with term: 34

Annotations:

common ontology terms
term enrichment score
TermScore
topsoil0.896739
depth 0-10cm0.711111
forest0.603774
woodland0.416000
ph 5.40.190476
moist tropical forest0.190476
temperate woodland biome0.190476
temperate deciduos forest0.190476
subpolar coniferous forest biome0.190476
boreal forest0.190476
southern temperate forest0.190476
temperate broadleaf and mixed forest biome0.190476
hokkaido0.173913
soil0.144796
temperate coniferous forest biome0.105263
montane forest0.105263
mediterranean forest biome0.105263
savanna0.105263
guangdong province0.105263
subtropical broadleaf forest biome0.105263
japan0.102564
state of ohio0.100000
mangrove biome0.100000
mangrove swamp0.100000
ph 50.095238
LOWER IN snow0.055556
LOWER IN snow covered soil0.055556
non snow covered soil0.055556
snow covered soil0.055556
LOWER IN non snow covered soil0.055556
ph<4.50.055556
LOWER IN ph>4.50.055556
ph>4.50.055556
LOWER IN ph<4.50.055556
ph<30.055556
LOWER IN ph>30.055556
ph>30.055556
LOWER IN ph<30.055556
ph<40.055556
LOWER IN ph>40.055556
ph>40.055556
LOWER IN ph<40.055556
LOWER IN topsoil0.055556
10 cm depth0.055556
20 cm depth0.055556
LOWER IN 10 cm depth0.055556
LOWER IN 20 cm depth0.055556
ph>50.054054
snow0.052632
ph<50.052632
LOWER IN ph>50.052632
LOWER IN ph<50.052632
rhizosphere0.045455
LOWER IN winter0.042553
winter0.041667
summer0.040000
LOWER IN summer0.040000
china0.039216
united states of america0.010000
Fraction of dbbact annotations with this term covered by the query
TermScore
topsoil0.833333
depth 0-10cm0.571429
ph 5.40.500000
LOWER IN snow0.500000
LOWER IN snow covered soil0.500000
non snow covered soil0.500000
snow covered soil0.500000
LOWER IN non snow covered soil0.500000
moist tropical forest0.500000
ph<4.50.500000
LOWER IN ph>4.50.500000
ph>4.50.500000
LOWER IN ph<4.50.500000
temperate woodland biome0.500000
temperate deciduos forest0.500000
subpolar coniferous forest biome0.500000
boreal forest0.500000
ph<30.500000
LOWER IN ph>30.500000
ph>30.500000
LOWER IN ph<30.500000
southern temperate forest0.500000
temperate broadleaf and mixed forest biome0.500000
ph<40.500000
LOWER IN ph>40.500000
ph>40.500000
LOWER IN ph<40.500000
temperate coniferous forest biome0.500000
montane forest0.500000
mediterranean forest biome0.500000
savanna0.500000
guangdong province0.500000
subtropical broadleaf forest biome0.500000
LOWER IN topsoil0.500000
10 cm depth0.500000
20 cm depth0.500000
LOWER IN 10 cm depth0.500000
LOWER IN 20 cm depth0.500000
forest0.444444
hokkaido0.333333
ph>50.333333
state of ohio0.333333
mangrove biome0.333333
mangrove swamp0.333333
woodland0.285714
snow0.250000
ph<50.250000
LOWER IN ph>50.250000
LOWER IN ph<50.250000
ph 50.250000
japan0.090909
soil0.078431
LOWER IN winter0.076923
winter0.071429
summer0.062500
LOWER IN summer0.062500
rhizosphere0.037037
china0.023529
united states of america0.005464
Fraction of annotations for the query sequences containing the term
TermScore
topsoil0.970588
soil0.941176
depth 0-10cm0.941176
forest0.941176
woodland0.764706
japan0.117647
hokkaido0.117647
ph 5.40.117647
moist tropical forest0.117647
temperate woodland biome0.117647
temperate deciduos forest0.117647
subpolar coniferous forest biome0.117647
boreal forest0.117647
southern temperate forest0.117647
temperate broadleaf and mixed forest biome0.117647
china0.117647
temperate coniferous forest biome0.058824
montane forest0.058824
mediterranean forest biome0.058824
savanna0.058824
guangdong province0.058824
subtropical broadleaf forest biome0.058824
united states of america0.058824
state of ohio0.058824
ph 50.058824
mangrove biome0.058824
mangrove swamp0.058824
rhizosphere0.058824
LOWER IN snow0.029412
LOWER IN snow covered soil0.029412
non snow covered soil0.029412
summer0.029412
LOWER IN winter0.029412
snow0.029412
snow covered soil0.029412
winter0.029412
LOWER IN non snow covered soil0.029412
LOWER IN summer0.029412
ph<4.50.029412
LOWER IN ph>4.50.029412
ph>4.50.029412
LOWER IN ph<4.50.029412
ph<50.029412
LOWER IN ph>50.029412
ph>50.029412
LOWER IN ph<50.029412
ph<30.029412
LOWER IN ph>30.029412
ph>30.029412
LOWER IN ph<30.029412
ph<40.029412
LOWER IN ph>40.029412
ph>40.029412
LOWER IN ph<40.029412
LOWER IN topsoil0.029412
10 cm depth0.029412
20 cm depth0.029412
LOWER IN 10 cm depth0.029412
LOWER IN 20 cm depth0.029412
Exp. ID User ID Description Date Region Flag Sequences
357amnonhigh freq. in temperate deciduous forests around the world (highfreq soil, topsoil, depth 0-10cm, forest, woodland, temperate woodland biome, temperate deciduos forest)2018-08-18v4No1 / 1
357amnonhighfreq soil, topsoil, depth 0-10cm, forest, woodland, mediterranean forest biome2018-08-19v4No1 / 1
357amnonhighfreq soil, topsoil, depth 0-10cm, forest, woodland, temperate coniferous forest biome2018-08-19v4No1 / 2
357amnonhighfreq soil, topsoil, depth 0-10cm, forest, woodland, savanna2018-08-19v4No1 / 2
356amnonhigh freq. in deciduous broad leaved forest top soil in japan (highfreq soil, depth 0-10cm, japan, hokkaido, forest, topsoil, ph 5.4)2018-08-15v4No1 / 3
357amnonhighfreq soil, topsoil, depth 0-10cm, forest, woodland, southern temperate forest, temperate broadleaf and mixed forest biome2018-08-19v4No1 / 3
357amnonhigh freq. in moist tropical forest topsoil around the world (highfreq soil, topsoil, depth 0-10cm, forest, woodland, moist tropical forest)2018-08-18v4No1 / 4
357amnonhighfreq soil, topsoil, depth 0-10cm, forest, woodland, montane forest2018-08-19v4No1 / 5
357amnonhighfreq soil, topsoil, depth 0-10cm, forest, woodland, subpolar coniferous forest biome, boreal forest2018-08-19v4No1 / 8
359amnonhighfreq soil, china, topsoil, depth 0-10cm, guangdong province, subtropical broadleaf forest biome, forest, woodland2018-08-19v4No1 / 10
316amnonhighfreq united states of america, forest, soil, topsoil, state of ohio, depth 0-10cm, ph 52018-04-10v4No1 / 11
34amnonhigher in 10cm, 20cm depth compared to 0cm ( high in 10 cm depth 20 cm depth compared to topsoil in mangrove biome mangrove swamp rhizosphere china )2016-12-06v4No1 / 75
356amnonlower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth 0-10cm japan hokkaido forest topsoil ph 5.4 )2018-08-15v4No1 / 78
34amnonhigher in 0cm depth compared to 10cm, 20cm depth ( high in topsoil compared to 10 cm depth 20 cm depth in mangrove biome mangrove swamp rhizosphere china )2016-12-06v4No1 / 106
356amnonhigher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth 0-10cm japan hokkaido forest topsoil ph 5.4 )2018-08-15v4No1 / 113
357amnoncommon in moist tropical forest topsoil around the world (common soil, topsoil, depth 0-10cm, forest, woodland, moist tropical forest)2018-08-18v4No1 / 171
316amnoncommon united states of america, forest, soil, topsoil, state of ohio, depth 0-10cm, ph 52018-04-10v4No1 / 199
357amnon high in ph<4 compared to ph>4 in soil topsoil depth 0-10cm forest woodland southern temperate forest temperate broadleaf and mixed forest biome 2018-08-19v4No1 / 282
357amnon high in ph<3 compared to ph>3 in soil topsoil depth 0-10cm forest woodland subpolar coniferous forest biome boreal forest 2018-08-19v4No1 / 297
357amnoncommon soil, topsoil, depth 0-10cm, forest, woodland, temperate coniferous forest biome2018-08-19v4No1 / 474
357amnoncommon soil, topsoil, depth 0-10cm, forest, woodland, southern temperate forest, temperate broadleaf and mixed forest biome2018-08-19v4No1 / 499
357amnoncommon soil, topsoil, depth 0-10cm, forest, woodland, subpolar coniferous forest biome, boreal forest2018-08-19v4No1 / 538
357amnoncommon soil, topsoil, depth 0-10cm, forest, woodland, mediterranean forest biome2018-08-19v4No1 / 564
357amnoncommon soil, topsoil, depth 0-10cm, forest, woodland, montane forest2018-08-19v4No1 / 592
357amnoncommon soil, topsoil, depth 0-10cm, forest, woodland, savanna2018-08-19v4No1 / 614
357amnoncommon in temperate deciduous forests around the world (common soil, topsoil, depth 0-10cm, forest, woodland, temperate woodland biome, temperate deciduos forest)2018-08-18v4No1 / 681
357amnon high in ph>3 compared to ph<3 in soil topsoil depth 0-10cm forest woodland subpolar coniferous forest biome boreal forest 2018-08-19v4No1 / 719
357amnon high in ph>4 compared to ph<4 in soil topsoil depth 0-10cm forest woodland southern temperate forest temperate broadleaf and mixed forest biome 2018-08-19v4No1 / 761
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth 0-10cm, japan, hokkaido, forest, topsoil, ph 5.4)2018-08-15v4No1 / 834
357amnon high in ph<4.5 compared to ph>4.5 in soil topsoil depth 0-10cm forest woodland moist tropical forest 2018-08-18v4No1 / 915
359amnoncommon soil, china, topsoil, depth 0-10cm, guangdong province, subtropical broadleaf forest biome, forest, woodland2018-08-19v4No1 / 935
357amnon high in ph<5 compared to ph>5 in soil topsoil depth 0-10cm forest woodland temperate woodland biome temperate deciduos forest 2018-08-18v4No1 / 1104
357amnon high in ph>5 compared to ph<5 in soil topsoil depth 0-10cm forest woodland temperate woodland biome temperate deciduos forest 2018-08-18v4No1 / 1171
357amnon high in ph>4.5 compared to ph<4.5 in soil topsoil depth 0-10cm forest woodland moist tropical forest 2018-08-18v4No1 / 2773

Problems / suggestions? Please email info AT dbbact DOT org