Summary for ontology term: topsoil

Number of annotations with term: 61

Annotations:

common ontology terms
term enrichment score
TermScore
topsoil0.933852
forest ecosystem0.481203
depth 0-10cm0.387879
woodland area0.342105
long island sound0.265060
lushan mountain0.246914
state of connecticut0.234043
saline marsh0.234043
forested area0.219780
estuary0.209524
depth 0-20cm0.203822
jiangxi province0.198020
depth 0-5cm0.189655
ph 4.50.151899
sugarcane0.151899
saccharum0.151899
guangzhou city prefecture0.131868
soil0.120452
ph 5.40.115942
moist tropical forest0.115942
temperate woodland biome0.115942
temperate deciduos forest0.115942
subpolar coniferous forest biome0.115942
boreal forest0.115942
southern temperate forest0.115942
temperate broadleaf and mixed forest biome0.115942
coniferous forest biome0.115942
common reed0.115942
phragmites australis0.115942
sporobolus alterniflorus0.115942
smooth cordgrass0.115942
hokkaido0.109589
spartina alterniflora0.103896
saltmeadow cordgrass0.089552
sporobolus pumilus0.089552
ph 6.70.085714
non-fertilized soil0.085714
fertilized soil0.085714
ph 5.5-60.085714
rhizosphere0.074928
japan0.066116
montane forest0.061538
mediterranean forest biome0.061538
savanna0.061538
subtropical broadleaf forest biome0.061538
elevation 200-300m0.061538
elevation 500-600m0.061538
elevation 800-900m0.061538
elevation 1000-1100m0.061538
elevation 1300-1400m0.061538
LOWER IN saltmeadow cordgrass0.061538
LOWER IN sporobolus pumilus0.061538
LOWER IN smooth cordgrass0.061538
LOWER IN sporobolus alterniflorus0.061538
LOWER IN spartina alterniflora0.061538
LOWER IN common reed0.061538
LOWER IN phragmites australis0.061538
guangdong province0.059701
state of ohio0.059701
ph 4-4.50.057971
ph 40.057971
mangrove swamp0.057971
ph 50.056338
china0.047847
LOWER IN snow0.031746
LOWER IN snow covered soil0.031746
non snow covered soil0.031746
snow covered soil0.031746
LOWER IN non snow covered soil0.031746
ph<4.50.031746
LOWER IN ph&gt;4.50.031746
ph>4.50.031746
LOWER IN ph&lt;4.50.031746
ph<30.031746
LOWER IN ph&gt;30.031746
ph>30.031746
LOWER IN ph&lt;30.031746
ph<40.031746
LOWER IN ph&gt;40.031746
ph>40.031746
LOWER IN ph&lt;40.031746
LOWER IN topsoil0.031746
20 cm depth0.031746
LOWER IN 10 cm depth0.031746
LOWER IN 20 cm depth0.031746
LOWER IN ph 5.5-60.031746
LOWER IN ph 6.70.031746
ph>50.031250
10 cm depth0.031250
LOWER IN fertilized soil0.031250
LOWER IN non-fertilized soil0.031250
snow0.030769
ph<50.030769
LOWER IN ph&gt;50.030769
LOWER IN ph&lt;50.030769
LOWER IN winter0.026316
winter0.025641
summer0.024096
LOWER IN summer0.024096
united states of america0.015975
Fraction of dbbact annotations with this term covered by the query
TermScore
topsoil0.888889
ph 5.40.500000
LOWER IN snow0.500000
LOWER IN snow covered soil0.500000
non snow covered soil0.500000
snow covered soil0.500000
LOWER IN non snow covered soil0.500000
moist tropical forest0.500000
ph<4.50.500000
LOWER IN ph&gt;4.50.500000
ph>4.50.500000
LOWER IN ph&lt;4.50.500000
temperate woodland biome0.500000
temperate deciduos forest0.500000
subpolar coniferous forest biome0.500000
boreal forest0.500000
ph<30.500000
LOWER IN ph&gt;30.500000
ph>30.500000
LOWER IN ph&lt;30.500000
southern temperate forest0.500000
temperate broadleaf and mixed forest biome0.500000
ph<40.500000
LOWER IN ph&gt;40.500000
ph>40.500000
LOWER IN ph&lt;40.500000
montane forest0.500000
mediterranean forest biome0.500000
savanna0.500000
subtropical broadleaf forest biome0.500000
lushan mountain0.500000
elevation 200-300m0.500000
elevation 500-600m0.500000
elevation 800-900m0.500000
coniferous forest biome0.500000
elevation 1000-1100m0.500000
elevation 1300-1400m0.500000
common reed0.500000
phragmites australis0.500000
long island sound0.500000
saltmeadow cordgrass0.500000
sporobolus pumilus0.500000
sporobolus alterniflorus0.500000
smooth cordgrass0.500000
LOWER IN saltmeadow cordgrass0.500000
LOWER IN sporobolus pumilus0.500000
LOWER IN smooth cordgrass0.500000
LOWER IN sporobolus alterniflorus0.500000
LOWER IN spartina alterniflora0.500000
LOWER IN common reed0.500000
LOWER IN phragmites australis0.500000
LOWER IN topsoil0.500000
20 cm depth0.500000
LOWER IN 10 cm depth0.500000
LOWER IN 20 cm depth0.500000
LOWER IN ph 5.5-60.500000
LOWER IN ph 6.70.500000
forest ecosystem0.444444
hokkaido0.333333
ph>50.333333
guangdong province0.333333
forested area0.333333
ph 4.50.333333
state of connecticut0.333333
saline marsh0.333333
state of ohio0.333333
10 cm depth0.333333
ph 6.70.333333
sugarcane0.333333
saccharum0.333333
non-fertilized soil0.333333
fertilized soil0.333333
ph 5.5-60.333333
LOWER IN fertilized soil0.333333
LOWER IN non-fertilized soil0.333333
depth 0-10cm0.307692
woodland area0.285714
snow0.250000
ph<50.250000
LOWER IN ph&gt;50.250000
LOWER IN ph&lt;50.250000
jiangxi province0.250000
ph 4-4.50.250000
ph 40.250000
estuary0.250000
spartina alterniflora0.250000
mangrove swamp0.250000
depth 0-5cm0.200000
ph 50.200000
guangzhou city prefecture0.200000
depth 0-20cm0.166667
japan0.066667
LOWER IN winter0.066667
soil0.065217
winter0.058824
summer0.045455
LOWER IN summer0.045455
rhizosphere0.045455
china0.025806
united states of america0.008299
Fraction of annotations for the query sequences containing the term
TermScore
topsoil0.983607
soil0.786885
depth 0-10cm0.524590
forest ecosystem0.524590
woodland area0.426230
china0.327869
depth 0-20cm0.262295
rhizosphere0.213115
united states of america0.213115
long island sound0.180328
state of connecticut0.180328
depth 0-5cm0.180328
estuary0.180328
saline marsh0.180328
jiangxi province0.163934
lushan mountain0.163934
forested area0.163934
ph 4.50.098361
sugarcane0.098361
saccharum0.098361
guangzhou city prefecture0.098361
hokkaido0.065574
ph 5.40.065574
japan0.065574
moist tropical forest0.065574
temperate woodland biome0.065574
temperate deciduos forest0.065574
subpolar coniferous forest biome0.065574
boreal forest0.065574
southern temperate forest0.065574
temperate broadleaf and mixed forest biome0.065574
coniferous forest biome0.065574
common reed0.065574
phragmites australis0.065574
sporobolus alterniflorus0.065574
smooth cordgrass0.065574
spartina alterniflora0.065574
saltmeadow cordgrass0.049180
sporobolus pumilus0.049180
ph 6.70.049180
non-fertilized soil0.049180
fertilized soil0.049180
ph 5.5-60.049180
montane forest0.032787
mediterranean forest biome0.032787
savanna0.032787
guangdong province0.032787
subtropical broadleaf forest biome0.032787
elevation 200-300m0.032787
elevation 500-600m0.032787
elevation 800-900m0.032787
ph 4-4.50.032787
elevation 1000-1100m0.032787
ph 40.032787
elevation 1300-1400m0.032787
LOWER IN saltmeadow cordgrass0.032787
LOWER IN sporobolus pumilus0.032787
LOWER IN smooth cordgrass0.032787
LOWER IN sporobolus alterniflorus0.032787
LOWER IN spartina alterniflora0.032787
LOWER IN common reed0.032787
LOWER IN phragmites australis0.032787
state of ohio0.032787
ph 50.032787
mangrove swamp0.032787
LOWER IN snow0.016393
LOWER IN snow covered soil0.016393
non snow covered soil0.016393
summer0.016393
LOWER IN winter0.016393
snow0.016393
snow covered soil0.016393
winter0.016393
LOWER IN non snow covered soil0.016393
LOWER IN summer0.016393
ph<4.50.016393
LOWER IN ph&gt;4.50.016393
ph>4.50.016393
LOWER IN ph&lt;4.50.016393
ph<50.016393
LOWER IN ph&gt;50.016393
ph>50.016393
LOWER IN ph&lt;50.016393
ph<30.016393
LOWER IN ph&gt;30.016393
ph>30.016393
LOWER IN ph&lt;30.016393
ph<40.016393
LOWER IN ph&gt;40.016393
ph>40.016393
LOWER IN ph&lt;40.016393
LOWER IN topsoil0.016393
10 cm depth0.016393
20 cm depth0.016393
LOWER IN 10 cm depth0.016393
LOWER IN 20 cm depth0.016393
LOWER IN ph 5.5-60.016393
LOWER IN fertilized soil0.016393
LOWER IN ph 6.70.016393
LOWER IN non-fertilized soil0.016393
Exp. ID User ID Description Date Region Flag Sequences
357amnonhigh freq. in temperate deciduous forests around the world (dominant soil, topsoil, depth 0-10cm, temperate woodland biome, temperate deciduos forest, woodland area, forest ecosystem)2018-08-18v4No1 / 1
357amnondominant soil, topsoil, depth 0-10cm, mediterranean forest biome, forest ecosystem, woodland area2018-08-19v4No1 / 1
784amnondominant common reed, phragmites australis, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 1
357amnondominant soil, topsoil, depth 0-10cm, woodland area, forest ecosystem2018-08-19v4No1 / 2
357amnondominant soil, topsoil, depth 0-10cm, savanna, forest ecosystem, woodland area2018-08-19v4No1 / 2
616amnondominant in topsoil of PK/NP/NPK/NK fertilized sugarcane field (dominant fertilized soil, ph 5.5-6, sugarcane, saccharum, soil, topsoil, depth 0-20cm, china, guangzhou city prefecture)2020-04-27v3No1 / 2
356amnonhigh freq. in deciduous broad leaved forest top soil in japan (dominant soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 3
357amnondominant soil, topsoil, depth 0-10cm, southern temperate forest, temperate broadleaf and mixed forest biome, woodland area, forest ecosystem2018-08-19v4No1 / 3
784amnondominant sporobolus alterniflorus, smooth cordgrass, spartina alterniflora, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 3
357amnonhigh freq. in moist tropical forest topsoil around the world (dominant soil, topsoil, depth 0-10cm, moist tropical forest, woodland area, forest ecosystem)2018-08-18v4No1 / 4
357amnondominant soil, topsoil, depth 0-10cm, montane forest, forest ecosystem, woodland area2018-08-19v4No1 / 5
616amnondominant in topsoil of non-fertilized sugarcane field (dominant ph 6.7, sugarcane, saccharum, soil, topsoil, depth 0-20cm, china, guangzhou city prefecture, non-fertilized soil)2020-04-27v3No1 / 6
667amnondominant jiangxi province, lushan mountain, china, forested area, ph 4.5, elevation 200-300m, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 7
357amnondominant soil, topsoil, depth 0-10cm, subpolar coniferous forest biome, boreal forest, woodland area, forest ecosystem2018-08-19v4No1 / 8
667amnondominant elevation 800-900m, ph 4.5, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 8
667amnondominant ph 4, elevation 1300-1400m, coniferous forest biome, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 8
359amnondominant soil, topsoil, depth 0-10cm, guangdong province, subtropical broadleaf forest biome, china, forest ecosystem, woodland area2018-08-19v4No1 / 10
316amnondominant united states of america, soil, topsoil, state of ohio, depth 0-10cm, ph 5, forest ecosystem2018-04-10v4No1 / 11
667amnondominant ph 4.5, elevation 500-600m, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 12
667amnondominant coniferous forest biome, ph 4-4.5, elevation 1000-1100m, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 13
34amnonhigher in 10cm, 20cm depth compared to 0cm ( high in 10 cm depth 20 cm depth compared to topsoil in mangrove swamp rhizosphere china )2016-12-06v4No1 / 75
356amnonlower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 78
34amnonhigher in 0cm depth compared to 10cm, 20cm depth ( high in topsoil compared to 10 cm depth 20 cm depth in mangrove swamp rhizosphere china )2016-12-06v4No1 / 106
356amnonhigher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 113
357amnoncommon in moist tropical forest topsoil around the world (common soil, topsoil, depth 0-10cm, moist tropical forest, woodland area, forest ecosystem)2018-08-18v4No1 / 171
316amnoncommon united states of america, soil, topsoil, state of ohio, depth 0-10cm, ph 5, forest ecosystem2018-04-10v4No1 / 199
784amnoncommon common reed, phragmites australis, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 204
784amnon high in common reed phragmites australis compared to saltmeadow cordgrass sporobolus pumilus in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 267
784amnon high in saltmeadow cordgrass sporobolus pumilus compared to smooth cordgrass sporobolus alterniflorus spartina alterniflora in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 277
357amnon high in ph<4 compared to ph>4 in soil topsoil depth 0-10cm southern temperate forest temperate broadleaf and mixed forest biome woodland area forest ecosystem 2018-08-19v4No1 / 282
357amnon high in ph<3 compared to ph>3 in soil topsoil depth 0-10cm subpolar coniferous forest biome boreal forest woodland area forest ecosystem 2018-08-19v4No1 / 297
784amnon high in smooth cordgrass spartina alterniflora sporobolus alterniflorus compared to saltmeadow cordgrass sporobolus pumilus in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 380
784amnoncommon saltmeadow cordgrass, sporobolus pumilus, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 382
357amnoncommon soil, topsoil, depth 0-10cm, woodland area, forest ecosystem2018-08-19v4No1 / 474
357amnoncommon soil, topsoil, depth 0-10cm, southern temperate forest, temperate broadleaf and mixed forest biome, woodland area, forest ecosystem2018-08-19v4No1 / 499
616amnon high in ph 6.7 non-fertilized soil compared to ph 5.5-6 fertilized soil in sugarcane saccharum soil topsoil depth 0-20cm china guangzhou city prefecture 2020-04-27v3No1 / 504
784amnoncommon sporobolus alterniflorus, smooth cordgrass, spartina alterniflora, rhizosphere, long island sound, state of connecticut, depth 0-5cm, topsoil, united states of america, estuary, saline marsh2021-05-16v4No1 / 511
357amnoncommon soil, topsoil, depth 0-10cm, subpolar coniferous forest biome, boreal forest, woodland area, forest ecosystem2018-08-19v4No1 / 538
357amnoncommon soil, topsoil, depth 0-10cm, mediterranean forest biome, forest ecosystem, woodland area2018-08-19v4No1 / 564
667amnoncommon ph 4.5, elevation 500-600m, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 575
784amnon high in saltmeadow cordgrass sporobolus pumilus compared to common reed phragmites australis in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 581
357amnoncommon soil, topsoil, depth 0-10cm, montane forest, woodland area, forest ecosystem2018-08-19v4No1 / 592
667amnoncommon jiangxi province, lushan mountain, china, forested area, ph 4.5, elevation 200-300m, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 613
357amnoncommon soil, topsoil, depth 0-10cm, savanna, forest ecosystem, woodland area2018-08-19v4No1 / 614
667amnoncommon coniferous forest biome, ph 4-4.5, elevation 1000-1100m, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 630
616amnon high in ph 5.5-6 fertilized soil compared to ph 6.7 non-fertilized soil in sugarcane saccharum soil topsoil depth 0-20cm china guangzhou city prefecture 2020-04-27v3No1 / 648
357amnoncommon in temperate deciduous forests around the world (common soil, topsoil, depth 0-10cm, temperate woodland biome, temperate deciduos forest, woodland area, forest ecosystem)2018-08-18v4No1 / 681
667amnoncommon elevation 800-900m, ph 4.5, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 694
357amnon high in ph>3 compared to ph<3 in soil topsoil depth 0-10cm subpolar coniferous forest biome boreal forest woodland area forest ecosystem 2018-08-19v4No1 / 719
357amnon high in ph>4 compared to ph<4 in soil topsoil depth 0-10cm southern temperate forest temperate broadleaf and mixed forest biome woodland area forest ecosystem 2018-08-19v4No1 / 761
667amnoncommon ph 4, elevation 1300-1400m, coniferous forest biome, jiangxi province, lushan mountain, china, forested area, depth 0-20cm, topsoil, soil2020-09-25v4No1 / 777
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 834
357amnon high in ph<4.5 compared to ph>4.5 in soil topsoil depth 0-10cm moist tropical forest woodland area forest ecosystem 2018-08-18v4No1 / 915
784amnon high in common reed phragmites australis compared to smooth cordgrass spartina alterniflora sporobolus alterniflorus in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 918
359amnoncommon soil, topsoil, depth 0-10cm, guangdong province, subtropical broadleaf forest biome, china, forest ecosystem, woodland area2018-08-19v4No1 / 935
357amnon high in ph<5 compared to ph>5 in soil topsoil depth 0-10cm temperate woodland biome temperate deciduos forest woodland area forest ecosystem 2018-08-18v4No1 / 1104
357amnon high in ph>5 compared to ph<5 in soil topsoil depth 0-10cm temperate woodland biome temperate deciduos forest woodland area forest ecosystem 2018-08-18v4No1 / 1171
616amnoncommon in topsoil of non-fertilized sugarcane field (common ph 6.7, sugarcane, saccharum, soil, topsoil, depth 0-20cm, china, guangzhou city prefecture, non-fertilized soil)2020-04-27v3No1 / 1277
784amnon high in smooth cordgrass sporobolus alterniflorus spartina alterniflora compared to common reed phragmites australis in rhizosphere long island sound state of connecticut depth 0-5cm topsoil united states of america estuary saline marsh 2021-05-16v4No1 / 1421
616amnoncommon in topsoil of PK/NP/NPK/NK fertilized sugarcane field (common fertilized soil, ph 5.5-6, sugarcane, saccharum, soil, topsoil, depth 0-20cm, china, guangzhou city prefecture)2020-04-27v3No1 / 1710
357amnon high in ph>4.5 compared to ph<4.5 in soil topsoil depth 0-10cm moist tropical forest woodland area forest ecosystem 2018-08-18v4No1 / 2773

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