Summary for ontology term: united kingdom

Number of annotations with term: 104

Annotations:

common ontology terms
term enrichment score
TermScore
united kingdom0.678067
scotland0.224000
perth0.212121
age 1-3 years0.191781
cambridgeshire0.187500
recurrent otitis media0.174603
newt0.171429
chicken0.157895
gallus gallus0.157895
horse0.149254
equus caballus0.143885
caecum0.133333
drinking water0.114943
sus scrofa0.108374
pig0.108374
lissotriton vulgaris0.103448
triturus cristatus0.103448
temperate grassland biome0.103448
flooded grassland biome0.103448
england0.103448
child0.102916
middle ear0.098361
fen0.098361
peat soil0.093750
digestive system0.081967
farm0.080321
ileum0.077519
australia0.075676
nasopharynx0.073171
glasgow0.071429
age 42 days0.071429
liverpool0.071429
great britain0.071429
edinburgh0.071429
drosophila melanogaster0.071429
fruit fly0.071429
depth 5 cm0.071429
fish0.063830
research facility0.060698
equine grass sickness0.054545
middle ear fluid0.054545
middle ear rinse0.054545
pond0.054545
saline water aquarium0.054545
scylla paramamosain0.054545
mud crab0.054545
cyprinus carpio0.054545
common carp0.054545
wild type genotype0.054545
skin0.053097
fish farm0.053097
diet0.052632
intestine0.052174
left colon0.051724
jejunum0.051724
oncorhynchus mykiss0.051724
rainbow trout0.051724
control0.051020
right colon0.050420
LOWER IN caecum0.049180
disease0.049180
saline water0.045802
duodenum0.044776
dentition0.044444
LOWER IN control0.043541
feces0.038230
caudal teeth0.037037
LOWER IN rostral teeth0.037037
LOWER IN campylobacter0.037037
age 15 - 35 days0.037037
campylobacter0.037037
calvert island0.037037
alga0.037037
ulva lactuca0.037037
ulva0.037037
depth 20 cm0.037037
spring0.037037
polga mutant0.037037
canada0.036364
province of british columbia0.036364
site c0.036364
site b0.036364
site d0.036364
site e0.036364
site a0.036364
external acoustic meatus0.035714
ear canal0.035714
LOWER IN jejunum0.035714
LOWER IN left colon0.035714
LOWER IN research facility0.035088
LOWER IN ileum0.035088
LOWER IN right colon0.035088
gastrointestinal system0.034483
body mass index0.033898
LOWER IN duodenum0.032787
adult0.032293
LOWER IN wild0.032258
water0.031546
ocean0.029412
mouse0.028846
Fraction of dbbact annotations with this term covered by the query
TermScore
united kingdom0.888889
scotland0.666667
glasgow0.500000
lissotriton vulgaris0.500000
cambridgeshire0.500000
triturus cristatus0.500000
caecum0.500000
age 42 days0.500000
liverpool0.500000
great britain0.500000
LOWER IN equine grass sickness0.500000
equine grass sickness0.500000
edinburgh0.500000
caudal teeth0.500000
LOWER IN rostral teeth0.500000
drosophila melanogaster0.500000
fruit fly0.500000
cmy diet0.500000
LOWER IN campylobacter0.500000
age 15 - 35 days0.500000
campylobacter0.500000
LOWER IN cmy diet0.500000
calvert island0.500000
alga0.500000
ulva lactuca0.500000
ulva0.500000
perth0.500000
recurrent otitis media0.500000
LOWER IN recurrent otitis media0.500000
middle ear fluid0.500000
middle ear rinse0.500000
LOWER IN middle ear rinse0.500000
LOWER IN middle ear fluid0.500000
intestinal contents0.500000
LOWER IN intestinal contents0.500000
LOWER IN sucram0.500000
standard feed0.500000
sucram0.500000
LOWER IN standard feed0.500000
pond0.500000
saline water aquarium0.500000
scylla paramamosain0.500000
mud crab0.500000
temperate grassland biome0.500000
flooded grassland biome0.500000
depth 20 cm0.500000
spring0.500000
depth 5 cm0.500000
LOWER IN timepoint0.500000
cyprinus carpio0.500000
common carp0.500000
england0.500000
LOWER IN common carp0.500000
LOWER IN cyprinus carpio0.500000
LOWER IN rainbow trout0.500000
LOWER IN oncorhynchus mykiss0.500000
polga mutatnt0.500000
LOWER IN wild type genotype0.500000
wild type genotype0.500000
LOWER IN polga mutant0.500000
polga mutant0.500000
LOWER IN obsolete_juvenile stage0.333333
newt0.333333
horse0.333333
LOWER IN starch diet0.333333
starch diet0.333333
canada0.333333
province of british columbia0.333333
site c0.333333
site b0.333333
site d0.333333
site e0.333333
age 1-3 years0.333333
middle ear0.333333
LOWER IN mucosa0.333333
fish farm0.333333
fen0.333333
LOWER IN drought environment0.333333
drought environment0.333333
timepoint0.333333
site a0.333333
equus caballus0.285714
chicken0.250000
gallus gallus0.250000
LOWER IN disease0.250000
external acoustic meatus0.250000
ear canal0.250000
mucosa0.250000
LOWER IN jejunum0.250000
LOWER IN left colon0.250000
left colon0.250000
jejunum0.250000
peat soil0.250000
oncorhynchus mykiss0.250000
rainbow trout0.250000
LOWER IN research facility0.200000
LOWER IN ileum0.200000
ileum0.200000
LOWER IN right colon0.200000
right colon0.200000
Fraction of annotations for the query sequences containing the term
TermScore
united kingdom0.548077
feces0.269231
research facility0.192308
child0.144231
adult0.144231
scotland0.134615
australia0.134615
age 1-3 years0.134615
perth0.134615
newt0.115385
skin0.115385
cambridgeshire0.115385
chicken0.115385
gallus gallus0.115385
recurrent otitis media0.105769
sus scrofa0.105769
pig0.105769
control0.096154
equus caballus0.096154
horse0.096154
farm0.096154
digestive system0.096154
water0.096154
drinking water0.096154
homo sapiens0.076923
caecum0.076923
LOWER IN control0.057692
lissotriton vulgaris0.057692
triturus cristatus0.057692
nasopharynx0.057692
middle ear0.057692
soil0.057692
temperate grassland biome0.057692
fen0.057692
peat soil0.057692
flooded grassland biome0.057692
fish0.057692
england0.057692
intestine0.057692
mouse0.057692
mus musculus0.057692
ileum0.048077
glasgow0.038462
age 42 days0.038462
liverpool0.038462
great britain0.038462
dentition0.038462
edinburgh0.038462
drosophila melanogaster0.038462
fruit fly0.038462
diet0.038462
depth 5 cm0.038462
LOWER IN caecum0.028846
equine grass sickness0.028846
disease0.028846
middle ear fluid0.028846
middle ear rinse0.028846
right colon0.028846
left colon0.028846
duodenum0.028846
jejunum0.028846
china0.028846
pond0.028846
saline water0.028846
saline water aquarium0.028846
fish farm0.028846
scylla paramamosain0.028846
mud crab0.028846
cyprinus carpio0.028846
common carp0.028846
oncorhynchus mykiss0.028846
rainbow trout0.028846
wild type genotype0.028846
LOWER IN wild0.019231
wild0.019231
LOWER IN research facility0.019231
LOWER IN ileum0.019231
caudal teeth0.019231
LOWER IN rostral teeth0.019231
LOWER IN campylobacter0.019231
age 15 - 35 days0.019231
campylobacter0.019231
canada0.019231
province of british columbia0.019231
calvert island0.019231
pacific ocean0.019231
ocean0.019231
alga0.019231
ulva lactuca0.019231
ulva0.019231
site c0.019231
site b0.019231
site d0.019231
site e0.019231
external acoustic meatus0.019231
ear canal0.019231
LOWER IN duodenum0.019231
LOWER IN jejunum0.019231
LOWER IN right colon0.019231
LOWER IN left colon0.019231
Exp. ID User ID Description Date Region Flag Sequences
599amnon high in caudal teeth compared to rostral teeth in equus caballus horse dentition edinburgh scotland farm 2020-03-25v4No1 / 0
244amnon high in cmy diet diet compared to starch diet in drosophila melanogaster fruit fly research facility digestive system united kingdom 2017-11-15v4No1 / 0
244amnon high in diet starch diet compared to cmy diet in drosophila melanogaster fruit fly research facility digestive system united kingdom 2017-11-15v4No1 / 0
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 0
84amnondominant soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 5 cm, united kingdom2017-03-07v4No1 / 0
379amnonhigher in chickens infeceted with campylobacter at age 20 days compared to noninfected controls ( high in campylobacter compared to control in feces gallus gallus chicken united kingdom )2018-09-14v4No1 / 1
110amnondominant water, drinking water, scotland, site c2017-04-08v4No1 / 1
110amnondominant water, drinking water, scotland, site b2017-04-08v4No1 / 1
84amnondominant soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 20 cm, united kingdom2017-03-07v4No1 / 3
110amnondominant water, drinking water, scotland, site a2017-04-08v4No1 / 3
448amnonhigh freq. in healthy horse feces (dominant equus caballus, horse, feces, farm, control, united kingdom)2019-01-08v4No1 / 4
110amnondominant water, drinking water, scotland, site d2017-04-08v4No1 / 5
110amnondominant water, drinking water, scotland, site e2017-04-08v4No1 / 5
605amnoncommon australia, nasopharynx, child, age 1-3 years, perth, control2020-04-07v3No1 / 5
605amnoncommon australia, child, age 1-3 years, perth, recurrent otitis media, middle ear, middle ear rinse2020-04-07v3No1 / 5
605amnoncommon australia, child, age 1-3 years, perth, recurrent otitis media, external acoustic meatus, ear canal2020-04-07v3No1 / 6
599amnon high in caudal teeth compared to rostral teeth in equus caballus horse dentition edinburgh scotland farm 2020-03-25v4No1 / 7
244amnondominant drosophila melanogaster, fruit fly, research facility, digestive system, united kingdom2017-11-15v4No1 / 8
605amnoncommon australia, child, age 1-3 years, perth, recurrent otitis media, middle ear, middle ear fluid2020-04-07v3No1 / 8
353amnonhigh freq. in wild Lissotriton vulgaris newts skin (dominant newt, adult, skin, lissotriton vulgaris, cambridgeshire, united kingdom)2018-07-30v4No1 / 9
353amnonhigh freq. in wild Triturus cristatus newts skin (dominant newt, adult, skin, cambridgeshire, triturus cristatus, united kingdom)2018-07-30v4No1 / 9
605amnondominant australia, nasopharynx, child, age 1-3 years, perth, control2020-04-07v3No1 / 9
256amnondominant sus scrofa, pig, duodenum, jejunum, ileum, united kingdom2017-11-26v4No1 / 9
396amnondominant fish, cyprinus carpio, common carp, england, intestine, digestive system2018-11-14v4No1 / 9
605amnondominant australia, child, age 1-3 years, perth, recurrent otitis media, middle ear, middle ear rinse2020-04-07v3No1 / 11
396amnondominant fish, england, intestine, digestive system, oncorhynchus mykiss, rainbow trout2018-11-14v4No1 / 11
110amnoncommon water, drinking water, scotland, site c2017-04-08v4No1 / 12
605amnondominant australia, child, age 1-3 years, perth, recurrent otitis media, middle ear, middle ear fluid2020-04-07v3No1 / 12
605amnondominant australia, child, age 1-3 years, perth, recurrent otitis media, external acoustic meatus, ear canal2020-04-07v3No1 / 12
605amnon high in middle ear fluid compared to middle ear rinse in australia child age 1-3 years perth recurrent otitis media middle ear 2020-04-07v3No1 / 12
622amnondominant caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 13
605amnoncommon australia, nasopharynx, child, age 1-3 years, perth, recurrent otitis media2020-04-07v3No1 / 13
605amnondominant australia, nasopharynx, child, age 1-3 years, perth, recurrent otitis media2020-04-07v3No1 / 13
579amnonhigh freq. in pond water of mud crab aquaculture (dominant china, pond, saline water, saline water aquarium, fish farm, scylla paramamosain, mud crab, summer, autumn)2020-01-14v3No1 / 13
379amnonlower in chickens infeceted with campylobacter at age 20 days compared to noninfected controls ( high in control compared to campylobacter in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 14
448amnondominant equus caballus, horse, feces, farm, equine grass sickness, disease, united kingdom2019-01-08v4No1 / 15
353amnonhigh freq. in captive Triturus cristatus newts skin (dominant newt, adult, skin, cambridgeshire, triturus cristatus, research facility, united kingdom)2018-07-30v4No1 / 16
84amnonincreases in drought in late time points ( high in drought environment timepoint compared to control in soil temperate grassland biome fen peat soil flooded grassland biome depth 5 cm united kingdom )2017-03-07v4No1 / 17
599amnoncommon equus caballus, horse, dentition, edinburgh, scotland, farm2020-03-25v4No1 / 18
599amnondominant equus caballus, horse, dentition, edinburgh, scotland, farm2020-03-25v4No1 / 18
355amnondominant canada, province of british columbia, calvert island, pacific ocean, ocean, alga, ulva lactuca, ulva2018-08-01v4No1 / 18
256amnondominant sus scrofa, pig, caecum, right colon, left colon, united kingdom2017-11-26v4No1 / 18
353amnonhigh freq. in captive Lissotriton vulgaris newts skin (dominant newt, adult, skin, cambridgeshire, research facility, lissotriton vulgaris, united kingdom)2018-07-30v4No1 / 19
579amnonhigh freq. in pond water of mud crab aquaculture (dominant china, pond, saline water, saline water aquarium, fish farm, scylla paramamosain, mud crab, spring)2020-01-14v3No1 / 19
110amnoncommon water, drinking water, scotland, site b2017-04-08v4No1 / 20
122amnondominant homo sapiens, feces, united kingdom2017-04-13v4No1 / 20
396amnoncommon fish, england, intestine, digestive system, oncorhynchus mykiss, rainbow trout2018-11-14v4No1 / 20
110amnoncommon water, drinking water, scotland, site a2017-04-08v4No1 / 21
225amnonhigh freq. in wild type cotrols (dominant mouse, mus musculus, feces, research facility, wild type genotype, united kingdom)2017-10-29v4No1 / 21
73amnondominant homo sapiens, feces, adult, glasgow2017-02-26v4No1 / 22
225amnonhigh freq. in polgA mutants (accelerated aging) (dominant mouse, mus musculus, feces, research facility, polga mutant, united kingdom)2017-10-29v4No1 / 22
605amnon high in middle ear rinse compared to middle ear fluid in australia child age 1-3 years perth recurrent otitis media middle ear 2020-04-07v3No1 / 23
379amnondominant gallus gallus, chicken, feces, age 15 - 35 days, united kingdom2018-09-14v4No1 / 24
605amnon high in control compared to recurrent otitis media in australia nasopharynx child age 1-3 years perth 2020-04-07v3No1 / 26
622amnon high in ileum compared to caecum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 28
379amnonlower in chickens infeceted with campylobacter at age 6 days compared to noninfected controls ( high in control compared to campylobacter in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 32
110amnoncommon water, drinking water, scotland, site d2017-04-08v4No1 / 35
84amnondisappears in drought in late time points ( high in control compared to drought environment timepoint in soil temperate grassland biome fen peat soil flooded grassland biome depth 5 cm united kingdom )2017-03-07v4No1 / 36
110amnoncommon water, drinking water, scotland, site e2017-04-08v4No1 / 43
244amnoncommon drosophila melanogaster, fruit fly, research facility, digestive system, united kingdom2017-11-15v4No1 / 44
396amnoncommon fish, cyprinus carpio, common carp, england, intestine, digestive system2018-11-14v4No1 / 44
379amnonnegatively correlated with age 8-35 days in chickens ( high in young age compared to age old age in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 46
256amnonlower in intestinal contents compared to mucosal scraping in pig caecum ( high in mucosa compared to intestinal contents in sus scrofa pig caecum united kingdom )2017-11-26v4No1 / 49
225amnonhigher in polgA mutants (accelarated aging) compared to wild type ( high in polga mutatnt compared to wild type genotype in mouse mus musculus feces research facility united kingdom )2017-10-29v4No1 / 52
448amnoncommon equus caballus, horse, feces, farm, equine grass sickness, disease, united kingdom2019-01-08v4No1 / 64
379amnonhigher in chickens infeceted with campylobacter at age 6 days compared to noninfected controls ( high in campylobacter compared to control in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 68
448amnon high in equine grass sickness disease compared to control in equus caballus horse feces farm united kingdom 2019-01-08v4No1 / 71
122amnonpositively correlated with bmi ( high in body mass index high bmi compared to low bmi in homo sapiens feces united kingdom )2017-04-13v4No1 / 76
353amnoncommon in captive Triturus cristatus newts skin (common newt, adult, skin, cambridgeshire, triturus cristatus, research facility, united kingdom)2018-07-30v4No1 / 83
353amnoncommon in captive Lissotriton vulgaris newts skin (common newt, adult, skin, cambridgeshire, research facility, lissotriton vulgaris, united kingdom)2018-07-30v4No1 / 85
355amnoncommon canada, province of british columbia, calvert island, pacific ocean, ocean, alga, ulva lactuca, ulva2018-08-01v4No1 / 93
256amnonhigher in intestinal contents compared to mucosal scraping in pig caecum ( high in intestinal contents compared to mucosa in sus scrofa pig caecum united kingdom )2017-11-26v4No1 / 102
256amnonhigher in control diet compared to diet enriched with sucram in pig gut ( high in diet standard feed compared to sucram in gastrointestinal system sus scrofa pig united kingdom )2017-11-26v4No1 / 108
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in newt adult skin cambridgeshire lissotriton vulgaris united kingdom )2018-07-30v4No1 / 109
73amnonhigh in healthy adult controls compared to children with Crohn's disease ( high in control adult compared to obsolete_juvenile stage child crohn's disease in glasgow feces homo sapiens )2017-02-26v4No1 / 124
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in newt adult skin cambridgeshire triturus cristatus united kingdom )2018-07-30v4No1 / 134
225amnonlower in polgA mutants (accelarated aging) compared to wild type ( high in wild type genotype compared to polga mutant in mouse mus musculus feces research facility united kingdom )2017-10-29v4No1 / 138
396amnon high in rainbow trout oncorhynchus mykiss compared to common carp cyprinus carpio in fish england intestine digestive system 2018-11-14v4No1 / 141
605amnon high in recurrent otitis media compared to control in australia nasopharynx child age 1-3 years perth 2020-04-07v3No1 / 148
73amnoncommon homo sapiens, feces, adult, glasgow2017-02-26v4No1 / 149
122amnoncommon homo sapiens, feces, united kingdom2017-04-13v4No1 / 156
379amnoncommon gallus gallus, chicken, feces, age 15 - 35 days, united kingdom2018-09-14v4No1 / 159
579amnoncommon in pond water of mud crab aquaculture (common china, pond, saline water, saline water aquarium, fish farm, scylla paramamosain, mud crab, spring)2020-01-14v3No1 / 172
396amnon high in common carp cyprinus carpio compared to rainbow trout oncorhynchus mykiss in fish england intestine digestive system 2018-11-14v4No1 / 183
73amnonhigh in children with Crohn's disease compared to healthy adult controls ( high in obsolete_juvenile stage child crohn's disease compared to control adult in homo sapiens feces glasgow )2017-02-26v4No1 / 188
256amnonlower in control diet compared to diet enriched with sucram in pig gut ( high in diet sucram compared to standard feed in sus scrofa pig gastrointestinal system united kingdom )2017-11-26v4No1 / 226
622amnoncommon caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 243
379amnonpositively correlated with age 8-35 days in chickens ( high in age old age compared to young age in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 270
225amnoncommon in polgA mutants (accelerated aging) (common mouse, mus musculus, feces, research facility, polga mutant, united kingdom)2017-10-29v4No1 / 280
622amnon high in caecum compared to ileum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 306
122amnonnegatively correlated with bmi ( high in body mass index low bmi compared to high bmi in homo sapiens feces united kingdom )2017-04-13v4No1 / 344
225amnoncommon in wild type cotrols (common mouse, mus musculus, feces, research facility, wild type genotype, united kingdom)2017-10-29v4No1 / 369
256amnoncommon sus scrofa, pig, duodenum, jejunum, ileum, united kingdom2017-11-26v4No1 / 379
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 386
353amnoncommon in wild Lissotriton vulgaris newts skin (common newt, adult, skin, lissotriton vulgaris, cambridgeshire, united kingdom)2018-07-30v4No1 / 417
353amnoncommon in wild Triturus cristatus newts skin (common newt, adult, skin, cambridgeshire, triturus cristatus, united kingdom)2018-07-30v4No1 / 455
256amnoncommon sus scrofa, pig, caecum, right colon, left colon, united kingdom2017-11-26v4No1 / 489
448amnoncommon in healthy horse feces (common equus caballus, horse, feces, farm, control, united kingdom)2019-01-08v4No1 / 507
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 739
448amnon high in control compared to equine grass sickness disease in equus caballus horse feces farm united kingdom 2019-01-08v4No1 / 1083
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in newt adult skin cambridgeshire triturus cristatus united kingdom )2018-07-30v4No1 / 1833
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in newt adult skin cambridgeshire lissotriton vulgaris united kingdom )2018-07-30v4No1 / 2161
84amnoncommon soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 20 cm, united kingdom2017-03-06v4No1 / 2865
84amnoncommon soil, temperate grassland biome, fen, peat soil, flooded grassland biome, depth 5 cm, united kingdom2017-03-07v4No1 / 3433

Problems / suggestions? Please email info AT dbbact DOT org