Summary for ontology term: vagina

Number of annotations with term: 40

Annotations:

common ontology terms
term enrichment score
TermScore
vagina0.936000
phoenix0.285714
pregnancy0.282609
ismailia0.230769
state of arizona0.222222
age 25-45 years0.206897
indian rhesus macaque0.166667
cayo santiago0.166667
municipality of yogyakarta0.166667
indonesia0.166667
egypt0.157895
female0.146751
age > 1 year0.142857
puerto rico0.142857
non-pregnant0.130435
pregnancy trimester 20.130435
dysplasia of cervix0.130435
macaca mulatta0.125000
south africa0.117647
invasive carcinoma0.090909
invasive cervical carcinoma0.090909
cervical carcinoma0.090909
age 90 weeks0.090909
female organism0.078947
adult organism0.071429
state of michigan0.068966
pig0.055556
sus scrofa0.055556
gallus gallus0.055556
chicken0.055556
LOWER IN pregnancy trimester 20.047619
LOWER IN pregnancy0.047619
LOWER IN non-pregnant0.047619
african0.047619
LOWER IN african0.047619
LOWER IN bacterial vaginosis0.047619
bacterial vaginosis0.047619
LOWER IN dysplasia of cervix0.047619
LOWER IN last trimester0.047619
last trimerster0.047619
LOWER IN first trimester0.047619
premature birth0.047619
LOWER IN premature birth0.047619
LOWER IN vagina0.047619
LOWER IN penis0.047619
LOWER IN birth in over 6 months0.047619
birth during last 6 months0.047619
LOWER IN birth during last 6 months0.047619
birth in over 6 months0.047619
LOWER IN african american0.046512
first trimester0.046512
penis0.046512
LOWER IN caucasian0.045455
african american0.045455
caucasian0.045455
homo sapiens0.044693
LOWER IN male organism0.044444
LOWER IN female organism0.043478
male organism0.041667
farm0.036364
adult0.035156
united states of america0.032129
control0.030612
LOWER IN control0.028571
research facility0.012270
china0.011429
Fraction of dbbact annotations with this term covered by the query
TermScore
vagina0.900000
LOWER IN pregnancy trimester 20.500000
LOWER IN pregnancy0.500000
non-pregnant0.500000
ismailia0.500000
LOWER IN non-pregnant0.500000
pregnancy trimester 20.500000
african0.500000
LOWER IN african0.500000
LOWER IN bacterial vaginosis0.500000
bacterial vaginosis0.500000
phoenix0.500000
invasive carcinoma0.500000
invasive cervical carcinoma0.500000
cervical carcinoma0.500000
dysplasia of cervix0.500000
LOWER IN dysplasia of cervix0.500000
LOWER IN last trimester0.500000
last trimerster0.500000
LOWER IN first trimester0.500000
premature birth0.500000
LOWER IN premature birth0.500000
age 90 weeks0.500000
LOWER IN vagina0.500000
indian rhesus macaque0.500000
cayo santiago0.500000
LOWER IN penis0.500000
LOWER IN birth in over 6 months0.500000
birth during last 6 months0.500000
municipality of yogyakarta0.500000
indonesia0.500000
LOWER IN birth during last 6 months0.500000
birth in over 6 months0.500000
age 25-45 years0.333333
LOWER IN african american0.333333
first trimester0.333333
penis0.333333
pregnancy0.250000
LOWER IN caucasian0.250000
african american0.250000
caucasian0.250000
state of arizona0.250000
age > 1 year0.250000
puerto rico0.250000
LOWER IN male organism0.200000
egypt0.166667
LOWER IN female organism0.166667
macaca mulatta0.166667
south africa0.142857
adult organism0.125000
male organism0.125000
state of michigan0.111111
female organism0.083333
female0.081967
pig0.062500
sus scrofa0.062500
gallus gallus0.062500
chicken0.062500
farm0.028571
homo sapiens0.022989
adult0.018293
LOWER IN control0.017647
control0.017442
united states of america0.016598
research facility0.006993
china0.006452
Fraction of annotations for the query sequences containing the term
TermScore
vagina0.975000
homo sapiens0.800000
female0.700000
united states of america0.500000
adult0.450000
pregnancy0.325000
phoenix0.200000
state of arizona0.200000
age 25-45 years0.150000
ismailia0.150000
egypt0.150000
control0.125000
south africa0.100000
age > 1 year0.100000
indian rhesus macaque0.100000
macaca mulatta0.100000
cayo santiago0.100000
puerto rico0.100000
municipality of yogyakarta0.100000
indonesia0.100000
non-pregnant0.075000
pregnancy trimester 20.075000
LOWER IN control0.075000
dysplasia of cervix0.075000
female organism0.075000
pig0.050000
sus scrofa0.050000
state of michigan0.050000
farm0.050000
invasive carcinoma0.050000
invasive cervical carcinoma0.050000
cervical carcinoma0.050000
age 90 weeks0.050000
adult organism0.050000
research facility0.050000
china0.050000
gallus gallus0.050000
chicken0.050000
LOWER IN pregnancy trimester 20.025000
LOWER IN pregnancy0.025000
LOWER IN non-pregnant0.025000
LOWER IN caucasian0.025000
african american0.025000
african0.025000
caucasian0.025000
LOWER IN african0.025000
LOWER IN african american0.025000
LOWER IN bacterial vaginosis0.025000
bacterial vaginosis0.025000
LOWER IN dysplasia of cervix0.025000
first trimester0.025000
LOWER IN last trimester0.025000
last trimerster0.025000
LOWER IN first trimester0.025000
premature birth0.025000
LOWER IN premature birth0.025000
LOWER IN vagina0.025000
LOWER IN female organism0.025000
penis0.025000
male organism0.025000
LOWER IN male organism0.025000
LOWER IN penis0.025000
LOWER IN birth in over 6 months0.025000
birth during last 6 months0.025000
LOWER IN birth during last 6 months0.025000
birth in over 6 months0.025000
Exp. ID User ID Description Date Region Flag Sequences
723amnonlower in females that gave birth during last 6 months ( high in birth in over 6 months compared to birth during last 6 months in municipality of yogyakarta vagina adult female indonesia homo sapiens )2021-01-02v3No1 / 1
191amnondecreases during pregnancy ( high in first trimester compared to last trimester in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 3
528amnoncommon homo sapiens, female, vagina, pregnancy, united states of america2019-07-14v1No1 / 5
535amnoncommon in healthy adult vaginal samples (common homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, control)2019-07-25v4No1 / 7
191amnonincreases during pregnancy ( high in last trimerster compared to first trimester in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 7
535amnon high in dysplasia of cervix compared to control in homo sapiens vagina female adult united states of america phoenix state of arizona 2019-07-25v4No1 / 9
724amnon high in pregnancy pregnancy trimester 2 compared to non-pregnant in age 25-45 years ismailia egypt adult female vagina homo sapiens 2021-01-03v3No1 / 10
724amnondominant non-pregnant, age 25-45 years, ismailia, egypt, adult, female, vagina, homo sapiens2021-01-03v3No1 / 10
535amnonhigh freq. in healthy adult vaginal samples (dominant homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, control)2019-07-25v4No1 / 11
535amnoncommon in adult vaginal samples with ICC (common homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, invasive carcinoma, invasive cervical carcinoma, cervical carcinoma)2019-07-25v4No1 / 11
535amnonhcommon in adult vaginal samples with cervical dysplasia (common homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, dysplasia of cervix)2019-07-25v4No1 / 11
191amnondominant homo sapiens, vagina, female, united states of america, pregnancy2017-09-05v4No1 / 11
724amnondominant pregnancy trimester 2, pregnancy, age 25-45 years, ismailia, egypt, adult, female, vagina, homo sapiens2021-01-03v3No1 / 12
389amnondominant pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 13
795amnoncommon vagina, age 90 weeks, adult organism, research facility, china, gallus gallus, chicken2021-06-08v4No1 / 13
770amnondominant vagina, female organism, age > 1 year, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v4No1 / 14
723amnoncommon municipality of yogyakarta, vagina, adult, female, indonesia, homo sapiens2021-01-02v3No1 / 15
528amnondominant homo sapiens, female, vagina, pregnancy, united states of america2019-07-14v1No1 / 16
213amnondominant homo sapiens, south africa, vagina2017-10-22v4No1 / 16
535amnonhigh freq. in adult vaginal samples with cervical dysplasia (dominant homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, dysplasia of cervix)2019-07-25v4No1 / 16
535amnon high in control compared to dysplasia of cervix in homo sapiens vagina female adult united states of america phoenix state of arizona 2019-07-25v4No1 / 16
724amnoncommon non-pregnant, age 25-45 years, ismailia, egypt, adult, female, vagina, homo sapiens2021-01-03v3No1 / 17
724amnoncommon pregnancy trimester 2, pregnancy, age 25-45 years, ismailia, egypt, adult, female, vagina, homo sapiens2021-01-03v3No1 / 18
535amnonhigh freq. in adult vaginal samples with ICC (dominant homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, invasive carcinoma, invasive cervical carcinoma, cervical carcinoma)2019-07-25v4No1 / 20
191amnonhigher in preterm birth vaginal samples ( high in premature birth compared to control in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 22
795amnondominant vagina, age 90 weeks, adult organism, research facility, china, gallus gallus, chicken2021-06-08v4No1 / 23
723amnondominant municipality of yogyakarta, vagina, adult, female, indonesia, homo sapiens2021-01-02v3No1 / 24
724amnon high in non-pregnant compared to pregnancy trimester 2 pregnancy in age 25-45 years ismailia egypt adult female vagina homo sapiens 2021-01-03v3No1 / 29
191amnoncommon homo sapiens, vagina, female, united states of america, pregnancy2017-09-05v4No1 / 31
528amnon high in african american african compared to caucasian in united states of america pregnancy vagina female homo sapiens 2019-07-14v1No1 / 34
191amnonlower in preterm birth vaginal samples ( high in control compared to premature birth in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 37
528amnon high in caucasian compared to african african american in homo sapiens female vagina pregnancy united states of america 2019-07-14v1No1 / 38
213amnonhigher in patients with bacterial vaginosis compared to healthy controls ( high in bacterial vaginosis compared to control in homo sapiens vagina south africa )2017-10-31v4No1 / 38
723amnonhigher in females that gave birth during last 6 months ( high in birth during last 6 months compared to birth in over 6 months in municipality of yogyakarta vagina adult female indonesia homo sapiens )2021-01-02v3No1 / 38
389amnoncommon pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 43
770amnon high in penis male organism compared to vagina female organism in age > 1 year indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v4No1 / 95
213amnoncommon homo sapiens, south africa, vagina2017-10-22v4No1 / 103
213amnonlower in patients with bacterial vaginosis compared to healthy controls ( high in control compared to bacterial vaginosis in homo sapiens vagina south africa )2017-10-31v4No1 / 107
770amnon high in vagina female organism compared to male organism penis in age > 1 year indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v4No1 / 138
770amnoncommon vagina, female organism, age > 1 year, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v4No1 / 169

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