Search result for sequence:
GACGTAGGGTCCAAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCGCGTAGGCGGCTCGTTAAGTGTGAAGTGAAATCTCCAGGGCTCAACCCGGAAACTGCTTTACATACTGGCGAGCTGGAGTGATGAAGAGGTTTGTGGAATTCCTG
common ontology terms
term enrichment score
TermScore
rice0.190476
lathyrus pratensis0.190476
meadow pea-vine0.190476
province of quebec0.173913
oryza sativa0.166667
rhizosphere0.117073
central park0.105263
LOWER IN soilwater0.105263
LOWER IN hedge bedstraw0.105263
LOWER IN galium mollugo0.105263
other plants0.105263
LOWER IN other plants0.105263
festuca rubra0.105263
red fescue grass0.105263
galium mollugo0.105263
hedge bedstraw0.105263
geranium pratense0.105263
meadow geranium0.105263
onobrychis viciifolia0.105263
common sainfoin0.105263
plantago lanceolata0.105263
ribwort plantain0.105263
prunella vulgaris0.105263
woundwort0.105263
veronica chamaedrys0.105263
germander speedwell0.105263
mediterranean forest biome0.105263
minas gerais state0.105263
campos rupestres0.105263
barbacenia macrantha0.105263
park0.100000
ph<60.100000
LOWER IN ph&gt;60.100000
ph 5.60.100000
urban biome0.095238
root endosphere0.095238
soil0.086831
new york city0.083333
topsoil0.076923
forest ecosystem0.076923
woodland area0.071429
depth (soil) 0-10cm0.066667
LOWER IN root0.062500
root0.062500
germany0.059347
brazil0.055556
canada0.051948
state of california0.045455
ph0.028169
LOWER IN water0.027778
united states of america0.014493
Fraction of dbbact annotations with this term covered by the query
TermScore
central park0.500000
rice0.500000
LOWER IN soilwater0.500000
LOWER IN hedge bedstraw0.500000
LOWER IN galium mollugo0.500000
other plants0.500000
lathyrus pratensis0.500000
meadow pea-vine0.500000
LOWER IN other plants0.500000
festuca rubra0.500000
red fescue grass0.500000
galium mollugo0.500000
hedge bedstraw0.500000
geranium pratense0.500000
meadow geranium0.500000
onobrychis viciifolia0.500000
common sainfoin0.500000
plantago lanceolata0.500000
ribwort plantain0.500000
prunella vulgaris0.500000
woundwort0.500000
veronica chamaedrys0.500000
germander speedwell0.500000
mediterranean forest biome0.500000
minas gerais state0.500000
campos rupestres0.500000
barbacenia macrantha0.500000
park0.333333
ph<60.333333
LOWER IN ph&gt;60.333333
ph 5.60.333333
province of quebec0.333333
oryza sativa0.285714
urban biome0.250000
root endosphere0.250000
new york city0.142857
topsoil0.111111
forest ecosystem0.111111
woodland area0.090909
depth (soil) 0-10cm0.076923
LOWER IN root0.066667
root0.066667
rhizosphere0.063830
brazil0.052632
soil0.049505
state of california0.037037
canada0.033333
germany0.031250
ph0.018519
LOWER IN water0.018182
united states of america0.007722
Fraction of annotations for the query sequences containing the term
TermScore
rhizosphere0.705882
germany0.588235
soil0.352941
oryza sativa0.117647
rice0.117647
united states of america0.117647
canada0.117647
province of quebec0.117647
lathyrus pratensis0.117647
meadow pea-vine0.117647
urban biome0.058824
park0.058824
new york city0.058824
central park0.058824
ph0.058824
ph<60.058824
LOWER IN ph&gt;60.058824
ph 5.60.058824
state of california0.058824
LOWER IN root0.058824
LOWER IN soilwater0.058824
LOWER IN water0.058824
LOWER IN hedge bedstraw0.058824
LOWER IN galium mollugo0.058824
other plants0.058824
LOWER IN other plants0.058824
festuca rubra0.058824
red fescue grass0.058824
galium mollugo0.058824
hedge bedstraw0.058824
geranium pratense0.058824
meadow geranium0.058824
onobrychis viciifolia0.058824
common sainfoin0.058824
plantago lanceolata0.058824
ribwort plantain0.058824
prunella vulgaris0.058824
woundwort0.058824
veronica chamaedrys0.058824
germander speedwell0.058824
topsoil0.058824
depth (soil) 0-10cm0.058824
mediterranean forest biome0.058824
forest ecosystem0.058824
woodland area0.058824
minas gerais state0.058824
campos rupestres0.058824
brazil0.058824
barbacenia macrantha0.058824
root endosphere0.058824
root0.058824
Exp. ID User ID Description Date Region Flag Sequences
309amnon high in other plants compared to hedge bedstraw galium mollugo in rhizosphere germany 2018-04-05v4No1 / 110
357amnoncommon soil, topsoil, depth (soil) 0-10cm, mediterranean forest biome, forest ecosystem, woodland area2018-08-19v4No1 / 564
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
309amnon high in lathyrus pratensis meadow pea-vine compared to other plants in rhizosphere germany 2018-04-05v4No1 / 680
265amnoncommon canada, province of quebec, soil2017-12-11v4No1 / 1090
309amnoncommon rhizosphere, germany, prunella vulgaris, woundwort2018-04-05v4No1 / 1217
309amnoncommon lathyrus pratensis, rhizosphere, germany, meadow pea-vine2018-04-05v4No1 / 1296
309amnoncommon rhizosphere, germany, onobrychis viciifolia, common sainfoin2018-04-05v4No1 / 1323
309amnoncommon rhizosphere, germany, plantago lanceolata, ribwort plantain2018-04-05v4No1 / 1386
309amnoncommon rhizosphere, germany, geranium pratense, meadow geranium2018-04-05v4No1 / 1434
309amnoncommon rhizosphere, germany, festuca rubra, red fescue grass2018-04-05v4No1 / 1510
145amnoncommon soil, rhizosphere, oryza sativa, rice, united states of america, ph 5.62017-04-19v4No1 / 1515
309amnoncommon rhizosphere, germany, galium mollugo, hedge bedstraw2018-04-05v4No1 / 1599
309amnoncommon rhizosphere, germany, veronica chamaedrys, germander speedwell2018-04-05v4No1 / 1788
265amnon high in soil compared to soilwater water in canada province of quebec 2017-12-11v4No1 / 2715
100amnon high in ph ph<6 compared to ph>6 in soil urban biome park new york city central park 2017-04-03v4No1 / 5770
171amnonlower in roots compared to rhizosphere soil in rice ( high in rhizosphere soil compared to root in united states of america state of california oryza sativa rice )2017-07-25v4No1 / 7628

Problems / suggestions? Please email info AT dbbact DOT org