Search result for sequence:
TACAGAGGTCTCAAGCGTTGTTCGGATTCATTGGGCGTAAAGGGCGCGTAGGCGGCGGGGTAAGTCTGGTGTGAAATCTCGGAGCTCAACTCCGAAATTGCACTGGATACTGCTCTGCTTGAGGGTTGGAGAGGAGATCGGAATTCACGG
common ontology terms
term enrichment score
TermScore
minas gerais state0.545455
campos rupestres0.545455
vellozia epidendroides0.400000
topsoil0.242424
forest ecosystem0.242424
barbacenia macrantha0.210526
depth (soil) 0-10cm0.195122
brazil0.181818
woodland area0.125000
central park0.117647
ph 5.40.117647
moist tropical forest0.117647
ph>4.50.117647
LOWER IN ph<4.50.117647
montane forest0.117647
savanna0.117647
ph 3.50.117647
park0.111111
ph<60.111111
LOWER IN ph&gt;60.111111
hokkaido0.111111
soybean0.111111
ph 4-60.111111
root0.106667
urban biome0.105263
root endosphere0.105263
new york city0.090909
glycine max0.090909
stem0.090909
soil0.089514
cultivated environment0.086957
rock0.086957
japan0.062500
plant0.040816
farm0.038462
rhizosphere0.036697
LOWER IN rhizosphere0.032258
ph0.028986
Fraction of dbbact annotations with this term covered by the query
TermScore
central park0.500000
ph 5.40.500000
moist tropical forest0.500000
ph>4.50.500000
LOWER IN ph&lt;4.50.500000
montane forest0.500000
savanna0.500000
minas gerais state0.500000
campos rupestres0.500000
ph 3.50.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
park0.333333
ph<60.333333
LOWER IN ph&gt;60.333333
hokkaido0.333333
soybean0.333333
ph 4-60.333333
urban biome0.250000
root endosphere0.250000
topsoil0.222222
forest ecosystem0.222222
depth (soil) 0-10cm0.153846
new york city0.142857
glycine max0.142857
stem0.142857
cultivated environment0.125000
rock0.125000
brazil0.105263
woodland area0.090909
root0.066667
japan0.058824
soil0.049505
farm0.027027
plant0.022727
rhizosphere0.021277
LOWER IN rhizosphere0.021277
ph0.018519
Fraction of annotations for the query sequences containing the term
TermScore
brazil0.666667
minas gerais state0.600000
campos rupestres0.600000
soil0.466667
vellozia epidendroides0.333333
depth (soil) 0-10cm0.266667
topsoil0.266667
forest ecosystem0.266667
root0.266667
woodland area0.200000
plant0.200000
rhizosphere0.133333
barbacenia macrantha0.133333
urban biome0.066667
park0.066667
new york city0.066667
central park0.066667
ph0.066667
ph<60.066667
LOWER IN ph&gt;60.066667
hokkaido0.066667
ph 5.40.066667
japan0.066667
moist tropical forest0.066667
ph>4.50.066667
LOWER IN ph&lt;4.50.066667
montane forest0.066667
savanna0.066667
farm0.066667
glycine max0.066667
soybean0.066667
ph 4-60.066667
cultivated environment0.066667
ph 3.50.066667
LOWER IN rhizosphere0.066667
stem0.066667
rock0.066667
root endosphere0.066667
Exp. ID User ID Description Date Region Flag Sequences
548amnonhigh freq. in endopytic roots of Vellozia epidendroides (dominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 11
548amnon high in plant root compared to rhizosphere in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 100
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 431
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
357amnoncommon soil, topsoil, depth (soil) 0-10cm, montane forest, woodland area, forest ecosystem2018-08-19v4No1 / 592
357amnoncommon soil, topsoil, depth (soil) 0-10cm, savanna, forest ecosystem, woodland area2018-08-19v4No1 / 614
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth (soil) 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 834
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
474amnoncommon soil, farm, glycine max, soybean, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 974
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
548amnoncommon in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 1483
357amnon high in ph>4.5 compared to ph<4.5 in soil topsoil depth (soil) 0-10cm moist tropical forest woodland area forest ecosystem 2018-08-18v4No1 / 2773
100amnon high in ph ph<6 compared to ph>6 in soil urban biome park new york city central park 2017-04-03v4No1 / 5770

Problems / suggestions? Please email info AT dbbact DOT org