Search result for sequence:
TACGAAGGGGGCTAGCGTTGCTCGGATTTACTGGGCGTAAAGGGCGCGTAGGCGGACAGTTAAGTCGGGGGTGAAAGCCCGGGGCTCAACCTCGGAATTGCCTTCGATACTGGCTGTCTTGAGTACGGGAGAGGTGTGTGGAACTCCGAG

Taxonomy: d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium

species # matches SILVA IDs
caulobacteraceae bacterium pmmr11jpom01000001,
common ontology terms
term enrichment score
TermScore
mexico0.224719
arachis hypogaea0.214286
peanut0.214286
soil0.205957
wheat0.203390
rhizosphere0.188976
ph 50.162162
myrtillocactus geometrizans0.153846
opuntia robusta0.153846
guanajuato0.153846
minas gerais state0.153846
campos rupestres0.153846
cactus0.142857
semi-arid0.142857
desert0.130435
topsoil0.129032
forest ecosystem0.129032
fertilized soil0.125000
woodland area0.121212
depth (soil) 0-10cm0.114286
LOWER IN root0.108108
state of california0.096000
triticum aestivum0.090909
maryland county0.083333
central park0.083333
ph<5.50.083333
LOWER IN ph&gt;5.50.083333
ph 6-6.50.083333
root zone soil0.083333
kakadu national park0.083333
LOWER IN uranium0.083333
LOWER IN high uranium0.083333
LOWER IN non-manured0.083333
north china plain0.083333
ph>4, ph<50.083333
savanna0.083333
subtropical broadleaf forest biome0.083333
agave0.083333
LOWER IN agave0.083333
barbacenia macrantha0.083333
coarse-loamy soil0.083333
day 820.083333
LOWER IN stover amended0.083333
LOWER IN late flowering stage0.083333
early flowering stage0.083333
cannabis sativa0.083333
park0.080000
LOWER IN non-fertilized soil0.080000
soybean0.080000
depth (soil) 0-5cm0.080000
unamended soil0.080000
urban biome0.076923
rice0.076923
LOWER IN root structure0.076923
root endosphere0.076923
LOWER IN leaf surface0.074074
manured soil0.071429
ph 60.071429
LOWER IN solanum lycopersicum0.068966
new york city0.068966
bulk soil0.068966
oryza sativa0.068966
glycine max0.068966
brazil0.066667
rock0.066667
guangdong province0.064516
depth (soil) 0-20cm0.063492
state of new york0.057143
agricultural feature0.055556
root0.054054
china0.050314
winter0.048780
leaf0.046512
LOWER IN leaf0.046512
australia0.040816
canada0.038462
sediment0.035714
farm0.033898
LOWER IN rhizosphere0.028986
ph0.026316
control0.018868
united states of america0.014235
Fraction of dbbact annotations with this term covered by the query
TermScore
maryland county0.500000
central park0.500000
ph<5.50.500000
LOWER IN ph&gt;5.50.500000
myrtillocactus geometrizans0.500000
opuntia robusta0.500000
ph 6-6.50.500000
root zone soil0.500000
kakadu national park0.500000
LOWER IN uranium0.500000
LOWER IN high uranium0.500000
arachis hypogaea0.500000
peanut0.500000
LOWER IN non-manured0.500000
north china plain0.500000
ph>4, ph<50.500000
savanna0.500000
subtropical broadleaf forest biome0.500000
guanajuato0.500000
agave0.500000
LOWER IN agave0.500000
minas gerais state0.500000
campos rupestres0.500000
barbacenia macrantha0.500000
coarse-loamy soil0.500000
day 820.500000
LOWER IN stover amended0.500000
LOWER IN late flowering stage0.500000
early flowering stage0.500000
cannabis sativa0.500000
wheat0.400000
park0.333333
cactus0.333333
semi-arid0.333333
LOWER IN non-fertilized soil0.333333
soybean0.333333
depth (soil) 0-5cm0.333333
unamended soil0.333333
urban biome0.250000
rice0.250000
LOWER IN root structure0.250000
root endosphere0.250000
mexico0.222222
topsoil0.222222
forest ecosystem0.222222
ph 50.200000
fertilized soil0.200000
LOWER IN leaf surface0.200000
woodland area0.181818
manured soil0.166667
ph 60.166667
depth (soil) 0-10cm0.153846
LOWER IN solanum lycopersicum0.142857
new york city0.142857
bulk soil0.142857
oryza sativa0.142857
glycine max0.142857
LOWER IN root0.133333
rhizosphere0.127660
desert0.125000
rock0.125000
soil0.118812
guangdong province0.111111
triticum aestivum0.090909
state of new york0.076923
state of california0.074074
agricultural feature0.071429
root0.066667
winter0.052632
brazil0.052632
depth (soil) 0-20cm0.048780
leaf0.047619
LOWER IN leaf0.047619
australia0.037037
canada0.033333
sediment0.029412
china0.027027
farm0.027027
LOWER IN rhizosphere0.021277
ph0.018519
control0.010526
united states of america0.007722
Fraction of annotations for the query sequences containing the term
TermScore
soil0.772727
rhizosphere0.363636
china0.363636
mexico0.227273
wheat0.136364
state of california0.136364
ph 50.136364
arachis hypogaea0.136364
peanut0.136364
desert0.136364
control0.090909
myrtillocactus geometrizans0.090909
opuntia robusta0.090909
cactus0.090909
semi-arid0.090909
triticum aestivum0.090909
united states of america0.090909
LOWER IN root0.090909
fertilized soil0.090909
depth (soil) 0-20cm0.090909
topsoil0.090909
depth (soil) 0-10cm0.090909
forest ecosystem0.090909
woodland area0.090909
guanajuato0.090909
minas gerais state0.090909
campos rupestres0.090909
brazil0.090909
maryland county0.045455
leaf0.045455
LOWER IN solanum lycopersicum0.045455
urban biome0.045455
park0.045455
new york city0.045455
central park0.045455
ph0.045455
ph<5.50.045455
LOWER IN ph&gt;5.50.045455
ph 6-6.50.045455
root zone soil0.045455
australia0.045455
kakadu national park0.045455
sediment0.045455
LOWER IN uranium0.045455
LOWER IN high uranium0.045455
bulk soil0.045455
oryza sativa0.045455
rice0.045455
manured soil0.045455
LOWER IN non-manured0.045455
LOWER IN non-fertilized soil0.045455
LOWER IN root structure0.045455
glycine max0.045455
soybean0.045455
north china plain0.045455
agricultural feature0.045455
winter0.045455
ph>4, ph<50.045455
savanna0.045455
guangdong province0.045455
subtropical broadleaf forest biome0.045455
LOWER IN leaf0.045455
LOWER IN leaf surface0.045455
agave0.045455
LOWER IN agave0.045455
LOWER IN rhizosphere0.045455
rock0.045455
barbacenia macrantha0.045455
root endosphere0.045455
root0.045455
depth (soil) 0-5cm0.045455
state of new york0.045455
coarse-loamy soil0.045455
ph 60.045455
day 820.045455
unamended soil0.045455
LOWER IN stover amended0.045455
LOWER IN late flowering stage0.045455
early flowering stage0.045455
canada0.045455
farm0.045455
cannabis sativa0.045455
Exp. ID User ID Description Date Region Flag Sequences
259amnonhigher in fertilized soil (npk) compared to non-fertilized ( high in fertilized soil compared to non-fertilized soil in soil rhizosphere ph 5 arachis hypogaea peanut china )2017-12-02v4No1 / 280
129amnoncommon mexico, myrtillocactus geometrizans, opuntia robusta, cactus, rhizosphere, semi-arid2017-04-15v4No1 / 338
360amnoncommon desert, soil, mexico, guanajuato2018-08-21v4No1 / 437
259amnonhigher in manured soil compared to non-manured ( high in manured soil compared to non-manured in soil rhizosphere ph 5 arachis hypogaea peanut fertilized soil china )2017-12-02v4No1 / 497
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
357amnoncommon soil, topsoil, depth (soil) 0-10cm, savanna, forest ecosystem, woodland area2018-08-19v4No1 / 614
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
359amnoncommon soil, topsoil, depth (soil) 0-10cm, guangdong province, subtropical broadleaf forest biome, china, forest ecosystem, woodland area2018-08-19v4No1 / 935
37amnonlower in tomato plant leaves compared to plastic control ( high in control compared to solanum lycopersicum in maryland county leaf )2016-12-09v4No1 / 950
129amnoncommon ph 6-6.5, mexico, myrtillocactus geometrizans, opuntia robusta, cactus, semi-arid, soil, root zone soil2017-04-15v4No1 / 968
360amnon high in soil compared to agave rhizosphere in desert mexico state of california 2018-08-21v4No1 / 992
618amnon high in early flowering stage compared to late flowering stage in rhizosphere canada farm cannabis sativa 2020-05-04v4No1 / 1040
360amnonlower in leaf surface compared to soil in agave plants ( high in soil compared to leaf leaf surface in desert state of california mexico guanajuato agave )2018-08-21v4No1 / 1108
259amnoncommon in soil and rhizpsphere of peanut plants (common soil, rhizosphere, ph 5, arachis hypogaea, peanut, china)2017-12-02v4No1 / 1334
600sheryolower in stover ammendment soil ( high in unamended soil compared to stover amended in depth (soil) 0-5cm state of new york soil united states of america coarse-loamy soil ph 6 day 82 )2020-03-27v4No1 / 1612
154amnon high in control compared to uranium high uranium in soil australia kakadu national park sediment 2017-06-29v4No1 / 1663
296amnoncommon depth (soil) 0-20cm, soil, north china plain, agricultural feature, wheat, winter, ph>4, ph<5, china2018-02-11v4No1 / 1886
155amnoncommon in soil loosely bound to wheat root (common triticum aestivum, wheat, soil, rhizosphere, china)2017-07-02v4No1 / 2425
155amnoncommon in bulk soil in wheat field (common triticum aestivum, wheat, soil, bulk soil, china)2017-07-02v4No1 / 2594
100amnon high in ph ph<5.5 compared to ph>5.5 in soil urban biome park new york city central park 2017-04-03v4No1 / 4262
171amnonlower in roots compared to rhizosphere soil in rice ( high in rhizosphere soil compared to root in united states of america state of california oryza sativa rice )2017-07-25v4No1 / 7628
271amnon high in soil rhizosphere compared to root structure root in depth (soil) 0-20cm glycine max soybean china 2018-01-09v4No1 / 7954

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