Search result for sequence:
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGACATTTAAGTTGGAGGTGAAAGCCTTGGGCTCAACCCAAGAATTGCCTTTGATACTGGATGTCTCGAGACCGGGAGAGGTGAGTGGAATTCCGAG
common ontology terms
term enrichment score
TermScore
soil0.321762
depth (soil) 0-10cm0.281690
minas gerais state0.237288
campos rupestres0.237288
forest ecosystem0.231884
topsoil0.183007
rhizosphere0.170732
permafrost0.150943
mesocosm0.150943
ph 60.140351
brazil0.132231
svalbard archipelago0.117647
barbacenia macrantha0.117647
coarse-loamy soil0.117647
day 820.117647
depth (soil) 0-5cm0.111111
farm0.109589
woodland area0.108108
depth (soil) 20-30cm0.105263
state of georgia0.103896
root0.088889
kingdom of norway0.086957
cinnamomum camphora0.085106
anxi county0.085106
soybean0.083333
ph 4-60.083333
taxus0.081633
taxus mairei0.081633
yellow brown soil0.081633
vellozia epidendroides0.081633
tundra0.080000
province of quebec0.078431
glycine max0.076923
nanjing city prefecture0.075472
cultivated environment0.075472
state of new york0.071429
tree0.061538
depth (soil) 0-20cm0.056338
ph 4-50.056338
china0.046921
quincy, fl0.042553
central park0.042553
southeast china0.042553
LOWER IN taxus media0.042553
LOWER IN taxus cuspidata0.042553
LOWER IN temperate0.042553
temperate0.042553
tomato0.042553
slit loam0.042553
pinus sibirica0.042553
pine forest0.042553
kakadu national park0.042553
LOWER IN uranium0.042553
LOWER IN high uranium0.042553
arachis hypogaea0.042553
peanut0.042553
LOWER IN soilwater0.042553
LOWER IN permafrost transition layer0.042553
LOWER IN depth 100-150cm0.042553
LOWER IN depth 150-200cm0.042553
ph 5.40.042553
moist tropical forest0.042553
temperate woodland biome0.042553
temperate deciduos forest0.042553
subpolar coniferous forest biome0.042553
boreal forest0.042553
montane forest0.042553
mediterranean forest biome0.042553
savanna0.042553
mature soil0.042553
fragaria x ananassa0.042553
strawberry0.042553
LOWER IN age 10 years0.042553
LOWER IN continuous cropping0.042553
ph 3.50.042553
stover ammendment 0.042553
cherokia georgiana georgiana0.042553
millipede0.042553
kellogg biological station0.042553
mesic type hapludalf0.042553
kalamazoo loam0.042553
panicum virgatum0.042553
elevation 2000-3000m0.042553
siliceous parent material0.042553
rhone river valley0.042553
alabama0.042553
upland soil0.042553
ultisol0.042553
park0.041667
ph<60.041667
LOWER IN ph&gt;60.041667
LOWER IN northeast china0.041667
subtropical0.041667
northeast china0.041667
siberia0.041667
non-fertilized soil0.041667
hokkaido0.041667
nenets autonomous okrug0.041667
pasture0.041667
LOWER IN plant litter0.041667
Fraction of dbbact annotations with this term covered by the query
TermScore
cinnamomum camphora1.000000
anxi county1.000000
soybean0.666667
ph 4-60.666667
quincy, fl0.500000
central park0.500000
taxus0.500000
taxus mairei0.500000
southeast china0.500000
LOWER IN taxus media0.500000
LOWER IN taxus cuspidata0.500000
LOWER IN temperate0.500000
temperate0.500000
tomato0.500000
slit loam0.500000
pinus sibirica0.500000
pine forest0.500000
kakadu national park0.500000
LOWER IN uranium0.500000
LOWER IN high uranium0.500000
arachis hypogaea0.500000
peanut0.500000
LOWER IN soilwater0.500000
svalbard archipelago0.500000
permafrost0.500000
LOWER IN permafrost transition layer0.500000
LOWER IN depth 100-150cm0.500000
LOWER IN depth 150-200cm0.500000
ph 5.40.500000
moist tropical forest0.500000
temperate woodland biome0.500000
temperate deciduos forest0.500000
subpolar coniferous forest biome0.500000
boreal forest0.500000
montane forest0.500000
mediterranean forest biome0.500000
savanna0.500000
mature soil0.500000
fragaria x ananassa0.500000
strawberry0.500000
yellow brown soil0.500000
LOWER IN age 10 years0.500000
LOWER IN continuous cropping0.500000
minas gerais state0.500000
campos rupestres0.500000
ph 3.50.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
coarse-loamy soil0.500000
day 820.500000
stover ammendment 0.500000
mesocosm0.500000
cherokia georgiana georgiana0.500000
millipede0.500000
kellogg biological station0.500000
mesic type hapludalf0.500000
kalamazoo loam0.500000
panicum virgatum0.500000
elevation 2000-3000m0.500000
siliceous parent material0.500000
rhone river valley0.500000
alabama0.500000
upland soil0.500000
ultisol0.500000
tundra0.400000
depth (soil) 0-10cm0.384615
park0.333333
ph<60.333333
LOWER IN ph&gt;60.333333
LOWER IN northeast china0.333333
subtropical0.333333
northeast china0.333333
ph 60.333333
siberia0.333333
forest ecosystem0.333333
non-fertilized soil0.333333
province of quebec0.333333
hokkaido0.333333
nenets autonomous okrug0.333333
pasture0.333333
depth (soil) 0-5cm0.333333
LOWER IN plant litter0.333333
plant litter0.333333
mountain0.333333
auburn0.333333
glycine max0.285714
urban biome0.250000
ph 40.250000
LOWER IN root structure0.250000
depth (soil) 20-30cm0.250000
ph<50.250000
LOWER IN ph&gt;50.250000
greenhouse soil0.250000
nanjing city prefecture0.250000
LOWER IN age 5 years0.250000
cultivated environment0.250000
root endosphere0.250000
topsoil0.222222
soil0.207921
citrus0.200000
Fraction of annotations for the query sequences containing the term
TermScore
soil0.711111
depth (soil) 0-10cm0.222222
rhizosphere0.200000
united states of america0.200000
china0.177778
forest ecosystem0.177778
brazil0.177778
topsoil0.155556
minas gerais state0.155556
campos rupestres0.155556
woodland area0.133333
farm0.111111
ph 60.088889
permafrost0.088889
mesocosm0.088889
state of georgia0.088889
root0.066667
depth (soil) 0-20cm0.066667
kingdom of norway0.066667
svalbard archipelago0.066667
depth (soil) 20-30cm0.066667
barbacenia macrantha0.066667
depth (soil) 0-5cm0.066667
state of new york0.066667
coarse-loamy soil0.066667
day 820.066667
tree0.044444
taxus0.044444
taxus mairei0.044444
tundra0.044444
canada0.044444
province of quebec0.044444
glycine max0.044444
soybean0.044444
yellow brown soil0.044444
nanjing city prefecture0.044444
cultivated environment0.044444
ph 4-60.044444
vellozia epidendroides0.044444
cinnamomum camphora0.044444
anxi county0.044444
ph 4-50.044444
citrus0.022222
quincy, fl0.022222
state of florida0.022222
urban biome0.022222
park0.022222
new york city0.022222
central park0.022222
ph0.022222
ph<60.022222
LOWER IN ph&gt;60.022222
southeast china0.022222
LOWER IN taxus media0.022222
LOWER IN taxus cuspidata0.022222
LOWER IN northeast china0.022222
subtropical0.022222
LOWER IN temperate0.022222
northeast china0.022222
temperate0.022222
solanum lycopersicum0.022222
tomato0.022222
slit loam0.022222
LOWER IN rhizosphere0.022222
pinus sibirica0.022222
pine forest0.022222
ph 40.022222
siberia0.022222
australia0.022222
kakadu national park0.022222
sediment0.022222
control0.022222
LOWER IN uranium0.022222
LOWER IN high uranium0.022222
ph 50.022222
arachis hypogaea0.022222
peanut0.022222
non-fertilized soil0.022222
LOWER IN fertilized soil0.022222
LOWER IN soilwater0.022222
LOWER IN water0.022222
LOWER IN root structure0.022222
LOWER IN root0.022222
LOWER IN depth (soil) 0-20cm0.022222
LOWER IN permafrost transition layer0.022222
LOWER IN depth 100-150cm0.022222
LOWER IN depth 150-200cm0.022222
hokkaido0.022222
ph 5.40.022222
japan0.022222
moist tropical forest0.022222
temperate woodland biome0.022222
temperate deciduos forest0.022222
ph<50.022222
LOWER IN ph&gt;50.022222
subpolar coniferous forest biome0.022222
boreal forest0.022222
montane forest0.022222
mediterranean forest biome0.022222
savanna0.022222
Exp. ID User ID Description Date Region Flag Sequences
357amnoncommon in moist tropical forest topsoil around the world (common soil, topsoil, depth (soil) 0-10cm, moist tropical forest, woodland area, forest ecosystem)2018-08-18v4No1 / 171
583amnoncommon soil, mountain, switzerland, ph 4-6, depth (soil) 0-10cm, elevation 2000-3000m, siliceous parent material, rhone river valley2020-01-27v3No1 / 234
788amnoncommon plant litter, mesocosm, state of georgia, united states of america2021-05-31v4No1 / 259
426amnon high in mature soil compared to sand in soil tundra permafrost russia nenets autonomous okrug 2018-12-08v4No1 / 377
147amnoncommon pinus sibirica, tundra, soil, pine forest, ph 4, siberia, forest ecosystem2017-04-20v4No1 / 416
989amnoncommon rhizosphere, depth (soil) 0-20cm, cinnamomum camphora, anxi county, ph 4-5, farm, china2022-12-26v3No1 / 476
259amnonlower in fertilized soil (npk) compared to non-fertilized ( high in non-fertilized soil compared to fertilized soil in soil rhizosphere ph 5 arachis hypogaea peanut china )2017-12-02v4No1 / 483
357amnoncommon soil, topsoil, depth (soil) 0-10cm, subpolar coniferous forest biome, boreal forest, woodland area, forest ecosystem2018-08-19v4No1 / 538
548amnoncommon in leaf surface of barbacenia macrantha (common minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 550
357amnoncommon soil, topsoil, depth (soil) 0-10cm, mediterranean forest biome, forest ecosystem, woodland area2018-08-19v4No1 / 564
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
357amnoncommon soil, topsoil, depth (soil) 0-10cm, montane forest, woodland area, forest ecosystem2018-08-19v4No1 / 592
788amnoncommon cherokia georgiana georgiana, millipede, feces, mesocosm, state of georgia, united states of america2021-05-31v4No1 / 607
357amnoncommon soil, topsoil, depth (soil) 0-10cm, savanna, forest ecosystem, woodland area2018-08-19v4No1 / 614
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
134amnon high in taxus mairei southeast china subtropical compared to taxus media taxus cuspidata northeast china temperate in rhizosphere tree taxus china 2017-04-16v4No1 / 694
347amnoncommon kingdom of norway, svalbard archipelago, permafrost, soil, depth (soil) 20-30cm2018-07-15v4No1 / 698
823sheryoCommon at 0-10cm depth in ultisol soil in auburn, alabama (common depth (soil) 0-10cm, auburn, alabama, upland soil, agricultural field, ultisol, soil)2021-08-07v3No1 / 730
989amnoncommon depth (soil) 0-20cm, cinnamomum camphora, anxi county, ph 4-5, farm, china, soil2022-12-26v3No1 / 738
347amnon high in depth (soil) 20-30cm compared to depth (soil) 0-20cm permafrost transition layer in kingdom of norway svalbard archipelago permafrost soil 2018-07-15v4No1 / 788
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth (soil) 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 834
788amnoncommon soil, mesocosm, state of georgia, united states of america2021-05-31v4No1 / 897
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
444amnoncommon in uncultivated soil plot (common yellow brown soil, nanjing city prefecture, soil, china)2019-01-07v4No1 / 946
98amnoncommon citrus, rhizosphere, quincy, fl, root, state of florida2017-04-01v4No1 / 950
480amnoncommon soil, pasture, farm, new zealand2019-02-05v4No1 / 970
134amnoncommon rhizosphere, tree, taxus, northeast china, temperate, taxus mairei, china2017-04-16v4No1 / 973
474amnoncommon soil, farm, glycine max, soybean, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 974
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
347amnon high in depth (soil) 20-30cm compared to depth 100-150cm depth 150-200cm in kingdom of norway svalbard archipelago permafrost soil 2018-07-15v4No1 / 1080
265amnoncommon canada, province of quebec, soil2017-12-11v4No1 / 1090
357amnon high in ph<5 compared to ph>5 in soil topsoil depth (soil) 0-10cm temperate woodland biome temperate deciduos forest woodland area forest ecosystem 2018-08-18v4No1 / 1104
146amnon high in soil compared to rhizosphere in united states of america solanum lycopersicum tomato slit loam ph 6 2017-04-20v4No1 / 1135
444amnonlower in continuously cropped strawberry soil ( high in age 1 year compared to age 5 years age 10 years continuous cropping in rhizosphere fragaria x ananassa strawberry greenhouse soil farm yellow brown soil nanjing city prefecture china cultivated environment )2019-01-07v4No1 / 1221
788amnon high in soil compared to plant litter in mesocosm state of georgia united states of america 2021-05-31v4No1 / 1280
600sheryoCommon in biochar ammended soil after 82 days (common depth (soil) 0-5cm, state of new york, soil, biochar, united states of america, coarse-loamy soil, ph 6, day 82)2020-03-27v4No1 / 1326
600sheryoCommon in stover ammended soil after 82 days (common depth (soil) 0-5cm, state of new york, soil, united states of america, coarse-loamy soil, ph 6, day 82, stover ammendment )2020-03-27v4No1 / 1327
600sheryoCommon in unammended soil after 82 days (common depth (soil) 0-5cm, state of new york, soil, united states of america, coarse-loamy soil, ph 6, day 82)2020-03-27v4No1 / 1395
548amnoncommon in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 1483
154amnon high in control compared to uranium high uranium in soil australia kakadu national park sediment 2017-06-29v4No1 / 1663
821sheryoCommon in soil of switchgrass field at 0-10cm depth, Michigan USA (common kellogg biological station, mesic type hapludalf, kalamazoo loam, panicum virgatum, depth (soil) 0-10cm, state of michigan, soil, united states of america)2021-08-02v4No1 / 2067
265amnon high in soil compared to soilwater water in canada province of quebec 2017-12-11v4No1 / 2715
100amnon high in ph ph<6 compared to ph>6 in soil urban biome park new york city central park 2017-04-03v4No1 / 5770
271amnon high in soil rhizosphere compared to root structure root in depth (soil) 0-20cm glycine max soybean china 2018-01-09v4No1 / 7954

Problems / suggestions? Please email info AT dbbact DOT org