Search result for sequence:
TACGGGGGGGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGTGCGTAGGCGGTTCGTTAAGTTAGATGTGAAAACTCTGGGCTCAACCCAGAGCCTGCATCTAAAACTGGCGGGCTAGAGTTCTGGAGGGGGTAGCGGAATTCCTGG
common ontology terms
term enrichment score
TermScore
minas gerais state0.518519
campos rupestres0.518519
vellozia epidendroides0.315789
barbacenia macrantha0.235294
LOWER IN root0.142857
central park0.133333
ph<5.50.133333
LOWER IN ph&gt;5.50.133333
kakadu national park0.133333
LOWER IN uranium0.133333
LOWER IN high uranium0.133333
subtropical broadleaf forest biome0.133333
ph 3.50.133333
park0.125000
ph 5.60.125000
LOWER IN soybean0.125000
soybean0.125000
urban biome0.117647
rice0.117647
LOWER IN root structure0.117647
root endosphere0.117647
rhizosphere0.109489
soil0.107006
new york city0.100000
oryza sativa0.100000
LOWER IN glycine max0.100000
glycine max0.100000
brazil0.095890
rock0.095238
root0.093023
topsoil0.090909
guangdong province0.090909
forest ecosystem0.090909
woodland area0.083333
depth (soil) 0-10cm0.076923
australia0.050000
sediment0.042553
depth (soil) 0-20cm0.042105
plant0.035088
LOWER IN rhizosphere0.033333
ph0.029851
china0.020654
control0.009852
united states of america0.007353
Fraction of dbbact annotations with this term covered by the query
TermScore
central park0.500000
ph<5.50.500000
LOWER IN ph&gt;5.50.500000
kakadu national park0.500000
LOWER IN uranium0.500000
LOWER IN high uranium0.500000
subtropical broadleaf forest biome0.500000
minas gerais state0.500000
campos rupestres0.500000
ph 3.50.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
park0.333333
ph 5.60.333333
LOWER IN soybean0.333333
soybean0.333333
urban biome0.250000
rice0.250000
LOWER IN root structure0.250000
root endosphere0.250000
new york city0.142857
oryza sativa0.142857
LOWER IN glycine max0.142857
glycine max0.142857
LOWER IN root0.133333
rock0.125000
topsoil0.111111
guangdong province0.111111
forest ecosystem0.111111
woodland area0.090909
depth (soil) 0-10cm0.076923
root0.066667
rhizosphere0.063830
soil0.059406
brazil0.052632
australia0.037037
sediment0.029412
depth (soil) 0-20cm0.024390
plant0.022727
LOWER IN rhizosphere0.021277
ph0.018519
china0.010811
control0.005263
united states of america0.003861
Fraction of annotations for the query sequences containing the term
TermScore
soil0.538462
minas gerais state0.538462
campos rupestres0.538462
brazil0.538462
rhizosphere0.384615
china0.230769
vellozia epidendroides0.230769
depth (soil) 0-20cm0.153846
LOWER IN root0.153846
root0.153846
barbacenia macrantha0.153846
urban biome0.076923
park0.076923
new york city0.076923
central park0.076923
ph0.076923
ph<5.50.076923
LOWER IN ph&gt;5.50.076923
oryza sativa0.076923
rice0.076923
united states of america0.076923
ph 5.60.076923
australia0.076923
kakadu national park0.076923
sediment0.076923
control0.076923
LOWER IN uranium0.076923
LOWER IN high uranium0.076923
LOWER IN rhizosphere0.076923
LOWER IN glycine max0.076923
LOWER IN soybean0.076923
LOWER IN root structure0.076923
glycine max0.076923
soybean0.076923
topsoil0.076923
depth (soil) 0-10cm0.076923
guangdong province0.076923
subtropical broadleaf forest biome0.076923
forest ecosystem0.076923
woodland area0.076923
ph 3.50.076923
plant0.076923
rock0.076923
root endosphere0.076923
Exp. ID User ID Description Date Region Flag Sequences
548amnon high in rhizosphere compared to root in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 197
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
359amnoncommon soil, topsoil, depth (soil) 0-10cm, guangdong province, subtropical broadleaf forest biome, china, forest ecosystem, woodland area2018-08-19v4No1 / 935
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
548amnoncommon in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 1483
145amnoncommon soil, rhizosphere, oryza sativa, rice, united states of america, ph 5.62017-04-19v4No1 / 1515
154amnon high in control compared to uranium high uranium in soil australia kakadu national park sediment 2017-06-29v4No1 / 1663
100amnon high in ph ph<5.5 compared to ph>5.5 in soil urban biome park new york city central park 2017-04-03v4No1 / 4262
271amnon high in soil compared to rhizosphere glycine max soybean in depth (soil) 0-20cm china 2018-01-09v4No1 / 4853
271amnon high in soil rhizosphere compared to root structure root in depth (soil) 0-20cm glycine max soybean china 2018-01-09v4No1 / 7954

Problems / suggestions? Please email info AT dbbact DOT org