dbBact sequence annotation

term enrichment score

Term	Score
root	0.465473
minas gerais state	0.363636
campos rupestres	0.363636
mexico	0.250000
myrtillocactus geometrizans	0.222222
opuntia robusta	0.222222
guanajuato	0.222222
vellozia epidendroides	0.222222
cactus	0.200000
semi-arid	0.200000
rhizosphere	0.188088
agave	0.176471
brazil	0.162602
citrus	0.139535
desert	0.133333
ph 6-6.5	0.125000
arachis hypogaea	0.125000
peanut	0.125000
root endosphere	0.125000
agave salmiana	0.125000
barbacenia macrantha	0.125000
campinas	0.125000
soil	0.117827
saccharum	0.117647
sugarcane	0.117647
endosphere	0.111111
LOWER IN rhizosphere	0.106667
ph 5	0.105263
greenhouse	0.100000
state of florida	0.073171
non-seleniferous	0.066667
LOWER IN seleniferous	0.066667
vero beach, fl	0.066667
quincy, fl	0.066667
ft. pierce, fl	0.066667
central park	0.066667
ph<5.5	0.066667
LOWER IN ph>5.5	0.066667
merlot	0.066667
grapevine	0.066667
root zone soil	0.066667
root interior	0.066667
ph 3.5	0.066667
LOWER IN selenium	0.064516
park	0.064516
vitis vinifera	0.064516
soybean	0.064516
pasture	0.064516
urban biome	0.062500
non-manured soil	0.062500
root structure	0.062500
fertilized soil	0.060606
LOWER IN leaf surface	0.060606
new zealand	0.060606
LOWER IN manured soil	0.058824
new york city	0.057143
glycine max	0.057143
rock	0.055556
woodland area	0.051282
state of new york	0.048780
LOWER IN leaf	0.040816
plant	0.037500
state of california	0.036364
farm	0.030769
depth (soil) 0-20cm	0.028986
ph	0.024390
china	0.019640
LOWER IN soil	0.015504
united states of america	0.013937

Fraction of dbbact annotations with this term covered by the query

Term	Score
non-seleniferous	0.500000
LOWER IN seleniferous	0.500000
vero beach, fl	0.500000
quincy, fl	0.500000
ft. pierce, fl	0.500000
central park	0.500000
ph<5.5	0.500000
LOWER IN ph>5.5	0.500000
merlot	0.500000
grapevine	0.500000
myrtillocactus geometrizans	0.500000
opuntia robusta	0.500000
ph 6-6.5	0.500000
root zone soil	0.500000
root interior	0.500000
arachis hypogaea	0.500000
peanut	0.500000
agave	0.500000
root endosphere	0.500000
agave salmiana	0.500000
guanajuato	0.500000
minas gerais state	0.500000
campos rupestres	0.500000
ph 3.5	0.500000
vellozia epidendroides	0.500000
barbacenia macrantha	0.500000
campinas	0.500000
root	0.466667
LOWER IN selenium	0.333333
park	0.333333
vitis vinifera	0.333333
cactus	0.333333
semi-arid	0.333333
soybean	0.333333
pasture	0.333333
saccharum	0.333333
sugarcane	0.333333
urban biome	0.250000
non-manured soil	0.250000
root structure	0.250000
endosphere	0.250000
mexico	0.222222
citrus	0.200000
ph 5	0.200000
fertilized soil	0.200000
LOWER IN leaf surface	0.200000
new zealand	0.200000
LOWER IN manured soil	0.166667
greenhouse	0.166667
new york city	0.142857
glycine max	0.142857
rhizosphere	0.127660
desert	0.125000
rock	0.125000
brazil	0.105263
woodland area	0.090909
LOWER IN rhizosphere	0.085106
state of new york	0.076923
soil	0.069307
state of florida	0.055556
LOWER IN leaf	0.047619
state of california	0.037037
farm	0.027027
depth (soil) 0-20cm	0.024390
plant	0.022727
ph	0.018519
china	0.010811
LOWER IN soil	0.009901
united states of america	0.007722

Fraction of annotations for the query sequences containing the term

Term	Score
root	0.464286
soil	0.392857
rhizosphere	0.357143
brazil	0.357143
mexico	0.285714
minas gerais state	0.285714
campos rupestres	0.285714
LOWER IN rhizosphere	0.142857
myrtillocactus geometrizans	0.142857
opuntia robusta	0.142857
cactus	0.142857
semi-arid	0.142857
desert	0.142857
guanajuato	0.142857
vellozia epidendroides	0.142857
citrus	0.107143
state of florida	0.107143
china	0.107143
agave	0.107143
plant	0.107143
united states of america	0.071429
ph 6-6.5	0.071429
ph 5	0.071429
arachis hypogaea	0.071429
peanut	0.071429
root endosphere	0.071429
agave salmiana	0.071429
barbacenia macrantha	0.071429
endosphere	0.071429
saccharum	0.071429
sugarcane	0.071429
campinas	0.071429
greenhouse	0.071429
LOWER IN selenium	0.035714
non-seleniferous	0.035714
LOWER IN seleniferous	0.035714
woodland area	0.035714
vero beach, fl	0.035714
quincy, fl	0.035714
ft. pierce, fl	0.035714
urban biome	0.035714
park	0.035714
new york city	0.035714
central park	0.035714
ph	0.035714
ph<5.5	0.035714
LOWER IN ph>5.5	0.035714
state of new york	0.035714
vitis vinifera	0.035714
merlot	0.035714
grapevine	0.035714
root zone soil	0.035714
root interior	0.035714
fertilized soil	0.035714
non-manured soil	0.035714
LOWER IN manured soil	0.035714
depth (soil) 0-20cm	0.035714
root structure	0.035714
LOWER IN soil	0.035714
glycine max	0.035714
soybean	0.035714
LOWER IN leaf	0.035714
LOWER IN leaf surface	0.035714
state of california	0.035714
pasture	0.035714
farm	0.035714
new zealand	0.035714
ph 3.5	0.035714
rock	0.035714

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
548	amnon	high freq. in endopytic roots of Vellozia epidendroides (dominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)	2019-08-15	v4	No	1 / 11
129	amnon	found INSIDE roots of cactus (common mexico, myrtillocactus geometrizans, opuntia robusta, cactus, semi-arid, root interior, root)	2017-04-15	v4	No	1 / 29
360	amnon	common agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root	2018-08-21	v4	No	1 / 87
548	amnon	high in plant root compared to rhizosphere in minas gerais state campos rupestres brazil vellozia epidendroides	2019-08-15	v4	No	1 / 100
271	amnon	high in root structure root compared to soil rhizosphere in depth (soil) 0-20cm glycine max soybean china	2018-01-09	v4	No	1 / 110
129	amnon	common mexico, myrtillocactus geometrizans, opuntia robusta, cactus, rhizosphere, semi-arid	2017-04-15	v4	No	1 / 338
259	amnon	lower in manured soil compared to non-manured ( high in non-manured soil compared to manured soil in soil rhizosphere ph 5 arachis hypogaea peanut fertilized soil china )	2017-12-02	v4	No	1 / 397
360	amnon	common desert, soil, mexico, guanajuato	2018-08-21	v4	No	1 / 437
360	amnon	common desert, soil, rhizosphere, agave, agave salmiana, mexico, guanajuato	2018-08-21	v4	No	1 / 484
615	amnon	high in endosphere root compared to rhizosphere in saccharum sugarcane campinas brazil greenhouse	2020-04-27	v4	No	1 / 529
98	amnon	common citrus, rhizosphere, vero beach, fl, root, state of florida	2017-04-01	v4	No	1 / 544
548	amnon	common minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root	2019-08-17	v4	No	1 / 575
548	amnon	common minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere	2019-08-17	v4	No	1 / 651
615	amnon	common endosphere, root, saccharum, sugarcane, campinas, brazil, greenhouse	2020-04-27	v4	No	1 / 776
548	amnon	common in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)	2019-08-15	v4	No	1 / 800
129	amnon	common ph 6-6.5, mexico, myrtillocactus geometrizans, opuntia robusta, cactus, semi-arid, soil	2017-04-15	v4	No	1 / 884
548	amnon	common minas gerais state, campos rupestres, brazil, rock	2019-08-17	v4	No	1 / 924
98	amnon	common citrus, rhizosphere, quincy, fl, root, state of florida	2017-04-01	v4	No	1 / 950
129	amnon	common ph 6-6.5, mexico, myrtillocactus geometrizans, opuntia robusta, cactus, semi-arid, soil, root zone soil	2017-04-15	v4	No	1 / 968
480	amnon	common soil, pasture, farm, new zealand	2019-02-05	v4	No	1 / 970
548	amnon	common minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides	2019-08-15	v4	No	1 / 1040
360	amnon	lower in leaf surface compared to soil in agave plants ( high in soil compared to leaf leaf surface in desert state of california mexico guanajuato agave )	2018-08-21	v4	No	1 / 1108
259	amnon	common in soil and rhizpsphere of peanut plants (common soil, rhizosphere, ph 5, arachis hypogaea, peanut, china)	2017-12-02	v4	No	1 / 1334
98	amnon	common citrus, rhizosphere, ft. pierce, fl, root, state of florida	2017-04-01	v4	No	1 / 1340
548	amnon	common in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)	2019-08-15	v4	No	1 / 1483
76	amnon	higher in non-seleniferous soil compared to seleniferous soil ( high in non-seleniferous compared to selenium seleniferous in soil united states of america rhizosphere woodland area )	2017-02-28	v4	No	1 / 1621
101	amnon	high in root compared to rhizosphere in state of new york vitis vinifera united states of america merlot grapevine	2017-04-03	v4	No	1 / 2075
100	amnon	high in ph ph<5.5 compared to ph>5.5 in soil urban biome park new york city central park	2017-04-03	v4	No	1 / 4262

Taxonomy: d__Bacteria