Search result for sequence:
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTGCGCTAAGACCGATGTGAAATCCCCGGGCTTAACCTGGGAACTGCATTGGTGACTGGCGCGCTGGAGTATGGCAGAGGGGGGTAGAATTCCACG

Taxonomy: d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia

species # matches SILVA IDs
common ontology terms
term enrichment score
TermScore
minas gerais state0.533333
campos rupestres0.533333
vellozia epidendroides0.363636
barbacenia macrantha0.363636
calve0.307692
juvenile stage0.266667
holstein dairy cow0.266667
stem endosphere0.200000
age 35 weeks0.200000
age 140 days0.200000
hen0.181818
stem0.171429
mouth mucosa0.148148
LOWER IN digesta0.142857
ileal mucosa0.125000
age 42 days0.117647
age 70 days0.117647
root endosphere0.111111
germany0.109091
oral cavity0.108108
brazil0.096386
bos taurus0.093023
root0.090909
chicken0.080000
gallus gallus0.076923
mucosa0.068966
ileum0.062500
leaf0.057143
LOWER IN rumen0.054054
rhizosphere0.037037
caecum0.035714
plant0.034483
research facility0.024000
Fraction of dbbact annotations with this term covered by the query
TermScore
minas gerais state0.500000
campos rupestres0.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
ileal mucosa0.500000
stem endosphere0.333333
age 35 weeks0.333333
age 140 days0.333333
calve0.333333
age 42 days0.333333
age 70 days0.333333
root endosphere0.250000
hen0.250000
juvenile stage0.250000
holstein dairy cow0.250000
stem0.142857
LOWER IN digesta0.142857
mouth mucosa0.100000
root0.066667
oral cavity0.066667
germany0.062500
ileum0.055556
chicken0.055556
bos taurus0.055556
brazil0.052632
gallus gallus0.052632
leaf0.047619
mucosa0.045455
LOWER IN rumen0.043478
caecum0.023810
plant0.022727
rhizosphere0.021277
research facility0.012346
Fraction of annotations for the query sequences containing the term
TermScore
minas gerais state0.571429
campos rupestres0.571429
brazil0.571429
germany0.428571
research facility0.428571
vellozia epidendroides0.285714
barbacenia macrantha0.285714
mouth mucosa0.285714
oral cavity0.285714
juvenile stage0.285714
holstein dairy cow0.285714
calve0.285714
bos taurus0.285714
stem0.214286
rhizosphere0.142857
root0.142857
stem endosphere0.142857
LOWER IN digesta0.142857
mucosa0.142857
age 35 weeks0.142857
hen0.142857
chicken0.142857
gallus gallus0.142857
age 140 days0.142857
plant0.071429
leaf0.071429
root endosphere0.071429
ileal mucosa0.071429
ileum0.071429
caecum0.071429
LOWER IN rumen0.071429
age 42 days0.071429
age 70 days0.071429
Exp. ID User ID Description Date Region Flag Sequences
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 15
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 123
910amnoncommon age 70 days, holstein dairy cow, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 191
910amnoncommon age 42 days, holstein dairy cow, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 202
910amnoncommon mouth mucosa, oral cavity, age 140 days, holstein dairy cow, calve, germany, bos taurus, juvenile stage, research facility2022-05-20v1No1 / 245
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 431
548amnoncommon on leaf surface (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 548
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
808amnon high in mucosa compared to digesta in caecum germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 701
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
910amnon high in mouth mucosa oral cavity compared to rumen in research facility germany juvenile stage age 140 days holstein dairy cow calve bos taurus 2022-05-20v1No1 / 1194
808amnon high in ileal mucosa mucosa compared to digesta in ileum germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 1360

Problems / suggestions? Please email info AT dbbact DOT org