Summmary for taxonomy:
lachnoclostridium sp. yl32
Total dbBact sequences with taxonomy : 4

# exps # anno. Taxonomy Sequence
95163d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Clostridium XlVaTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCGAAGCAAGTCTGAAGTGAAAACCCAGGGCTCAACCCTGGGACTGCTTTGGAAACTGTTTTGCTAGAGTGTCGGAGAGGTAAGTGGAATTCCTAG
1536d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGAAAATGACGGTACCTGACTAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA
22d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Clostridium XlVaGATGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAACGAAGCGATTAAGATGAAGTTTTCGGATGGAATCTTGATTGACTGAGTGGCGGACGGGTGAGTAACGCGTGGATAACCTGCCTCACACTGGGGGATAACAGTTAGAAATGA
11d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Clostridium XlVaCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCGAAGCAAGTCTGAAGTGAAAACCCAGGGCTCAACCCTGGGACTGCTTTGGAAACTGTTTTGCTAGAGTGTCGGAGAGGTAAGTGG

Annotations for 4 sequences

common ontology terms
term enrichment score
TermScore
gastric carcinoma0.301766
stomach neoplasm0.301766
homo sapiens0.268913
feces0.261016
adult0.180504
infant0.163086
united states of america0.137699
formula fed0.130725
zhejiang province0.115645
LOWER IN control0.109371
crohn's disease0.105526
research facility0.094677
china0.091234
juvenile0.085986
mouse0.081373
mus musculus0.077396
stomach0.075110
germany0.070943
child0.070603
seattle0.068397
colonized germ free0.068397
italy0.066339
12-month-old human stage0.062343
clostridium difficile intestinal infectious disease0.061664
biopsy0.057091
hospital0.056367
LOWER IN breast fed0.055884
terminal ileum0.053809
french republic0.053198
hyplus rabbit0.052495
oryctolagus cuniculus0.051297
age 5 weeks0.050720
rabbit0.049061
caecum0.047322
control0.046293
cecal content0.046048
state of georgia0.044882
3-month-old human stage0.044677
farm0.044235
sigmoid colon0.044130
clostridium difficile infection0.044130
ulcerative colitis0.041861
c57bl/60.040893
state of california0.040596
cystic fibrosis0.040489
kingdom of spain0.039871
sus scrofa0.039014
pig0.039014
juvenile organism0.038613
canada0.038603
suckling0.035832
preweaned0.035832
age 2-4 weeks0.035832
cftr s489x0.035832
after hcst0.035832
hematopoietic stem cell transplant0.035832
valladolid0.035832
age 7 months0.035832
exclusive breastmilk diet0.035832
green turtle0.034996
chelonia mydas0.034996
remission0.034996
breast fed0.034199
wild0.033474
guangzhou city prefecture0.032867
jiangxi province0.032707
hispanic or latin american0.032259
monkey0.029614
rat0.028645
obsolete_juvenile stage0.027524
rectum0.027335
LOWER IN 1-month-old human stage0.027325
australia0.027273
antibiotic0.027003
city0.026432
taconic farms0.026432
age 8 weeks0.026432
diarrhea0.024039
captive0.023763
age < 3 years0.023754
age 3-5 weeks0.023084
finland0.022676
1-month-old human stage0.022462
equus caballus0.022173
horse0.022173
1-year-old human stage0.020235
los angeles district0.019324
colon0.019139
female0.018797
hispanic0.018605
LOWER IN weaned0.018355
LOWER IN corn and soybean diet0.018355
LOWER IN age 4-7 weeks0.018355
taipei city0.018355
low anterior resection0.018355
algonquin provincial park0.018355
peromyscus maniculatus0.018355
deer mice0.018355
before hsct0.018355
rattus rattus0.018355
Fraction of dbbact annotations with this term covered by the query
TermScore
crohn's disease5.250000
lima0.500000
glasgow0.500000
diarrhea0.500000
atlanta0.500000
acute pancreatitis0.500000
pancreatitis0.500000
atherosclerosis0.500000
cuba0.500000
los angeles district0.500000
neonate0.500000
bordeaux0.500000
juvenile0.500000
terminal ileum0.437500
age 3-5 weeks0.416667
cystic fibrosis0.416667
biopsy site0.375000
clostridium difficile intestinal infectious disease0.375000
bangladesh0.375000
ulcerative colitis0.375000
gastric carcinoma0.375000
stomach neoplasm0.375000
suckling0.375000
preweaned0.375000
age 2-4 weeks0.375000
LOWER IN weaned0.375000
LOWER IN corn and soybean diet0.375000
LOWER IN age 4-7 weeks0.375000
taipei city0.375000
low anterior resection0.375000
algonquin provincial park0.375000
peromyscus maniculatus0.375000
deer mice0.375000
seattle0.375000
cftr s489x0.375000
colonized germ free0.375000
before hsct0.375000
after hcst0.375000
hematopoietic stem cell transplant0.375000
rattus rattus0.375000
valladolid0.375000
age 7 months0.375000
LOWER IN age 7 months0.375000
adriatic sea coastal waters of italy0.375000
caretta caretta0.375000
loggerhead sea turtle0.375000
hangzhou city prefecture0.375000
age 6-14 years0.375000
hyplus rabbit0.375000
exclusive breastmilk diet0.375000
soild food supplemented diet0.375000
solid food diet0.375000
biopsy0.343750
colon0.333333
age < 3 years0.333333
state of oklahoma0.333333
sigmoid colon0.312500
clostridium difficile infection0.312500
formula fed0.312500
LOWER IN breast fed0.312500
LOWER IN 1-month-old human stage0.291667
chronic fatigue syndrome0.250000
new york county0.250000
children0.250000
mammalian milk beverage0.250000
shantytown0.250000
LOWER IN el salado0.250000
LOWER IN small village0.250000
LOWER IN plant diet0.250000
LOWER IN diarrhea0.250000
13-year-old human stage0.250000
LOWER IN bacterial vaginosis0.250000
LOWER IN ulcer0.250000
LOWER IN wound0.250000
cheyenne0.250000
native american0.250000
arapaho0.250000
epilithic0.250000
little physical activity0.250000
LOWER IN tunapuco0.250000
12-month-old human stage0.250000
nephrolithiasis0.250000
nanning city prefecture0.250000
sixth decade human stage0.250000
irritable bowel syndrome0.250000
age<17 years0.250000
spondyloarthritis0.250000
spondylitis0.250000
oslo0.250000
denver0.250000
gangcha region0.250000
LOWER IN gannan tibetan autonomous prefecture0.250000
age 1-3 weeks0.250000
hmong0.250000
LOWER IN myanmar0.250000
LOWER IN karen0.250000
low fiber0.250000
farm 10.250000
LOWER IN farm 20.250000
jinhua city prefecture0.250000
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens0.761588
feces0.651237
adult0.430924
china0.355793
LOWER IN control0.314041
gastric carcinoma0.252463
stomach neoplasm0.252463
stomach0.252463
zhejiang province0.252463
united states of america0.236253
research facility0.155653
infant0.132693
germany0.112891
formula fed0.082650
mus musculus0.079503
mouse0.079503
control0.056542
crohn's disease0.053299
juvenile0.047038
italy0.047038
child0.045909
caecum0.038075
seattle0.037630
colonized germ free0.037630
12-month-old human stage0.035612
clostridium difficile intestinal infectious disease0.033594
hospital0.033594
french republic0.033149
biopsy0.031131
farm0.031131
oryctolagus cuniculus0.030686
LOWER IN breast fed0.030686
terminal ileum0.028668
3-month-old human stage0.028223
cecal content0.028223
rabbit0.028223
age 5 weeks0.028223
hyplus rabbit0.028223
c57bl/60.027094
canada0.026649
kingdom of spain0.026204
state of georgia0.026204
state of california0.024631
sigmoid colon0.023741
sus scrofa0.023741
pig0.023741
clostridium difficile infection0.023741
ulcerative colitis0.022168
wild0.021723
juvenile organism0.021278
cystic fibrosis0.021278
suckling0.018815
preweaned0.018815
age 2-4 weeks0.018815
jiangxi province0.018815
cftr s489x0.018815
green turtle0.018815
chelonia mydas0.018815
after hcst0.018815
hematopoietic stem cell transplant0.018815
remission0.018815
valladolid0.018815
age 7 months0.018815
breast fed0.018815
exclusive breastmilk diet0.018815
guangzhou city prefecture0.018455
australia0.017242
hispanic or latin american0.017242
rat0.016797
monkey0.016797
rectum0.014779
antibiotic0.014779
city0.014779
obsolete_juvenile stage0.014779
taconic farms0.014779
age 8 weeks0.014779
LOWER IN 1-month-old human stage0.014334
captive0.014334
diarrhea0.012316
finland0.012316
age < 3 years0.012316
female0.012316
equus caballus0.012316
horse0.012316
age 3-5 weeks0.011871
1-month-old human stage0.011871
1-year-old human stage0.011078
colon0.009852
los angeles district0.009852
hispanic0.009852
colitis0.009852
LOWER IN weaned0.009408
LOWER IN corn and soybean diet0.009408
LOWER IN age 4-7 weeks0.009408
taipei city0.009408
taiwan0.009408
low anterior resection0.009408
LOWER IN research facility0.009408
LOWER IN captive0.009408
province of ontario0.009408
Exp. ID User ID Description Date Region Flag Sequences
655amnoncommon in patients after hematopoietic stem cell transplant (common feces, homo sapiens, italy, after hcst, hematopoietic stem cell transplant)2020-09-13v3No3 / 10
797amnon high in 12-month-old human stage compared to age 7 months in feces homo sapiens infant germany breast fed 2021-06-13v3No3 / 15
728amnoncommon feces, homo sapiens, hospital, adult, kingdom of spain, clostridium difficile intestinal infectious disease, clostridium difficile infection, valladolid2021-01-05v3No3 / 16
713amnondominant feces, homo sapiens, remission, crohn's disease2028-05-21v3No3 / 18
619amnondominant feces, united states of america, research facility, mus musculus, mouse, cystic fibrosis, seattle, cftr s489x, colonized germ free2020-05-04v3No3 / 20
797amnondominant feces, homo sapiens, infant, germany, formula fed, age 7 months2021-06-13v3No3 / 20
797amnondominant feces, homo sapiens, infant, germany, formula fed, 3-month-old human stage2021-06-13v3No3 / 20
728amnondominant feces, homo sapiens, hospital, adult, kingdom of spain, clostridium difficile intestinal infectious disease, clostridium difficile infection, valladolid2021-01-05v3No3 / 21
853amnondominant research facility, oryctolagus cuniculus, french republic, cecal content, rabbit, caecum, juvenile, age 5 weeks, hyplus rabbit, soild food supplemented diet, solid food diet2021-12-20v3No3 / 21
619amnondominant feces, control, united states of america, research facility, mus musculus, mouse, seattle, colonized germ free2020-05-04v3No3 / 22
655amnondominant in patients after hematopoietic stem cell transplant (dominant feces, homo sapiens, italy, after hcst, hematopoietic stem cell transplant)2020-09-13v3No3 / 22
713amnoncommon feces, homo sapiens, remission, crohn's disease2028-05-21v3No3 / 22
797amnoncommon feces, homo sapiens, infant, germany, formula fed, 12-month-old human stage2021-06-13v3No3 / 23
641amnoncommon feces, united states of america, research facility, juvenile organism, state of georgia, green turtle, chelonia mydas, juvenile2020-08-23v3No3 / 24
641amnondominant feces, united states of america, research facility, juvenile organism, state of georgia, green turtle, chelonia mydas, juvenile2020-08-23v3No3 / 24
853amnondominant research facility, caecum, oryctolagus cuniculus, french republic, cecal content, rabbit, juvenile, age 5 weeks, hyplus rabbit, exclusive breastmilk diet2021-12-20v3No3 / 24
714amnondominant homo sapiens, sigmoid colon, terminal ileum, biopsy, germany2028-05-21v3No3 / 25
385amnoncolonize probiotic supplemented mice following antibiotics treatment ( high in probiotic compared to control in feces research facility antibiotic mus musculus israel mouse )2018-10-23v4No2 / 3
655amnoncommon in patients before hematopoietic stem cell transplant (common feces, homo sapiens, italy, before hsct)2020-09-13v3No3 / 31
797amnon high in formula fed compared to breast fed in feces homo sapiens infant germany age 7 months 2021-06-13v3No3 / 31
394amnon high in ulcerative colitis compared to control in feces homo sapiens united states of america adult state of california 2018-11-06v4No2 / 8
294amnon high in irritable bowel syndrome compared to control in feces homo sapiens adult kingdom of spain 2018-02-09v4No2 / 9
797amnon high in 3-month-old human stage compared to 1-month-old human stage in feces homo sapiens infant germany formula fed 2021-06-13v3No3 / 39
629amnon high in hiv infection acquired immunodeficiency syndrome compared to control in feces homo sapiens adult kingdom of the netherlands amsterdam 2020-05-31v4No2 / 10
714amnoncommon homo sapiens, sigmoid colon, terminal ileum, biopsy, germany2028-05-21v3No3 / 40
825amnoncommon feces, homo sapiens, control, child, china, hangzhou city prefecture, age 6-14 years2021-08-12v3No3 / 40
689amnoncommon feces, homo sapiens, united states of america, hospital, adult, non c. diff diarrhea, tucson2028-03-11v4No2 / 12
502amnon high in schizophrenia compared to control in feces homo sapiens united states of america adult 2019-03-12v4No2 / 13
51amnonlower in stool compared to biopsies ( high in biopsy site biopsy compared to feces in homo sapiens united states of america )2017-01-19v4No2 / 14
185amnoncommon in patients with c. diff infection before treatment (common feces, homo sapiens, united states of america, state of minnesota, clostridium difficile intestinal infectious disease)2017-08-20v4No2 / 14
779amnon high in crohn's disease compared to control in feces homo sapiens adult guangzhou city prefecture china 2021-04-28v4No2 / 15
94amnoncommon feces, homo sapiens, state of michigan, clostridium difficile intestinal infectious disease, diarrhea2017-03-12v4No2 / 16
395amnonhigher in kids with ibd compared to healthy donors ( high in child inflammatory bowel disease crohn's disease ulcerative colitis compared to control in feces homo sapiens united states of america commonwealth of pennsylvania )2018-11-13v4No2 / 16
659amnon high in before antibiotics compared to antibiotic vancomycin metronidazole amoxicillin doxycycline in feces homo sapiens ulcerative colitis child acute severe colitis 2020-09-19v4No2 / 16
797amnoncommon feces, homo sapiens, child, germany, breast fed, 2-year-old human stage2021-06-13v3No3 / 50
368amnon high in systemic lupus erythematosus compared to control in feces homo sapiens united states of america adult commonwealth of virginia 2018-09-03v4No2 / 17
12amnon high in chronic fatigue syndrome compared to control in feces homo sapiens new york county 2016-11-02v4No2 / 18
797amnon high in infant 12-month-old human stage compared to child 2-year-old human stage in feces homo sapiens germany formula fed 2021-06-13v3No3 / 52
330amnon high in infant age 1 year compared to adult fourth decade human stage in feces homo sapiens kingdom of norway oslo 2018-05-13v4No2 / 19
689amnoncommon feces, homo sapiens, united states of america, hospital, clostridium difficile colitis, adult, clostridium difficile infection, tucson2028-03-11v4No2 / 19
866amnon high in crohn's disease crohn's disease compared to control in feces homo sapiens united states of america adult human adult stage 2022-02-08v4No2 / 19
292amnondominant feces, homo sapiens, adult, crohn's disease, china2018-02-05v4No2 / 20
24amnonappears on transition to cow milk ( high in mammalian milk beverage compared to breast milk in feces homo sapiens infant )2016-12-01v4No2 / 21
779amnondominant feces, homo sapiens, adult, guangzhou city prefecture, crohn's disease, china2021-04-28v4No2 / 21
859amnoncommon feces, homo sapiens, infant, state of california, formula fed, hispanic or latin american, los angeles district, hispanic, 6-month-old human stage2022-01-12v4No2 / 21
94amnondominant feces, homo sapiens, state of michigan, clostridium difficile intestinal infectious disease, diarrhea2017-03-12v4No2 / 22
185amnonhigh freq. in patients with c. diff infection before treatment (dominant feces, homo sapiens, united states of america, state of minnesota, clostridium difficile intestinal infectious disease)2017-08-20v4No2 / 22
689amnondominant feces, homo sapiens, united states of america, hospital, clostridium difficile colitis, adult, clostridium difficile infection, tucson2028-03-11v4No2 / 22
779amnoncommon feces, homo sapiens, adult, guangzhou city prefecture, crohn's disease, china2021-04-28v4No2 / 22
859amnondominant feces, homo sapiens, infant, state of california, formula fed, hispanic or latin american, los angeles district, hispanic, 1-month-old human stage2022-01-12v4No2 / 22
241amnoncommon in babies age < 3 years in finland (common feces, homo sapiens, infant, finland, age < 3 years)2017-11-13v4No2 / 23
779amnondominant feces, homo sapiens, ulcerative colitis, adult, guangzhou city prefecture, china2021-04-28v4No2 / 23
390amnonhigher in patients with c. diff diarrhea compared to non-c. diff diarrhea ( high in clostridium difficile intestinal infectious disease compared to non c. diff diarrhea in feces homo sapiens hospital australia diarrhea )2018-11-04v4No2 / 24
541amnonlower in koalas eating Eucalyptus obliqua leaves comapred to Eucalyptus viminalis ( high in eucalyptus viminalis eucalyptus viminalis diet compared to eucalyptus obliqua diet eucalyptus obliqua in feces australia wild phascolarctos cinereus koala cape otway )2019-08-01v4No2 / 24
619amnoncommon feces, control, united states of america, research facility, mus musculus, mouse, seattle, colonized germ free2020-05-04v3No3 / 61
395amnoncommon feces, homo sapiens, united states of america, child, commonwealth of pennsylvania, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v4No2 / 25
428amnoncommon feces, homo sapiens, adult, nanchang city prefecture, acute pancreatitis, pancreatitis, china2018-12-09v4No2 / 25
779amnoncommon feces, homo sapiens, ulcerative colitis, adult, guangzhou city prefecture, china2021-04-28v4No2 / 25
619amnoncommon feces, united states of america, research facility, cystic fibrosis, mus musculus, mouse, seattle, cftr s489x, colonized germ free2020-05-04v3No3 / 64
399amnondominant feces, united states of america, research facility, rattus norvegicus, rat2018-11-16v4No2 / 27
399amnon high in crohn's disease compared to control in feces homo sapiens united states of america 2018-11-16v4No2 / 27
797amnon high in formula fed compared to breast fed in feces homo sapiens infant germany 1-month-old human stage 2021-06-13v3No3 / 69
320amnoncommon feces, homo sapiens, adult, crohn's disease2018-04-19v4No2 / 30
390amnoncommon feces, homo sapiens, hospital, australia, clostridium difficile intestinal infectious disease, diarrhea2018-11-04v4No2 / 31
810amnoncommon in sea turtle feces from sea turtle rescue center (common feces, research facility, mediterranean sea, italy, adriatic sea coastal waters of italy, caretta caretta, loggerhead sea turtle)2021-06-22v3No3 / 72
404amnonnegatively correlated with fiber intake ( high in low fiber compared to high fiber plant fiber cell in feces homo sapiens city adult colombia )2018-11-20v4No2 / 32
797amnon high in formula fed compared to breast fed in feces homo sapiens infant germany 3-month-old human stage 2021-06-13v3No3 / 75
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in homo sapiens united states of america rectum caecum colon sigmoid colon terminal ileum biopsy children )2016-11-14v4No2 / 34
284amnon high in 12-month-old human stage compared to age 2 months in feces homo sapiens female infant state of california 2018-01-27v4No2 / 35
669amnoncommon feces, homo sapiens, infant, sweden, 12-month-old human stage2020-09-26v4No2 / 35
240amnoncommon in infants age <3 years (common feces, homo sapiens, infant, finland, age < 3 years)2017-11-12v4No2 / 36
233amnon high in age 1-year-old human stage compared to under-1-year-old human stage in feces homo sapiens united states of america infant 2017-11-05v4No2 / 37
390amnoncommon feces, homo sapiens, hospital, australia, diarrhea2018-11-04v4No2 / 38
330amnoncommon feces, homo sapiens, infant, kingdom of norway, oslo, age 1 year2018-05-13v4No2 / 39
19amnoncommon in biopsies of children (IBD study) (common homo sapiens, united states of america, rectum, caecum, colon, sigmoid colon, terminal ileum, biopsy, children)2016-11-14v4No2 / 40
859amnon high in formula fed compared to breast fed in feces homo sapiens infant state of california hispanic or latin american los angeles district hispanic 6-month-old human stage 2022-01-12v4No2 / 41
876amnon high in age 1 week neonate compared to juvenile organism age 20 months in feces united states of america research facility macaca mulatta state of washington monkey 2022-03-06v4No2 / 43
36amnoncommon feces, homo sapiens, sichuan province2016-12-06v4No2 / 44
241amnonhigher in babies from finland compared to estonia ( high in finland compared to estonia in feces homo sapiens infant age < 3 years )2017-11-13v4No2 / 45
273amnoncommon feces, homo sapiens, infant, kingdom of denmark, 1-year-old human stage2018-01-14v4No2 / 46
428amnon high in acute pancreatitis pancreatitis compared to control in feces homo sapiens adult nanchang city prefecture china 2018-12-09v4No2 / 46
591amnoncommon feces, homo sapiens, united states of america, adult, parkinson's disease, human late adulthood stage2020-02-17v4No2 / 47
779amnoncommon feces, homo sapiens, control, adult, guangzhou city prefecture, china2021-04-28v4No2 / 47
853amnoncommon research facility, caecum, oryctolagus cuniculus, french republic, cecal content, rabbit, juvenile, age 5 weeks, hyplus rabbit, exclusive breastmilk diet2021-12-20v3No3 / 96
651amnoncommon feces, homo sapiens, united states of america, adult, state of alabama, parkinson's disease2020-09-13v4No2 / 49
441amnonhigher after antibiotic treatment ( high in antibiotic cefoperazone compared to control in feces united states of america research facility mus musculus c57bl/6j mouse )2019-01-06v4No2 / 50
650amnoncommon feces, homo sapiens, united states of america, adult, african american, state of new york2020-09-09v4No2 / 52
292amnoncommon feces, homo sapiens, adult, ulcerative colitis, china2018-02-05v4No2 / 53
286amnonhigher in feces of individuals with kidney stones ( high in nephrolithiasis compared to control in feces homo sapiens adult nanning city prefecture china sixth decade human stage )2018-01-27v4No2 / 54
292amnoncommon feces, homo sapiens, adult, crohn's disease, china2018-02-05v4No2 / 55
368amnoncommon feces, homo sapiens, united states of america, adult, commonwealth of virginia, systemic lupus erythematosus2018-09-03v4No2 / 56
394amnoncommon feces, homo sapiens, united states of america, adult, state of california, ulcerative colitis2018-11-06v4No2 / 56
591amnoncommon feces, homo sapiens, control, united states of america, adult, human late adulthood stage2020-02-17v4No2 / 56
650amnon high in female compared to male in feces homo sapiens united states of america adult state of new york 2020-09-10v4No2 / 57
651amnoncommon feces, homo sapiens, control, united states of america, adult, state of alabama2020-09-13v4No2 / 58
63amnonhigher in individuals with low physical activity ( high in little physical activity compared to physical activity in feces homo sapiens united states of america )2017-12-04v4No2 / 59
502amnoncommon feces, homo sapiens, united states of america, adult, schizophrenia2019-03-12v4No2 / 63
671amnon high in age 1 month compared to 3-month-old human stage in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-28v4No2 / 64
242amnoncommon in native-americans (common feces, homo sapiens, united states of america, state of oklahoma, cheyenne, native american, arapaho)2017-11-14v4No2 / 65
448amnoncommon feces, farm, equus caballus, horse, equine grass sickness, disease, united kingdom2019-01-08v4No2 / 65
895amnoncommon feces, homo sapiens, child, french republic, cystic fibrosis, bordeaux, 6-12 year-old child stage2022-04-16v4No2 / 65
398amnon high in crohn's disease compared to control in feces homo sapiens belgium 2018-11-15v4No2 / 68
902amnoncommon feces, united states of america, colitis, antibiotic, equus caballus, horse, adult organism, colitis, antibiotics induced colitis2022-05-02v4No2 / 68
644amnon high in female compared to male in feces homo sapiens united states of america adult hispanic or latin american 2020-08-31v4No2 / 69
441amnonhigher in mice treated with indomethacin NSAID compared to non-treated controls ( high in non-steroidal anti-inflammatory drug indomethacin compared to control in feces united states of america research facility mus musculus c57bl/6j mouse )2019-01-06v4No2 / 72
448amnon high in equine grass sickness disease compared to control in feces farm equus caballus horse united kingdom 2019-01-08v4No2 / 72
541amnoncommon feces, australia, wild, phascolarctos cinereus, koala, cape otway, eucalyptus viminalis diet2019-08-01v4No2 / 72
859amnon high in 6-month-old human stage compared to 1-month-old human stage in feces homo sapiens infant state of california hispanic or latin american los angeles district hispanic 2022-01-12v4No2 / 72
438amnonhigher in kindergarten compared to primary and middle school kids ( high in age 3-6 2-5 year-old child stage compared to age 8-12 age 13-14 6-12 year-old child stage 13-year-old human stage 14-year-old human stage in feces homo sapiens china )2018-12-30v4No2 / 76
516amnoncommon feces, homo sapiens, united states of america, adult, state of ohio2019-05-29v4No2 / 77
541amnoncommon feces, australia, wild, phascolarctos cinereus, koala, cape otway, eucalyptus obliqua diet2019-08-01v4No2 / 77
644amnonlower in individuals born in latin america compared to indivuals born in usa ( high in usa born compared to non usa born in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v4No2 / 77
589amnoncommon feces, united states of america, research facility, mus musculus, c57bl/6, state of georgia, mouse, jackson laboratories, high fat diet + inulin2020-02-10v4No2 / 78
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic ampicillin neomycin compared to control in feces research facility caecum rattus norvegicus sprague dawley switzerland rat )2018-12-20v4No2 / 80
292amnoncommon feces, homo sapiens, control, adult, china2018-02-05v4No2 / 81
344amnoncommon in feces of heterosexuals (common feces, homo sapiens, united states of america, state of colorado, denver, heterosexual, msw)2018-05-31v4No2 / 82
590amnoncommon farm, intestine, age 3-5 weeks, china, hainan autonomous prefecture, trachemys scripta elegans, red-eared slider turtle, turtle farm2020-02-10v4No2 / 83
249amnoncommon feces, homo sapiens, united states of america2017-11-22v4No2 / 86
841amnoncommon feces, homo sapiens, united states of america, adult, state of texas, human adult stage2021-11-08v4No2 / 86
62amnon high in united states of america compared to egypt in feces homo sapiens child obsolete_juvenile stage 2017-02-13v4No2 / 88
582amnoncommon united states of america, rectum, wild, perianal skin, santa catalina island, urocyon littoralis, urocyon littoralis catalinae, santa catalina island fox2020-01-22v4No2 / 88
884amnoncommon feces, homo sapiens, united states of america, adult, state of california, human adult stage2022-03-24v4No2 / 88
601amnoncommon feces, homo sapiens, control, adult, china2020-03-30v4No2 / 93
521amnoncommon in pre-weaned pigs (common feces, farm, sus scrofa, jiangxi province, pig, suckling, preweaned, age 2-4 weeks, china)2019-07-02v3No3 / 169
529amnoncommon in patients that underwent low anterior resection (common feces, homo sapiens, adult, taipei city, taiwan, low anterior resection)2019-07-18v3No3 / 172
538amnon high in taconic farms compared to jackson laboratories in research facility ileum mus musculus c57bl/6 terminal ileum canada mouse age 8 weeks 2019-07-29v4No2 / 104
215amnoncommon feces, homo sapiens, united states of america2017-10-23v4No2 / 107
213amnonlower in patients with bacterial vaginosis compared to healthy controls ( high in control compared to bacterial vaginosis in homo sapiens vagina south africa )2017-10-31v4No2 / 107
538amnon high in taconic farms compared to jackson laboratories in research facility colon right colon mus musculus c57bl/6 canada mouse age 8 weeks 2019-07-29v4No2 / 108
438amnoncommon feces, homo sapiens, child, jiangsu province, age 3-6, china, 2-5 year-old child stage2018-12-30v4No2 / 109
276amnoncommon feces, homo sapiens, united states of america, city, adult, state of oklahoma2018-01-22v4No2 / 110
333amnonhigher in stroke patients compared to healthy controls ( high in stroke compared to control in feces homo sapiens adult guangzhou city prefecture china )2018-05-15v4No1 / 30
380amnon high in gangcha region compared to gannan tibetan autonomous prefecture in feces homo sapiens adult tibetan plateau tibet autonomous region 2018-10-03v4No2 / 114
239amnoncommon feces, homo sapiens, united states of america2017-11-08v4No2 / 117
409amnoncommon homo sapiens, united states of america, left colon, biopsy site, adult, biopsy2018-11-22v4No2 / 118
410amnonlower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy site biopsy compared to feces in homo sapiens united states of america child ulcerative colitis )2018-11-22v4No2 / 118
294amnoncommon feces, homo sapiens, adult, kingdom of spain, irritable bowel syndrome2018-02-09v4No2 / 120
538amnoncommon feces, research facility, mus musculus, c57bl/6, canada, mouse, taconic farms, age 8 weeks2019-07-30v4No2 / 120
438amnoncommon feces, homo sapiens, adult, jiangsu province, age >94, china, ninth decade human stage, tenth decade human stage2018-12-30v4No2 / 121
520amnonhigher in gastric cancer compared to paired normal tissue ( high in gastric carcinoma stomach neoplasm compared to control in homo sapiens stomach adult zhejiang province china )2019-06-26v3No3 / 214
538amnoncommon research facility, colon, right colon, mus musculus, c57bl/6, canada, mouse, taconic farms, age 8 weeks2019-07-30v4No2 / 130
538amnoncommon research facility, ileum, mus musculus, c57bl/6, terminal ileum, canada, mouse, taconic farms, age 8 weeks2019-07-30v4No2 / 132
438amnoncommon feces, homo sapiens, jiangsu province, age 13-14, china, 13-year-old human stage, 14-year-old human stage2018-12-30v4No2 / 134
644amnonlower in individuals born in mexico compared to cuba ( high in cuba compared to mexico in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v4No2 / 134
400amnonhigher in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in hmong china compared to myanmar karen in feces homo sapiens thailand rural community )2018-11-18v4No2 / 135
538amnon high in taconic farms compared to jackson laboratories in feces research facility mus musculus c57bl/6 canada mouse age 8 weeks 2019-07-29v4No2 / 135
10amnoncommon feces, homo sapiens, toronto2016-10-27v4No2 / 138
132amnoncommon feces, homo sapiens, united states of america2017-04-16v4No2 / 145
241amnonlower in babies from russia compared to finland ( high in finland compared to russia in feces homo sapiens infant age < 3 years )2017-11-13v4No2 / 148
74amnonHigher in animal product diet compared to plant diet ( high in diet animal product diet compared to plant diet in feces homo sapiens united states of america )2017-02-27v4No2 / 149
589amnoncommon feces, united states of america, research facility, mus musculus, low fat diet, c57bl/6, state of georgia, mouse, mouse chow, jackson laboratories2020-02-10v4No2 / 151
866amnoncommon feces, united states of america, research facility, mus musculus, c57bl/6, stress, state of illinois, mouse, restraint stress2022-02-08v4No2 / 152
333amnoncommon in stroke patient feces (common feces, homo sapiens, stroke, adult, guangzhou city prefecture, china)2018-05-15v4No1 / 53
290amnoncommon feces, homo sapiens, city, adult, china2018-02-01v4No2 / 162
297amnoncommon feces, homo sapiens, united states of america, child, atlanta, obsolete_juvenile stage, age<17 years, immature stage, adolescent stage2018-02-12v4No2 / 162
532amnon high in short bowel syndrome compared to control in feces homo sapiens adult czech republic 2019-07-21v1No1 / 57
276amnon high in united states of america city state of oklahoma compared to peru small village tunapuco rural community in feces homo sapiens adult 2018-01-22v4No2 / 168
241amnonlower in babies from russia compared to estonia ( high in estonia compared to russia in feces homo sapiens infant age < 3 years )2017-11-13v4No2 / 169
123amnon high in diet high fat diet compared to normal diet mouse chow in feces united states of america research facility mus musculus c57bl/6j mouse 2017-04-13v4No2 / 170
424amnonfarm dependent in feces of pigs with same genetic background ( high in farm 1 compared to farm 2 in feces farm sus scrofa jinhua city prefecture pig jinhua pig china )2018-12-06v4No2 / 171
589amnoncommon in high fat diet supplemented with cellulose in mice feces (common feces, united states of america, research facility, mus musculus, high fat diet, c57bl/6, state of georgia, mouse, jackson laboratories)2020-02-10v4No2 / 172
333amnoncommon in healthy controls feces (common feces, homo sapiens, control, adult, guangzhou city prefecture, china)2018-05-15v4No1 / 61
179amnoncommon united states of america, research facility, oral cavity, mus musculus, balb/c, mouse, mouth2017-08-13v4No2 / 183
399amnoncommon feces, united states of america, research facility, rattus norvegicus, rat2018-11-16v4No2 / 184
73amnonhigh in children with Crohn's disease compared to healthy adult controls ( high in child obsolete_juvenile stage crohn's disease compared to control adult in feces homo sapiens glasgow )2017-02-26v4No2 / 185
197amnon high in india compared to finland in feces homo sapiens juvenile organism obsolete_juvenile stage 13-year-old human stage 2017-09-12v4No2 / 189
389amnon high in age 1-3 weeks compared to age 4 weeks in united states of america farm tonsil sus scrofa state of michigan pig 2018-11-04v4No2 / 189
866amnoncommon feces, control, united states of america, research facility, mus musculus, c57bl/6, state of illinois, mouse2022-02-08v4No2 / 193
312amnoncommon feces, homo sapiens, adult, french republic, spondyloarthritis, spondylitis2018-04-09v4No2 / 197
120amnoncommon feces, homo sapiens, brazil2017-04-12v4No2 / 208
669amnon high in 12-month-old human stage compared to 2-month-old human stage in feces homo sapiens infant sweden 2020-09-26v4No2 / 212
521amnonhigher in pre-weaned pigs compared to weaned older timepoints ( high in suckling preweaned age 2-4 weeks compared to weaned corn and soybean diet age 4-7 weeks in feces farm sus scrofa jiangxi province pig china )2019-07-02v3No3 / 347
455amnoncommon feces, homo sapiens, adult, canada, atherosclerosis2019-01-10v4No2 / 216
671amnon high in state of california compared to state of oregon in feces united states of america research facility macaca mulatta age 1 month monkey captive rhesus macaque 2020-09-27v4No2 / 217
290amnoncommon feces, homo sapiens, adult, small village, rural community, china2018-02-01v4No2 / 218
566amnoncommon feces, homo sapiens, adult, china2019-11-24v4No2 / 221
537amnonlower in feces of deer mice grown in captivity compared to wild caught ( high in wild compared to research facility captive in feces canada province of ontario algonquin provincial park peromyscus maniculatus deer mice age 3-5 weeks )2019-07-28v3No3 / 358
902amnon high in salmonella gastroenteritis salmonellosis compared to control in feces united states of america equus caballus horse adult organism 2022-05-02v4No2 / 226
310amnoncommon feces, homo sapiens, female, rectum, adult, poland2018-04-07v4No2 / 227
25amnon high in antibiotic compared to control in research facility caecum oryctolagus cuniculus rex rabbit sichuan province 2016-12-01v4No2 / 231
53amnon high in lima shantytown compared to el salado small village in feces homo sapiens city 2017-01-21v4No2 / 236
286amnoncommon in feces of individuals with kidney stones (common feces, homo sapiens, adult, nanning city prefecture, nephrolithiasis, china, sixth decade human stage)2018-01-27v4No2 / 239
666amnoncommon feces, italy, rat, rattus rattus2020-09-25v3No3 / 406
121amnonlow in diarrhea compared to recovery period ( high in control compared to diarrhea in feces homo sapiens adult bangladesh )2017-04-13v4No2 / 263
286amnoncommon in feces of individuals without kidney stones (common feces, homo sapiens, control, adult, nanning city prefecture, china, sixth decade human stage)2018-01-27v4No2 / 281
477amnon high in united states of america compared to nepal himalayas rural community in feces homo sapiens adult 2019-01-28v4No2 / 295
683amnonlower in antibiotic treatment (combined 3 antibiotics) compared to pre-treatment ( high in control compared to antibiotic vancomycin metronidazole neomycin in feces homo sapiens united states of america adult state of california )2028-03-04v4No2 / 301
299amnon high in mouth neoplasm cancer compared to control in homo sapiens saliva adult china 2018-02-27v4No2 / 319
400amnonlower in people from thailand compared to 2nd generation immigrants to usa ( high in united states of america compared to thailand rural community in feces homo sapiens )2018-11-18v4No2 / 343
902amnon high in colitis antibiotic colitis antibiotics induced colitis compared to control in feces united states of america equus caballus horse adult organism 2022-05-02v4No2 / 364
62amnoncommon feces, homo sapiens, united states of america, child, obsolete_juvenile stage2017-02-13v4No2 / 373
63amnon high in female compared to male in feces homo sapiens united states of america 2017-12-04v4No2 / 384
582amnon high in rectum perianal skin compared to external acoustic meatus ear canal in united states of america wild santa catalina island urocyon littoralis urocyon littoralis catalinae santa catalina island fox 2020-01-22v4No2 / 400
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in feces homo sapiens )2018-09-06v4No2 / 417
729amnon high in zoological garden captive europe compared to wild cameroon in feces gorilla gorilla monkey 2021-01-05v3No3 / 656
62amnoncommon feces, homo sapiens, child, egypt, obsolete_juvenile stage2017-02-13v4No2 / 422
438amnonhigher in centenarians compared to adults ( high in age >94 ninth decade human stage tenth decade human stage compared to 65-79 year-old human stage fourth decade human stage fifth decade human stage in feces homo sapiens china )2018-12-30v4No2 / 474
650amnon high in caucasian european compared to asian in feces homo sapiens united states of america adult state of new york 2020-09-12v4No2 / 475
657amnoncommon research facility, rumen, ovis aries, qinghai province, rumen liquid, age < 1 year, sheep, lamb, china2020-09-13v4No2 / 517
273amnon high in age 1-year-old human stage compared to 1-month-old human stage in feces homo sapiens infant kingdom of denmark 2018-01-14v4No2 / 557
240amnonlower in infants age<1 year compared to 1-3 years in baby feces ( high in age 1-year-old human stage compared to under-1-year-old human stage in feces homo sapiens infant finland )2017-11-12v4No2 / 567
372amnon high in mouse chow compared to high fat diet in feces united states of america research facility mus musculus mouse 2018-09-07v4No2 / 579
891amnon high in 1-year-old human stage compared to under-1-year-old human stage in feces homo sapiens infant bangladesh dhaka infant stage urban slum 2022-04-03v4No1 / 363
847amnon high in eleventh decade human stage centenarian human stage compared to ninth decade human stage in feces japan 80 year-old and over human stage 2021-12-01v1No1 / 387
232amnonlower in diabetec foot ulcers compared to non-ulcer skin in diabetic patients ( high in control compared to ulcer wound in homo sapiens skin foot australia diabetes mellitus )2017-11-05v4No2 / 836
252amnoncommon in river rock biofilm (common river, rock, biofilm, kingdom of spain, epilithic, biofilm)2017-11-22v4No2 / 1081

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