Summmary for taxonomy:
selenomonas bovis
Total dbBact sequences with taxonomy : 3

Annotations for 3 sequences

common ontology terms
term enrichment score
TermScore
sus scrofa0.280078
pig0.280078
LOWER IN first pregnancy0.222222
multiple pregnancies0.222222
bos taurus0.216953
rumen0.199711
female organism0.194274
holstein-friesian bull0.193760
ireland0.176166
holstein dairy cow0.171821
state of mississippi0.171821
pregnancy0.165835
commonwealth of pennsylvania0.160940
cow0.153879
adult organism0.121751
state of nebraska0.120944
ruminal fluid0.104493
LOWER IN restricted diet0.098619
LOWER IN low milk yield0.098619
high milk yield0.098619
LOWER IN jersey cow0.098619
LOWER IN multiple pregnancies0.098619
first pregnancy0.098619
normal diet0.080710
state of tennessee0.080710
shandong province0.080710
rumen liquid0.080710
corn diet0.060606
40mdgs diet0.060606
LOWER IN 27cds diet0.060606
LOWER IN 55cs diet0.060606
zoological garden0.050277
diet0.045938
farm0.037736
660 days0.037037
LOWER IN 605 days0.037037
jinhua city prefecture0.037037
jinhua pig0.037037
farm 20.037037
LOWER IN farm 10.037037
age 100 days0.037037
duroc pig0.037037
early pregnancy0.037037
province of quebec0.035088
nanchang city prefecture0.035088
age 140 days0.035088
LOWER IN left colon0.033333
lamb0.033333
research facility0.032052
LOWER IN right colon0.031746
jejunum0.028986
belgium0.027778
male organism0.025641
sheep0.024691
duodenum0.022989
ovis aries0.022989
united states of america0.022778
crohn's disease0.022222
LOWER IN female organism0.022222
ileum0.019608
age0.018018
feces0.017122
united kingdom0.016667
canada0.014493
china0.013441
child0.012121
LOWER IN caecum0.011494
male0.011111
female0.008130
LOWER IN female0.008130
control0.006616
LOWER IN feces0.003740
adult0.003300
LOWER IN control0.003236
homo sapiens0.002186
Fraction of dbbact annotations with this term covered by the query
TermScore
holstein-friesian bull0.333333
LOWER IN restricted diet0.333333
LOWER IN low milk yield0.333333
high milk yield0.333333
holstein dairy cow0.333333
LOWER IN jersey cow0.333333
state of mississippi0.333333
LOWER IN multiple pregnancies0.333333
first pregnancy0.333333
ireland0.200000
sus scrofa0.187500
pig0.187500
660 days0.166667
LOWER IN 605 days0.166667
state of nebraska0.166667
jinhua city prefecture0.166667
jinhua pig0.166667
farm 20.166667
LOWER IN farm 10.166667
age 100 days0.166667
duroc pig0.166667
early pregnancy0.166667
corn diet0.166667
40mdgs diet0.166667
LOWER IN 27cds diet0.166667
LOWER IN 55cs diet0.166667
LOWER IN first pregnancy0.166667
multiple pregnancies0.166667
bos taurus0.148148
normal diet0.133333
state of tennessee0.133333
shandong province0.133333
rumen liquid0.133333
rumen0.130435
cow0.121212
female organism0.119048
province of quebec0.111111
nanchang city prefecture0.111111
age 140 days0.111111
pregnancy0.102564
commonwealth of pennsylvania0.100000
ruminal fluid0.095238
LOWER IN left colon0.083333
lamb0.083333
adult organism0.071429
LOWER IN right colon0.066667
jejunum0.047619
zoological garden0.044444
belgium0.041667
male organism0.033333
diet0.030303
sheep0.030303
farm0.027027
duodenum0.025641
ovis aries0.025641
crohn's disease0.023810
LOWER IN female organism0.023810
ileum0.018519
research facility0.016461
age0.015873
united kingdom0.013889
united states of america0.011583
canada0.011111
feces0.008696
child0.008547
LOWER IN caecum0.007937
male0.007576
china0.007207
female0.005051
LOWER IN female0.005051
control0.003509
LOWER IN feces0.001932
adult0.001792
LOWER IN control0.001754
homo sapiens0.001153
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.680556
research facility0.606481
sus scrofa0.553241
pig0.553241
feces0.553241
female organism0.527778
pregnancy0.432870
rumen0.425926
commonwealth of pennsylvania0.412037
adult organism0.412037
bos taurus0.405093
LOWER IN first pregnancy0.333333
multiple pregnancies0.333333
cow0.210648
ireland0.157407
holstein-friesian bull0.136574
holstein dairy cow0.115741
ruminal fluid0.115741
state of mississippi0.115741
china0.099537
diet0.094907
state of nebraska0.094907
farm0.062500
control0.057870
LOWER IN restricted diet0.057870
normal diet0.057870
zoological garden0.057870
state of tennessee0.057870
LOWER IN low milk yield0.057870
high milk yield0.057870
shandong province0.057870
rumen liquid0.057870
LOWER IN jersey cow0.057870
LOWER IN feces0.057870
LOWER IN multiple pregnancies0.057870
first pregnancy0.057870
corn diet0.037037
40mdgs diet0.037037
LOWER IN 27cds diet0.037037
LOWER IN 55cs diet0.037037
age0.020833
660 days0.020833
LOWER IN 605 days0.020833
duodenum0.020833
jejunum0.020833
ileum0.020833
LOWER IN caecum0.020833
LOWER IN right colon0.020833
LOWER IN left colon0.020833
united kingdom0.020833
homo sapiens0.020833
belgium0.020833
LOWER IN control0.020833
crohn's disease0.020833
jinhua city prefecture0.020833
jinhua pig0.020833
farm 20.020833
LOWER IN farm 10.020833
canada0.020833
province of quebec0.020833
female0.020833
adult0.020833
ovis aries0.020833
sheep0.020833
lamb0.020833
child0.020833
age 100 days0.020833
LOWER IN female0.020833
LOWER IN female organism0.020833
male organism0.020833
male0.020833
nanchang city prefecture0.020833
age 140 days0.020833
duroc pig0.020833
early pregnancy0.020833
Exp. ID User ID Description Date Region Flag Sequences
687amnon high in high milk yield compared to low milk yield in holstein dairy cow bos taurus shandong province research facility china rumen liquid rumen 2028-03-09v4No2 / 40
688amnon high in male organism male compared to female female organism in nanchang city prefecture feces age 140 days research facility duroc pig china pig sus scrofa 2028-03-09v4No1 / 39
398amnon high in crohn's disease compared to control in homo sapiens feces belgium 2018-11-15v4No1 / 68
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 105
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No2 / 266
399amnoncommon feces, united states of america, zoological garden, state of tennessee, sus scrofa, pig2018-11-16v4No2 / 319
424amnonfarm dependent in feces of pigs with same genetic background ( high in farm 2 compared to farm 1 in sus scrofa pig jinhua city prefecture jinhua pig feces farm china )2018-12-06v4No1 / 136
816amnonhigher in sows in first pregnancy compared to later pregnancies ( high in first pregnancy compared to multiple pregnancies in commonwealth of pennsylvania pregnancy feces adult organism research facility united states of america female organism sus scrofa pig )2021-07-04v4No2 / 374
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
748amnon high in holstein dairy cow compared to jersey cow in ruminal fluid rumen united states of america state of mississippi research facility female organism bos taurus cow 2021-03-10v4No2 / 638
816amnoncommon early pregnancy, commonwealth of pennsylvania, pregnancy, feces, adult organism, research facility, united states of america, female organism, sus scrofa, pig2021-07-04v4No1 / 313
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No2 / 757
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
470amnoncommon sus scrofa, pig, canada, farm, province of quebec, feces, female, adult, pregnancy2019-01-14v4No1 / 457
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No2 / 1023
816amnonlower in sows in first pregnancy compared to later pregnancies ( high in multiple pregnancies compared to first pregnancy in commonwealth of pennsylvania pregnancy feces adult organism research facility united states of america female organism sus scrofa pig )2021-07-04v4No1 / 780
748amnon high in ruminal fluid rumen compared to feces in united states of america state of mississippi research facility female organism bos taurus cow 2021-03-10v4No2 / 2716

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