dbBact

Experiment ID: 1001

Field	Description
name	nasopharyngeal microbial communities of patients infected with sars-cov-2 that developed covid-19
sra	prjna673585
doi	https://doi.org/10.3389/fmicb.2021.637430
datamd5	3003f8eed66ada2cebbef195c4875c7d
mapmd5	194dacb059fef82151c113012bc72570

Annotations for experiment:

term enrichment score

Term	Score
province of alicante	0.666667
nasal swab	0.666667
nasal cavity	0.133333
kingdom of spain	0.076923
adult	0.008264
homo sapiens	0.005277

Fraction of dbbact annotations with this term covered by the query

Term	Score
province of alicante	0.500000
nasal swab	0.500000
nasal cavity	0.071429
kingdom of spain	0.040000
adult	0.004149
homo sapiens	0.002646

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
nasal cavity	1.000000
adult	1.000000
kingdom of spain	1.000000
province of alicante	1.000000
nasal swab	1.000000

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
nasal cavity	1.000000
adult	1.000000
kingdom of spain	1.000000
province of alicante	1.000000
nasal swab	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
1001	amnon	dominant in covid-19 test nasal swabs (dominant homo sapiens, nasal cavity, adult, kingdom of spain, province of alicante, nasal swab)	2022-12-31	v3	1 / 18	approved	No
1001	amnon	common in covid-19 test nasal swabs (common homo sapiens, nasal cavity, adult, kingdom of spain, province of alicante, nasal swab)	2022-12-31	v3	1 / 32	approved	No

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