Experiment ID: 1033

Field Description
namesalivary microbiome profiles of oral cancer patients analyzed before and after treatment
sraprjna997108
doihttps://doi.org/10.1186/s40168-023-01613-y
datamd53dd470b560f51072ae53cab1d77e00b8
mapmd58faf17b0ba145e9ac0e1257649f40267

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN lip and oral cavity carcinoma0.500000
LOWER IN oral squamous cell carcinoma0.500000
lip and oral cavity carcinoma0.500000
oral squamous cell carcinoma0.500000
LOWER IN after therapy0.500000
after therapy0.500000
helsinki0.333333
stimulated saliva0.333333
before therapy0.333333
LOWER IN before therapy0.333333
LOWER IN nicotine dependence0.250000
LOWER IN smoker0.250000
nicotine dependence0.200000
smoker0.200000
LOWER IN cigarette smoking0.200000
cigarette smoking0.166667
LOWER IN non-smoker0.166667
non-smoker0.166667
finland0.100000
human late adulthood stage0.066667
saliva0.016129
LOWER IN control0.004762
control0.004651
adult0.004292
homo sapiens0.002747
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
saliva1.000000
adult1.000000
finland1.000000
helsinki1.000000
human late adulthood stage1.000000
stimulated saliva1.000000
lip and oral cavity carcinoma0.375000
oral squamous cell carcinoma0.375000
nicotine dependence0.125000
smoker0.125000
cigarette smoking0.125000
LOWER IN non-smoker0.125000
non-smoker0.125000
LOWER IN nicotine dependence0.125000
LOWER IN smoker0.125000
LOWER IN cigarette smoking0.125000
control0.125000
LOWER IN lip and oral cavity carcinoma0.125000
LOWER IN oral squamous cell carcinoma0.125000
LOWER IN control0.125000
before therapy0.125000
LOWER IN after therapy0.125000
after therapy0.125000
LOWER IN before therapy0.125000
Exp. ID User ID Description Date Region Sequences Status Flag
1033amnonlower before surgical resection and adjuvant therapy compared to after therapy in human saliva of oral cancer patients ( high in after therapy compared to before therapy in homo sapiens saliva adult finland lip and oral cavity carcinoma oral squamous cell carcinoma helsinki human late adulthood stage stimulated saliva )2023-08-14v41 / 4pendingNo
1033amnonhigher before surgical resection and adjuvant therapy compared to after therapy in human saliva of oral cancer patients ( high in before therapy compared to after therapy in homo sapiens saliva adult finland lip and oral cavity carcinoma oral squamous cell carcinoma helsinki human late adulthood stage stimulated saliva )2023-08-14v41 / 6pendingNo
1033amnon high in lip and oral cavity carcinoma oral squamous cell carcinoma compared to control in homo sapiens saliva adult finland helsinki human late adulthood stage stimulated saliva 2023-08-14v41 / 14pendingNo
1033amnondominant homo sapiens, saliva, adult, finland, helsinki, human late adulthood stage, stimulated saliva2023-08-14v41 / 22pendingNo
1033amnon high in control compared to lip and oral cavity carcinoma oral squamous cell carcinoma in homo sapiens saliva adult finland helsinki human late adulthood stage stimulated saliva 2023-08-14v41 / 25pendingNo
1033amnon high in non-smoker compared to nicotine dependence smoker cigarette smoking in homo sapiens saliva adult finland helsinki human late adulthood stage stimulated saliva 2023-08-14v41 / 30pendingNo
1033amnoncommon homo sapiens, saliva, adult, finland, helsinki, human late adulthood stage, stimulated saliva2023-08-14v41 / 66pendingNo
1033amnon high in nicotine dependence smoker cigarette smoking compared to non-smoker in homo sapiens saliva adult finland helsinki human late adulthood stage stimulated saliva 2023-08-14v41 / 95pendingNo

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