dbBact

Experiment ID: 1044

Field	Description
name	comprehensive analysis of gut microbiota of a healthy population and covariates affecting microbial variation in two large japanese cohorts
sra	prjdb10527
sra	prjdb10530
sra	prjdb10529
sra	prjdb10526
sra	prjdb10528
doi	https://doi.org/10.1186/s12866-021-02215-0
datamd5	3ddaabef4ea3df05b5fa3ca1a1a44ba5
mapmd5	3557f9c529a530059cdc4c1acf51d467

Annotations for experiment:

term enrichment score

Term	Score
LOWER IN human early adulthood stage	0.181818
LOWER IN human late adulthood stage	0.153846
human late adulthood stage	0.111111
human early adulthood stage	0.100000
japan	0.080000
human adult stage	0.074074
LOWER IN male	0.064516
LOWER IN female	0.058824
male	0.037037
female	0.024390
adult	0.009050
homo sapiens	0.005747
feces	0.004914

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN human early adulthood stage	0.200000
LOWER IN human late adulthood stage	0.142857
human late adulthood stage	0.083333
human early adulthood stage	0.071429
japan	0.041667
LOWER IN male	0.040000
human adult stage	0.038462
LOWER IN female	0.035714
male	0.020833
female	0.013158
adult	0.004545
homo sapiens	0.002882
feces	0.002463

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
japan	1.000000
human adult stage	1.000000
human early adulthood stage	0.166667
LOWER IN human late adulthood stage	0.166667
human late adulthood stage	0.166667
LOWER IN human early adulthood stage	0.166667
female	0.166667
LOWER IN male	0.166667
male	0.166667
LOWER IN female	0.166667

Number of experiments associating the term to the sequence

Term	Score
human early adulthood stage	1.000000
LOWER IN human late adulthood stage	1.000000
feces	1.000000
homo sapiens	1.000000
adult	1.000000
japan	1.000000
human adult stage	1.000000
human late adulthood stage	1.000000
LOWER IN human early adulthood stage	1.000000
female	1.000000
LOWER IN male	1.000000
male	1.000000
LOWER IN female	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
1044	amnon	dominant feces, homo sapiens, adult, japan, human adult stage	2023-08-20	v3	1 / 22	pending	No
1044	amnon	common feces, homo sapiens, adult, japan, human adult stage	2023-08-20	v3	1 / 39	pending	No
1044	amnon	high in male compared to female in feces homo sapiens adult japan human adult stage	2023-08-20	v3	1 / 59	pending	No
1044	amnon	high in female compared to male in feces homo sapiens adult japan human adult stage	2023-08-20	v3	1 / 123	pending	No
1044	amnon	high in human late adulthood stage compared to human early adulthood stage in feces homo sapiens adult japan human adult stage	2023-08-20	v3	1 / 161	pending	No
1044	amnon	high in human early adulthood stage compared to human late adulthood stage in feces homo sapiens adult japan human adult stage	2023-08-20	v3	1 / 177	pending	No

Problems / suggestions? Please visit the dbBact forum