Experiment ID: 108

Field Description
nameunique and shared responses of the gut microbiota to prolonged fasting: a comparative study across five classes of vertebrate hosts
srasrp041217
pubmedprjna244306
datamd51e6036e3830fa6d2dd33146adaa9e236
mapmd52e210df4fede28f696a4747455917709

Annotations for experiment:

term enrichment score
TermScore
nile tilapia0.384615
quail0.360000
coturnix coturnix0.360000
oreochromis niloticus0.322581
fasting0.193548
state of texas0.181818
LOWER IN fasting0.175439
late timepoints0.162162
LOWER IN early timepoints0.162162
anaxyrus terrestris0.157895
southern toad0.157895
early timepoints0.129870
LOWER IN late timepoints0.129870
colon0.080378
LOWER IN colon0.069767
LOWER IN caecum0.067416
caecum0.038363
mouse0.028902
mus musculus0.026247
research facility0.010471
united states of america0.006689
Fraction of dbbact annotations with this term covered by the query
TermScore
quail0.500000
coturnix coturnix0.500000
anaxyrus terrestris0.500000
southern toad0.500000
nile tilapia0.500000
oreochromis niloticus0.333333
LOWER IN fasting0.200000
fasting0.200000
late timepoints0.142857
LOWER IN early timepoints0.142857
early timepoints0.111111
LOWER IN late timepoints0.111111
state of texas0.100000
LOWER IN colon0.055556
LOWER IN caecum0.052632
colon0.043478
caecum0.020000
mouse0.015152
mus musculus0.013699
research facility0.005263
united states of america0.003356
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
research facility1.000000
state of texas1.000000
colon0.531250
caecum0.468750
mus musculus0.312500
mouse0.312500
oreochromis niloticus0.312500
nile tilapia0.312500
quail0.281250
coturnix coturnix0.281250
fasting0.187500
late timepoints0.187500
LOWER IN early timepoints0.187500
early timepoints0.156250
LOWER IN fasting0.156250
LOWER IN late timepoints0.156250
LOWER IN colon0.093750
LOWER IN caecum0.093750
anaxyrus terrestris0.093750
southern toad0.093750
Number of experiments associating the term to the sequence
TermScore
caecum1.000000
LOWER IN colon1.000000
united states of america1.000000
research facility1.000000
state of texas1.000000
quail1.000000
coturnix coturnix1.000000
mus musculus1.000000
mouse1.000000
colon1.000000
LOWER IN caecum1.000000
anaxyrus terrestris1.000000
southern toad1.000000
early timepoints1.000000
LOWER IN fasting1.000000
LOWER IN late timepoints1.000000
oreochromis niloticus1.000000
nile tilapia1.000000
fasting1.000000
late timepoints1.000000
LOWER IN early timepoints1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
108amnonquail mitochondria (other united states of america, research facility, colon, state of texas, quail, coturnix coturnix)2017-04-07v41 / 1approvedNo
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in united states of america research facility colon oreochromis niloticus state of texas nile tilapia )2017-04-07v41 / 4approvedNo
108amnondominant united states of america, research facility, colon, oreochromis niloticus, state of texas, nile tilapia2017-04-07v41 / 6approvedNo
108amnondominant united states of america, research facility, colon, state of texas, quail, coturnix coturnix2017-04-07v41 / 6approvedNo
108amnondominant united states of america, research facility, caecum, oreochromis niloticus, state of texas, nile tilapia2017-04-07v41 / 9approvedNo
108amnoncommon united states of america, research facility, caecum, oreochromis niloticus, state of texas, nile tilapia2017-04-07v41 / 12approvedNo
108amnon high in colon compared to caecum in united states of america research facility mus musculus state of texas mouse 2017-04-07v41 / 13approvedNo
108amnondominant united states of america, research facility, colon, state of texas, anaxyrus terrestris, southern toad2017-04-07v41 / 16approvedNo
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum oreochromis niloticus state of texas nile tilapia )2017-04-07v41 / 17approvedNo
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum mus musculus state of texas mouse )2017-04-07v41 / 19approvedNo
108amnondominant united states of america, research facility, caecum, mus musculus, state of texas, mouse2017-04-07v41 / 21approvedNo
108amnondominant united states of america, research facility, caecum, state of texas, quail, coturnix coturnix2017-04-07v41 / 21approvedNo
108amnondominant united states of america, research facility, colon, mus musculus, state of texas, mouse2017-04-07v41 / 25approvedNo
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum mus musculus state of texas mouse )2017-04-07v41 / 29approvedNo
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in united states of america research facility colon mus musculus state of texas mouse )2017-04-07v41 / 31approvedNo
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum state of texas quail coturnix coturnix )2017-04-07v41 / 33approvedNo
108amnoncommon united states of america, research facility, colon, state of texas, quail, coturnix coturnix2017-04-07v41 / 35approvedNo
108amnoncommon united states of america, research facility, colon, oreochromis niloticus, state of texas, nile tilapia2017-04-07v41 / 43approvedNo
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in united states of america research facility colon state of texas anaxyrus terrestris southern toad )2017-04-07v41 / 45approvedNo
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in united states of america research facility colon mus musculus state of texas mouse )2017-04-07v41 / 59approvedNo
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum state of texas quail coturnix coturnix )2017-04-07v41 / 76approvedNo
108amnon high in caecum compared to colon in united states of america research facility oreochromis niloticus state of texas nile tilapia 2017-04-07v41 / 80approvedNo
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in united states of america research facility colon oreochromis niloticus state of texas nile tilapia )2017-04-07v41 / 81approvedNo
108amnon high in caecum compared to colon in united states of america research facility mus musculus state of texas mouse 2017-04-07v41 / 86approvedNo
108amnon high in colon compared to caecum in united states of america research facility oreochromis niloticus state of texas nile tilapia 2017-04-07v41 / 103approvedNo
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum oreochromis niloticus state of texas nile tilapia )2017-04-07v41 / 122approvedNo
108amnoncommon united states of america, research facility, colon, state of texas, anaxyrus terrestris, southern toad2017-04-07v41 / 132approvedNo
108amnon high in colon compared to caecum in united states of america research facility state of texas quail coturnix coturnix 2017-04-07v41 / 157approvedNo
108amnoncommon united states of america, research facility, colon, mus musculus, state of texas, mouse2017-04-07v41 / 158approvedNo
108amnoncommon united states of america, research facility, caecum, state of texas, quail, coturnix coturnix2017-04-07v41 / 216approvedNo
108amnoncommon united states of america, research facility, caecum, mus musculus, state of texas, mouse2017-04-07v41 / 241approvedNo
108amnon high in caecum compared to colon in united states of america research facility state of texas quail coturnix coturnix 2017-04-07v41 / 380approvedNo

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