Experiment ID: 114

Field Description
namelarval exposure to polychlorinated biphenyl 126 (pcb-126) causes persistent alteration of the amphibian gut microbiota
srasrp019766
srasrp019766
datamd53839cd213e2b07ada0f9e0f585522102
mapmd55ed831e48c845d091eaec3bccab959f2

Annotations for experiment:

term enrichment score
TermScore
rana pipiens0.666667
northern leopard frog0.666667
state of wisconsin0.333333
tadpole0.263158
digesta0.250000
contaminated water0.200000
polychlorinated biphenyl 1260.200000
pcb0.200000
LOWER IN contaminated water0.200000
LOWER IN polychlorinated biphenyl 1260.200000
LOWER IN pcb0.200000
LOWER IN tadpole0.153846
intestine0.064516
LOWER IN adult0.060606
research facility0.010870
LOWER IN control0.009434
control0.009174
adult0.008982
united states of america0.006944
Fraction of dbbact annotations with this term covered by the query
TermScore
rana pipiens0.500000
northern leopard frog0.500000
contaminated water0.500000
polychlorinated biphenyl 1260.500000
pcb0.500000
LOWER IN contaminated water0.500000
LOWER IN polychlorinated biphenyl 1260.500000
LOWER IN pcb0.500000
state of wisconsin0.200000
LOWER IN tadpole0.200000
tadpole0.166667
digesta0.142857
LOWER IN adult0.040000
intestine0.033333
research facility0.005464
LOWER IN control0.004902
control0.004762
adult0.004545
united states of america0.003484
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
research facility1.000000
intestine1.000000
state of wisconsin1.000000
digesta1.000000
rana pipiens1.000000
northern leopard frog1.000000
tadpole0.625000
adult0.375000
LOWER IN adult0.125000
LOWER IN tadpole0.125000
contaminated water0.125000
polychlorinated biphenyl 1260.125000
pcb0.125000
LOWER IN control0.125000
control0.125000
LOWER IN contaminated water0.125000
LOWER IN polychlorinated biphenyl 1260.125000
LOWER IN pcb0.125000
Number of experiments associating the term to the sequence
TermScore
tadpole1.000000
LOWER IN adult1.000000
united states of america1.000000
research facility1.000000
intestine1.000000
state of wisconsin1.000000
digesta1.000000
rana pipiens1.000000
northern leopard frog1.000000
adult1.000000
LOWER IN tadpole1.000000
contaminated water1.000000
polychlorinated biphenyl 1261.000000
pcb1.000000
LOWER IN control1.000000
control1.000000
LOWER IN contaminated water1.000000
LOWER IN polychlorinated biphenyl 1261.000000
LOWER IN pcb1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
114amnondominant united states of america, research facility, intestine, adult, state of wisconsin, digesta, rana pipiens, northern leopard frog2017-04-10v41 / 1approvedNo
114amnon high in control compared to contaminated water polychlorinated biphenyl 126 pcb in united states of america research facility intestine tadpole state of wisconsin digesta rana pipiens northern leopard frog 2017-04-10v41 / 1approvedNo
114amnon high in contaminated water polychlorinated biphenyl 126 pcb compared to control in united states of america research facility intestine tadpole state of wisconsin digesta rana pipiens northern leopard frog 2017-04-10v41 / 2approvedNo
114amnondominant united states of america, research facility, intestine, tadpole, state of wisconsin, digesta, rana pipiens, northern leopard frog2017-04-10v41 / 26approvedNo
114amnon high in adult compared to tadpole in united states of america research facility intestine state of wisconsin digesta rana pipiens northern leopard frog 2017-04-10v41 / 67approvedNo
114amnoncommon united states of america, research facility, intestine, adult, state of wisconsin, digesta, rana pipiens, northern leopard frog2017-04-10v41 / 72approvedNo
114amnoncommon united states of america, research facility, intestine, tadpole, state of wisconsin, digesta, rana pipiens, northern leopard frog2017-04-10v41 / 84approvedNo
114amnon high in tadpole compared to adult in united states of america research facility intestine state of wisconsin digesta rana pipiens northern leopard frog 2017-04-10v41 / 90approvedNo

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