dbBact

Experiment ID: 123

Field	Description
name	the antipsychotic olanzapine interacts with the gut microbiome to cause weight gain in mouse
sra	srp049294
sra	prjna264871
datamd5	4e44e709fb87b2cfcd714cd266be8d87
mapmd5	23e992baf271afa7225cbfdddacba4d4

Annotations for experiment:

term enrichment score

Term	Score
regular mouse chow	0.285714
olanzapine	0.285714
normal diet	0.166667
LOWER IN normal diet	0.166667
c57bl/6j	0.153846
LOWER IN high fat diet	0.105263
high fat diet	0.100000
LOWER IN mouse chow	0.090909
diet	0.075472
mouse	0.029851
mus musculus	0.027027
research facility	0.010471
LOWER IN control	0.009091
united states of america	0.006689
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
regular mouse chow	0.500000
olanzapine	0.500000
normal diet	0.142857
LOWER IN normal diet	0.142857
c57bl/6j	0.083333
LOWER IN high fat diet	0.071429
high fat diet	0.066667
LOWER IN mouse chow	0.058824
diet	0.041667
mouse	0.015152
mus musculus	0.013699
research facility	0.005263
LOWER IN control	0.004651
united states of america	0.003356
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
united states of america	1.000000
research facility	1.000000
mus musculus	1.000000
c57bl/6j	1.000000
mouse	1.000000
diet	0.400000
normal diet	0.200000
regular mouse chow	0.200000
LOWER IN high fat diet	0.200000
high fat diet	0.200000
LOWER IN normal diet	0.200000
LOWER IN mouse chow	0.200000
olanzapine	0.200000
LOWER IN control	0.200000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
united states of america	1.000000
research facility	1.000000
mus musculus	1.000000
c57bl/6j	1.000000
mouse	1.000000
diet	1.000000
normal diet	1.000000
regular mouse chow	1.000000
LOWER IN high fat diet	1.000000
high fat diet	1.000000
LOWER IN normal diet	1.000000
LOWER IN mouse chow	1.000000
olanzapine	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
123	amnon	high in olanzapine compared to control in feces united states of america research facility mus musculus c57bl/6j mouse	2017-04-13	v4	1 / 2	approved	No
123	amnon	dominant feces, united states of america, research facility, mus musculus, c57bl/6j, mouse	2017-04-13	v4	1 / 12	approved	No
123	amnon	high in diet high fat diet compared to normal diet mouse chow in feces united states of america research facility mus musculus c57bl/6j mouse	2017-04-13	v4	1 / 170	approved	No
123	amnon	high in diet normal diet regular mouse chow compared to high fat diet in feces united states of america research facility mus musculus c57bl/6j mouse	2017-04-13	v4	1 / 209	approved	No
123	amnon	common feces, united states of america, research facility, mus musculus, c57bl/6j, mouse	2017-04-13	v4	1 / 325	approved	No

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