dbBact

Experiment ID: 139

Field	Description
name	polymetallic nodules, sediments, and deep waters in the equatorial north pacific exhibit highly diverse and distinct bacterial, archaeal, and microeukaryotic communities
sra	srp057408
sra	prjna281530
datamd5	d0a984c7db194eb3e8a50e91b13bd308
mapmd5	777d28a8df78cc68a0fd50e53c7566f6

Annotations for experiment:

term enrichment score

Term	Score
depth (water) 4000m	0.500000
polymetallic nodule	0.500000
LOWER IN polymetallic nodule	0.250000
LOWER IN depth 8-10cm	0.250000
depth 0-5cm	0.222222
sediment depth 8-10cm	0.222222
LOWER IN sediment depth 0-5cm	0.200000
LOWER IN marine sediment	0.153846
marine sediment	0.099010
pacific ocean	0.090909

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN polymetallic nodule	0.500000
polymetallic nodule	0.500000
LOWER IN depth 8-10cm	0.500000
depth (water) 4000m	0.333333
depth 0-5cm	0.333333
sediment depth 8-10cm	0.333333
LOWER IN sediment depth 0-5cm	0.250000
LOWER IN marine sediment	0.142857
marine sediment	0.052632
pacific ocean	0.047619

Fraction of annotations for the query sequences containing the term

Term	Score
pacific ocean	1.000000
depth (water) 4000m	1.000000
marine sediment	0.833333
polymetallic nodule	0.500000
LOWER IN polymetallic nodule	0.166667
LOWER IN marine sediment	0.166667
depth 0-5cm	0.166667
LOWER IN depth 8-10cm	0.166667
sediment depth 8-10cm	0.166667
LOWER IN sediment depth 0-5cm	0.166667

Number of experiments associating the term to the sequence

Term	Score
marine sediment	1.000000
LOWER IN polymetallic nodule	1.000000
pacific ocean	1.000000
depth (water) 4000m	1.000000
polymetallic nodule	1.000000
LOWER IN marine sediment	1.000000
depth 0-5cm	1.000000
LOWER IN depth 8-10cm	1.000000
sediment depth 8-10cm	1.000000
LOWER IN sediment depth 0-5cm	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
139	amnon	dominant marine sediment, polymetallic nodule, pacific ocean, depth (water) 4000m	2017-04-18	v4	1 / 12	approved	No
139	amnon	positively correlated with sediment depth (in ocean floor depth 4000m) ( high in sediment depth 8-10cm compared to sediment depth 0-5cm in marine sediment pacific ocean depth (water) 4000m )	2017-04-18	v4	1 / 522	approved	No
139	amnon	negatively correlated with sediment depth (in ocean floor depth 4000m) ( high in depth 0-5cm compared to depth 8-10cm in marine sediment pacific ocean depth (water) 4000m )	2017-04-18	v4	1 / 565	approved	No
139	amnon	common marine sediment, polymetallic nodule, pacific ocean, depth (water) 4000m	2017-04-18	v4	1 / 1196	approved	No
139	amnon	high in polymetallic nodule compared to marine sediment in pacific ocean depth (water) 4000m	2017-04-18	v4	1 / 1483	approved	No
139	amnon	high in marine sediment compared to polymetallic nodule in pacific ocean depth (water) 4000m	2017-04-18	v4	1 / 2686	approved	No

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