Experiment ID: 188

Field Description
namechemical and pathogen-induced inflammation disrupt the murine intestinal microbiome
srasrp114866
sraprjna348350
datamd5ef75fbc7ee4fece952696f5afa024002
mapmd5961849624a9532aa91b46d31ad122328

Annotations for experiment:

term enrichment score
TermScore
cba/caj0.500000
taconic farms0.333333
LOWER IN dextran sulfate sodium0.333333
LOWER IN dss0.333333
cba/j mice0.333333
pathogen0.105263
mouse0.029703
mus musculus0.026906
female0.024691
research facility0.010453
control0.008929
united states of america0.006623
feces0.004615
Fraction of dbbact annotations with this term covered by the query
TermScore
cba/caj0.500000
LOWER IN dextran sulfate sodium0.500000
LOWER IN dss0.500000
cba/j mice0.500000
taconic farms0.250000
pathogen0.066667
mouse0.015152
mus musculus0.013699
female0.012658
research facility0.005263
control0.004545
united states of america0.003356
feces0.002315
Fraction of annotations for the query sequences containing the term
TermScore
feces0.750000
research facility0.750000
mus musculus0.750000
mouse0.750000
female0.500000
cba/caj0.500000
taconic farms0.500000
control0.250000
LOWER IN dextran sulfate sodium0.250000
LOWER IN dss0.250000
united states of america0.250000
cba/j mice0.250000
pathogen0.250000
Number of experiments associating the term to the sequence
TermScore
feces1.000000
female1.000000
research facility1.000000
mus musculus1.000000
cba/caj1.000000
mouse1.000000
taconic farms1.000000
control1.000000
LOWER IN dextran sulfate sodium1.000000
LOWER IN dss1.000000
united states of america1.000000
cba/j mice1.000000
pathogen1.000000

Problems / suggestions? Please visit the dbBact forum