Experiment ID: 219

Field Description
namemodeling environmental risk factors of autism in mice induces ibd-related gut microbial dysbiosis and hyperserotonemia
sraerp016282
sraprjeb14629
datamd5b257e2a4bb11654c163deb54be79bb79
mapmd555cca705d46030f544905550d6af0775

Annotations for experiment:

term enrichment score
TermScore
autism spectrum disorder0.333333
LOWER IN autism spectrum disorder0.333333
age 28 days0.200000
LOWER IN age 21 days0.200000
LOWER IN pre-weaning0.200000
valproic acid0.200000
LOWER IN age 28 days0.200000
poly ic0.200000
LOWER IN poly ic0.200000
LOWER IN valproic acid0.200000
post-weaning0.181818
age 21 days0.181818
breast milk0.142857
south korea0.105263
age0.080000
c57bl/60.080000
LOWER IN mouse chow0.080000
male0.038961
mouse0.029851
mus musculus0.027027
female0.024096
research facility0.010471
LOWER IN control0.009132
control0.008929
feces0.004640
Fraction of dbbact annotations with this term covered by the query
TermScore
age 28 days0.500000
LOWER IN age 21 days0.500000
LOWER IN pre-weaning0.500000
valproic acid0.500000
autism spectrum disorder0.500000
LOWER IN age 28 days0.500000
poly ic0.500000
LOWER IN poly ic0.500000
LOWER IN autism spectrum disorder0.500000
LOWER IN valproic acid0.500000
post-weaning0.333333
age 21 days0.333333
breast milk0.166667
LOWER IN mouse chow0.058824
south korea0.055556
age0.047619
c57bl/60.041667
male0.020000
mouse0.015152
mus musculus0.013699
female0.012658
research facility0.005263
LOWER IN control0.004651
control0.004545
feces0.002326
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
research facility1.000000
mus musculus1.000000
c57bl/61.000000
mouse1.000000
south korea1.000000
male0.750000
age0.250000
female0.250000
autism spectrum disorder0.250000
LOWER IN control0.250000
control0.250000
LOWER IN autism spectrum disorder0.250000
age 28 days0.125000
post-weaning0.125000
LOWER IN age 21 days0.125000
LOWER IN pre-weaning0.125000
valproic acid0.125000
breast milk0.125000
age 21 days0.125000
LOWER IN mouse chow0.125000
LOWER IN age 28 days0.125000
poly ic0.125000
LOWER IN poly ic0.125000
LOWER IN valproic acid0.125000
Number of experiments associating the term to the sequence
TermScore
age1.000000
age 28 days1.000000
post-weaning1.000000
LOWER IN age 21 days1.000000
LOWER IN pre-weaning1.000000
feces1.000000
research facility1.000000
mus musculus1.000000
c57bl/61.000000
male1.000000
mouse1.000000
south korea1.000000
female1.000000
valproic acid1.000000
autism spectrum disorder1.000000
LOWER IN control1.000000
breast milk1.000000
age 21 days1.000000
LOWER IN mouse chow1.000000
LOWER IN age 28 days1.000000
poly ic1.000000
control1.000000
LOWER IN poly ic1.000000
LOWER IN autism spectrum disorder1.000000
LOWER IN valproic acid1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
219amnonhigher in controls compared to ASD mice (following mother VPA treatment) ( high in control compared to valproic acid autism spectrum disorder in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v41 / 15approvedNo
219amnonhigh freq. in mother mice feces (dominant feces, female, research facility, mus musculus, c57bl/6, mouse, south korea)2017-10-24v41 / 22approvedNo
219amnonhigher in controls compared toASD mice (following mother poly IC treatment) ( high in control compared to poly ic autism spectrum disorder in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v41 / 31approvedNo
219amnonhigher in pre-weaning compared to post-weaning in mouse feces ( high in breast milk age age 21 days compared to mouse chow age 28 days in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v41 / 36approvedNo
219amnonlower in controls compared to ASD mice (following mother poly IC treatment) ( high in poly ic autism spectrum disorder compared to control in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v41 / 36approvedNo
219amnonlower in controls compared to ASD mice (following mother VPA treatment) ( high in valproic acid autism spectrum disorder compared to control in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v41 / 37approvedNo
219amnoncommon in mother mice feces (common feces, female, research facility, mus musculus, c57bl/6, mouse, south korea)2017-10-24v41 / 250approvedNo
219amnonlower in pre-weaning compared to post-weaning in mouse feces ( high in age age 28 days post-weaning compared to age 21 days pre-weaning in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v41 / 299approvedNo

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