dbBact

Experiment ID: 233

Field	Description
name	early life dynamics of the human gut virome and bacterial microbiome in infants
sra	srp058399
datamd5	3e0b6d46f4fae5f1f9d545f2a6f2dd80
mapmd5	5da1062436a5313cc6faedced958ce66

Annotations for experiment:

term enrichment score

Term	Score
age < 3 months	0.500000
LOWER IN age > 3 months	0.400000
LOWER IN infant stage	0.400000
LOWER IN under-1-year-old human stage	0.166667
1-year-old human stage	0.117647
age	0.090909
infant	0.052632
united states of america	0.006689
homo sapiens	0.005291
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
age < 3 months	0.500000
LOWER IN age > 3 months	0.333333
LOWER IN infant stage	0.333333
LOWER IN under-1-year-old human stage	0.100000
1-year-old human stage	0.066667
age	0.047619
infant	0.027027
united states of america	0.003356
homo sapiens	0.002653
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
age	1.000000
feces	1.000000
homo sapiens	1.000000
united states of america	1.000000
infant	1.000000
1-year-old human stage	0.500000
LOWER IN under-1-year-old human stage	0.500000
age < 3 months	0.500000
LOWER IN age > 3 months	0.500000
LOWER IN infant stage	0.500000

Number of experiments associating the term to the sequence

Term	Score
age	1.000000
1-year-old human stage	1.000000
LOWER IN under-1-year-old human stage	1.000000
feces	1.000000
homo sapiens	1.000000
united states of america	1.000000
infant	1.000000
age < 3 months	1.000000
LOWER IN age > 3 months	1.000000
LOWER IN infant stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
233	amnon	high in age age < 3 months compared to age > 3 months infant stage in feces homo sapiens united states of america infant	2017-11-05	v4	1 / 31	approved	No
233	amnon	high in age 1-year-old human stage compared to under-1-year-old human stage in feces homo sapiens united states of america infant	2017-11-05	v4	1 / 37	approved	No

Problems / suggestions? Please visit the dbBact forum