Experiment ID: 266

Field Description
namehost genotype and age shape the leaf and root microbiomes of a wild perennial plant
sra prjeb10570
datamd56cd1304dd6ebcca9f30d99cce455f5d7
mapmd504f9b105e713231cb2389d4dd6e0cb5a

Annotations for experiment:

term enrichment score
TermScore
brassicaceae0.510638
state of idaho0.481928
boechera stricta0.465116
ph 5.50.228571
plant0.201681
ph 60.170213
ph 6.50.121212
root0.109375
fungal cell0.080000
leaf0.067416
LOWER IN leaf0.066667
LOWER IN root0.058824
pathogen0.052632
soil0.019361
united states of america0.006846
Fraction of dbbact annotations with this term covered by the query
TermScore
brassicaceae0.500000
boechera stricta0.500000
fungal cell0.500000
state of idaho0.333333
ph 5.50.333333
ph 6.50.200000
ph 60.166667
LOWER IN leaf0.142857
plant0.125000
LOWER IN root0.090909
root0.066667
pathogen0.066667
leaf0.045455
soil0.009901
united states of america0.003436
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.869565
state of idaho0.869565
plant0.521739
brassicaceae0.521739
boechera stricta0.434783
soil0.434783
root0.304348
ph 5.50.173913
ph 60.173913
leaf0.130435
ph 6.50.086957
LOWER IN leaf0.043478
LOWER IN root0.043478
fungal cell0.043478
pathogen0.043478
Number of experiments associating the term to the sequence
TermScore
root1.000000
LOWER IN leaf1.000000
united states of america1.000000
state of idaho1.000000
plant1.000000
brassicaceae1.000000
boechera stricta1.000000
soil1.000000
ph 5.51.000000
ph 61.000000
leaf1.000000
LOWER IN root1.000000
ph 6.51.000000
fungal cell1.000000
pathogen1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
266amnonplant mitochondria (other plant, brassicaceae)2017-12-18v41 / 1approvedNo
266amnonbrassicaceae fungal pathogen (other fungal cell, pathogen)2017-12-18v41 / 5approvedNo
266amnonhigh freq. in soil from JAM garden (dominant united states of america, soil, state of idaho, ph 5.5)2017-12-18v41 / 6approvedNo
266amnonhigh freq. in roots in SIL garden (dominant united states of america, state of idaho, plant, brassicaceae, boechera stricta, root)2017-12-19v41 / 6approvedNo
266amnonhigh freq. in soil from MIL garden (dominant united states of america, soil, state of idaho, ph 6.5)2017-12-18v41 / 8approvedNo
266amnonhigh freq. in soil from PAR garden (dominant united states of america, soil, state of idaho, ph 5.5)2017-12-18v41 / 8approvedNo
266amnonplant DNA (other plant, brassicaceae)2017-12-18v41 / 8approvedNo
266amnonhigh freq. in soil from SIL garden (dominant united states of america, soil, state of idaho, ph 6)2017-12-18v41 / 8approvedNo
266amnonhigh freq. in soil from MAH garden (dominant united states of america, soil, state of idaho, ph 6)2017-12-18v41 / 11approvedNo
266amnonhigh freq. in roots in JAM garden (dominant united states of america, state of idaho, plant, brassicaceae, boechera stricta, root)2017-12-19v41 / 12approvedNo
266amnonhigh freq. in roots in MAH garden (dominant united states of america, state of idaho, plant, brassicaceae, boechera stricta, root)2017-12-19v41 / 12approvedNo
266amnonhigh freq. on perennial plant leaves (dominant united states of america, leaf, state of idaho, plant, brassicaceae, boechera stricta)2017-12-19v41 / 17approvedNo
266amnoncommon on perennial plant leaves (common united states of america, leaf, state of idaho, plant, brassicaceae, boechera stricta)2017-12-19v41 / 156approvedNo
266amnoncommon in roots in JAM garden (common united states of america, state of idaho, plant, brassicaceae, boechera stricta, root)2017-12-19v41 / 843approvedNo
266amnoncommon in soil from MIL garden (common united states of america, soil, state of idaho, ph 6.5)2017-12-18v41 / 980approvedNo
266amnoncommon in soil from PAR garden (common united states of america, soil, state of idaho, ph 5.5)2017-12-18v41 / 1032approvedNo
266amnoncommon in roots in MAH garden (common united states of america, state of idaho, plant, brassicaceae, boechera stricta, root)2017-12-19v41 / 1110approvedNo
266amnon high in leaf compared to root in united states of america state of idaho plant brassicaceae boechera stricta 2017-12-19v41 / 1175approvedNo
266amnonCommon in soil from MAH garden (common united states of america, soil, state of idaho, ph 6)2017-12-18v41 / 1299approvedNo
266amnoncommon in soil from SIL garden (common united states of america, soil, state of idaho, ph 6)2017-12-18v41 / 1389approvedNo
266amnoncoomon in roots in SIL garden (common united states of america, state of idaho, plant, brassicaceae, boechera stricta, root)2017-12-19v41 / 1399approvedNo
266amnoncommon in soil from JAM garden (common united states of america, soil, state of idaho, ph 5.5)2017-12-18v41 / 1456approvedNo
266amnon high in root compared to leaf in united states of america state of idaho plant brassicaceae boechera stricta 2017-12-19v41 / 5886approvedNo

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