dbBact

Experiment ID: 273

Field	Description
name	maturation of the gut microbiome and risk of asthma in childhood
sra	prjna417357
datamd5	9cffe3a97a88f0b4185b4a6b8e243b26
mapmd5	c45fe9a770eb295ffaced3f4c4a32e53

Annotations for experiment:

term enrichment score

Term	Score
age one week	0.285714
LOWER IN 1-month-old human stage	0.214286
1-month-old human stage	0.212121
kingdom of denmark	0.166667
LOWER IN age one week	0.166667
age 1 week	0.125000
1-year-old human stage	0.109091
LOWER IN 1-year-old human stage	0.090909
age	0.085106
infant	0.052632
homo sapiens	0.005236
feces	0.004587

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN age one week	0.500000
age one week	0.500000
LOWER IN 1-month-old human stage	0.166667
age 1 week	0.166667
1-month-old human stage	0.125000
kingdom of denmark	0.090909
LOWER IN 1-year-old human stage	0.083333
1-year-old human stage	0.066667
age	0.047619
infant	0.027027
homo sapiens	0.002625
feces	0.002299

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
infant	1.000000
kingdom of denmark	1.000000
1-month-old human stage	0.700000
age	0.400000
1-year-old human stage	0.300000
LOWER IN 1-month-old human stage	0.300000
age one week	0.200000
LOWER IN 1-year-old human stage	0.100000
age 1 week	0.100000
LOWER IN age one week	0.100000

Number of experiments associating the term to the sequence

Term	Score
age	1.000000
1-year-old human stage	1.000000
LOWER IN 1-month-old human stage	1.000000
feces	1.000000
homo sapiens	1.000000
infant	1.000000
kingdom of denmark	1.000000
1-month-old human stage	1.000000
LOWER IN 1-year-old human stage	1.000000
age 1 week	1.000000
LOWER IN age one week	1.000000
age one week	1.000000

Search:

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
273	amnon	common feces, homo sapiens, infant, kingdom of denmark, 1-month-old human stage	2018-01-14	v4	1 / 16	approved	No
273	amnon	dominant feces, homo sapiens, infant, kingdom of denmark, 1-month-old human stage	2018-01-14	v4	1 / 18	approved	No
273	amnon	dominant feces, homo sapiens, infant, kingdom of denmark, age one week, 1-month-old human stage	2018-01-14	v4	1 / 20	approved	No
273	amnon	dominant feces, homo sapiens, infant, kingdom of denmark, 1-year-old human stage	2018-01-14	v4	1 / 20	approved	No
273	amnon	common feces, homo sapiens, infant, kingdom of denmark, age one week, 1-month-old human stage	2018-01-14	v4	1 / 20	approved	No
273	amnon	common feces, homo sapiens, infant, kingdom of denmark, 1-year-old human stage	2018-01-14	v4	1 / 46	approved	No
273	amnon	high in age 1-month-old human stage compared to age one week 1-month-old human stage in feces homo sapiens infant kingdom of denmark	2018-01-14	v4	1 / 107	approved	No
273	amnon	high in age age 1 week 1-month-old human stage compared to 1-month-old human stage in feces homo sapiens infant kingdom of denmark	2018-01-14	v4	1 / 127	approved	No
273	amnon	high in age 1-month-old human stage compared to 1-year-old human stage in feces homo sapiens infant kingdom of denmark	2018-01-14	v4	1 / 155	approved	No
273	amnon	high in age 1-year-old human stage compared to 1-month-old human stage in feces homo sapiens infant kingdom of denmark	2018-01-14	v4	1 / 557	approved	No

Showing 1 to 10 of 10 entries

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