dbBact

Experiment ID: 299

Field	Description
name	bacterial alterations in salivary microbiota and their association in oral cancer
sra	srp107079
datamd5	b1220e3c4e5e62b60a55e9daf6512a19
mapmd5	173a71acbae1a9b251816a432666c3bb

Annotations for experiment:

term enrichment score

Term	Score
mouth neoplasm	0.400000
cancer	0.333333
LOWER IN mouth neoplasm	0.222222
LOWER IN cancer	0.222222
saliva	0.030769
china	0.009524
LOWER IN control	0.009009
control	0.008969
adult	0.008264
homo sapiens	0.005277

Fraction of dbbact annotations with this term covered by the query

Term	Score
mouth neoplasm	0.333333
LOWER IN mouth neoplasm	0.333333
LOWER IN cancer	0.333333
cancer	0.250000
saliva	0.015625
china	0.004785
LOWER IN control	0.004630
control	0.004525
adult	0.004149
homo sapiens	0.002646

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
saliva	1.000000
adult	1.000000
china	1.000000
mouth neoplasm	0.500000
cancer	0.500000
control	0.500000
LOWER IN control	0.166667
LOWER IN mouth neoplasm	0.166667
LOWER IN cancer	0.166667

Number of experiments associating the term to the sequence

Term	Score
mouth neoplasm	1.000000
cancer	1.000000
LOWER IN control	1.000000
homo sapiens	1.000000
saliva	1.000000
adult	1.000000
china	1.000000
control	1.000000
LOWER IN mouth neoplasm	1.000000
LOWER IN cancer	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
299	amnon	dominant homo sapiens, saliva, adult, mouth neoplasm, cancer, china	2018-02-27	v4	1 / 19	approved	No
299	amnon	high freq. in healthy (non-tumor) controls (dominant homo sapiens, control, saliva, adult, china)	2018-02-27	v4	1 / 20	approved	No
299	amnon	high in control compared to mouth neoplasm cancer in homo sapiens saliva adult china	2018-02-27	v4	1 / 75	approved	No
299	amnon	common in healthy (non-tumor) controls (common homo sapiens, control, saliva, adult, china)	2018-02-27	v4	1 / 179	approved	No
299	amnon	common homo sapiens, saliva, adult, mouth neoplasm, cancer, china	2018-02-27	v4	1 / 188	approved	No
299	amnon	high in mouth neoplasm cancer compared to control in homo sapiens saliva adult china	2018-02-27	v4	1 / 319	approved	No

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