dbBact

Experiment ID: 306

Field	Description
name	microbiome dynamics during ensiling of corn with and without lactobacillus plantarum inoculant
sra	prjna415363
datamd5	329133d79c981f7a5ada087988381b64
mapmd5	9aa85d2bc7ae08774d7270528cb5007a

Annotations for experiment:

term enrichment score

Term	Score
zea mays subsp. mays	0.666667
whole plant	0.500000
corn	0.500000
fermented corn	0.444444
LOWER IN fresh corn	0.444444
fresh corn	0.285714
LOWER IN fermented corn	0.285714
days 2-30	0.285714
days 90	0.285714
day 0	0.250000
LOWER IN time 0	0.250000
LOWER IN day 0	0.250000
israel	0.095238

Fraction of dbbact annotations with this term covered by the query

Term	Score
zea mays subsp. mays	0.500000
fresh corn	0.500000
LOWER IN fermented corn	0.500000
fermented corn	0.500000
days 2-30	0.500000
LOWER IN fresh corn	0.500000
days 90	0.500000
whole plant	0.333333
corn	0.333333
day 0	0.333333
LOWER IN time 0	0.333333
LOWER IN day 0	0.333333
israel	0.050000

Fraction of annotations for the query sequences containing the term

Term	Score
zea mays subsp. mays	1.000000
whole plant	1.000000
israel	1.000000
corn	1.000000
fermented corn	0.400000
LOWER IN fresh corn	0.400000
fresh corn	0.200000
day 0	0.200000
LOWER IN fermented corn	0.200000
days 2-30	0.200000
LOWER IN time 0	0.200000
days 90	0.200000
LOWER IN day 0	0.200000

Number of experiments associating the term to the sequence

Term	Score
zea mays subsp. mays	1.000000
whole plant	1.000000
israel	1.000000
corn	1.000000
fresh corn	1.000000
day 0	1.000000
LOWER IN fermented corn	1.000000
fermented corn	1.000000
days 2-30	1.000000
LOWER IN fresh corn	1.000000
LOWER IN time 0	1.000000
days 90	1.000000
LOWER IN day 0	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
306	amnon	increases after 90 days of fermentation of insiled whole plant corn ( high in fermented corn days 90 compared to fresh corn day 0 in zea mays subsp. mays whole plant israel corn )	2018-03-19	v4	1 / 5	approved	No
306	amnon	high freq. at whole plant corn at time 0 (dominant zea mays subsp. mays, whole plant, israel, corn)	2018-03-19	v4	1 / 9	approved	No
306	amnon	increases after 2-30 days of fermentation of insiled whole plant corn ( high in fermented corn days 2-30 compared to fresh corn time 0 in zea mays subsp. mays whole plant israel corn )	2018-03-19	v4	1 / 19	approved	No
306	amnon	decreases after 2-30 days of fermentation of insiled whole plant corn ( high in fresh corn day 0 compared to fermented corn in zea mays subsp. mays whole plant israel corn )	2018-03-19	v4	1 / 45	approved	No
306	amnon	common at whole plant corn at time 0 (common zea mays subsp. mays, whole plant, israel, corn)	2018-03-19	v4	1 / 96	approved	No

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