Experiment ID: 313

Field Description
namedietary live yeast and increased water temperature influence the gut microbiota of rainbow trout
sraprjna408116
datamd5ac6ae316b34230ccb63f263dd67a73ca
mapmd5a2670ca1c83249c3f04c85b984301092

Annotations for experiment:

term enrichment score
TermScore
cold environment0.444444
gastrointestinal system mucosa0.444444
18c0.444444
12c0.400000
warm temperature habitat0.400000
oncorhynchus mykiss0.388060
rainbow trout0.388060
gut content0.307692
LOWER IN warm temperature habitat0.210526
LOWER IN 12c0.210526
LOWER IN cold environment0.210526
fish feed0.190476
sweden0.117647
temp 12c0.117647
LOWER IN temp 18c0.117647
LOWER IN 18c0.117647
warm termpterature habitat0.117647
LOWER IN yeast diet0.117647
fish0.116592
fishmeal diet0.111111
digestive system0.062201
research facility0.010518
Fraction of dbbact annotations with this term covered by the query
TermScore
temp 12c0.500000
cold environment0.500000
LOWER IN warm temperature habitat0.500000
LOWER IN temp 18c0.500000
12c0.500000
LOWER IN 18c0.500000
gastrointestinal system mucosa0.500000
warm temperature habitat0.500000
18c0.500000
warm termpterature habitat0.500000
LOWER IN 12c0.500000
LOWER IN cold environment0.500000
LOWER IN yeast diet0.500000
fish feed0.333333
fishmeal diet0.333333
oncorhynchus mykiss0.250000
rainbow trout0.250000
gut content0.250000
sweden0.062500
fish0.062500
digestive system0.032258
research facility0.005291
Fraction of annotations for the query sequences containing the term
TermScore
sweden1.000000
digestive system0.866667
research facility0.866667
oncorhynchus mykiss0.866667
fish0.866667
rainbow trout0.866667
cold environment0.400000
gut content0.400000
gastrointestinal system mucosa0.400000
18c0.400000
12c0.333333
warm temperature habitat0.333333
fish feed0.133333
LOWER IN warm temperature habitat0.133333
LOWER IN 12c0.133333
LOWER IN cold environment0.133333
temp 12c0.066667
LOWER IN temp 18c0.066667
LOWER IN 18c0.066667
warm termpterature habitat0.066667
fishmeal diet0.066667
LOWER IN yeast diet0.066667
Number of experiments associating the term to the sequence
TermScore
sweden1.000000
fish feed1.000000
temp 12c1.000000
cold environment1.000000
LOWER IN warm temperature habitat1.000000
LOWER IN temp 18c1.000000
digestive system1.000000
research facility1.000000
oncorhynchus mykiss1.000000
fish1.000000
rainbow trout1.000000
gut content1.000000
12c1.000000
LOWER IN 18c1.000000
gastrointestinal system mucosa1.000000
warm temperature habitat1.000000
18c1.000000
warm termpterature habitat1.000000
LOWER IN 12c1.000000
LOWER IN cold environment1.000000
fishmeal diet1.000000
LOWER IN yeast diet1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
313amnon high in fishmeal diet compared to yeast diet in digestive system research facility oncorhynchus mykiss sweden fish rainbow trout 2018-04-10v41 / 2approvedNo
313amnonlower in gut mucosa of fish grown in 12C compared to 18C water ( high in 18c warm termpterature habitat compared to 12c cold environment in digestive system research facility gastrointestinal system mucosa oncorhynchus mykiss sweden fish rainbow trout )2018-04-10v41 / 3approvedNo
313amnonlower in gut content of fish grown in 12C compared to 18C water ( high in warm temperature habitat 18c compared to 12c cold environment in digestive system research facility oncorhynchus mykiss sweden fish rainbow trout gut content )2018-04-10v41 / 3approvedNo
313amnonhigh freq. in rainbow trout gut content grown in 18C water (dominant digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, warm temperature habitat, 18c)2018-04-10v41 / 5approvedNo
313amnonhigh freq. in rainbow trout gut mucosa grown in 18C water (dominant digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, warm temperature habitat, 18c)2018-04-10v41 / 5approvedNo
313amnonhigh freq. in rainbow trout gut mucosa grown in 12C water (dominant digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, 12c, cold environment)2018-04-10v41 / 6approvedNo
313amnoncommon in rainbow trout gut mucosa grown in 18C water (common digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, warm temperature habitat, 18c)2018-04-10v41 / 8approvedNo
313amnoncommon in rainbow trout gut content grown in 18C water (common digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, warm temperature habitat, 18c)2018-04-10v41 / 9approvedNo
313amnonhigh freq. in rainbow trout gut content grown in 12C water (dominant digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, 12c, cold environment)2018-04-10v41 / 10approvedNo
313amnoncommon in rainbow trout gut mucosa grown in 12C water (common digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, 12c, cold environment)2018-04-10v41 / 13approvedNo
313amnonhigh freq. in fishfeed (dominant sweden, fish feed)2018-04-10v41 / 14approvedNo
313amnonhigher in gut mucosa of fish grown in 12C compared to 18C water ( high in 12c cold environment compared to warm temperature habitat 18c in digestive system research facility gastrointestinal system mucosa oncorhynchus mykiss sweden fish rainbow trout )2018-04-10v41 / 15approvedNo
313amnoncommon in rainbow trout gut content grown in 12C water (common digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, 12c, cold environment)2018-04-10v41 / 31approvedNo
313amnonhigher in gut content of fish grown in 12C compared to 18C water ( high in temp 12c cold environment compared to warm temperature habitat temp 18c in digestive system research facility oncorhynchus mykiss sweden fish rainbow trout gut content )2018-04-10v41 / 55approvedNo
313amnoncommon in fishfeed (common sweden, fish feed)2018-04-10v41 / 71approvedNo

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