dbBact

Experiment ID: 34

Field	Description
name	bacterial communities in the rhizospheres of three mangrove tree species from beilun estuary, china
sra	srp081285
sra	prjna338246
datamd5	9d4890514ba48c352406c5eee962710c
mapmd5	f4b14b020e5c43750ea150cb1375c039

Annotations for experiment:

term enrichment score

Term	Score
mangrove swamp	0.333333
LOWER IN 10 cm depth	0.333333
LOWER IN 20 cm depth	0.333333
20 cm depth	0.333333
LOWER IN topsoil	0.333333
10 cm depth	0.285714
topsoil	0.153846
rhizosphere	0.038462
china	0.009524

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN 10 cm depth	0.500000
LOWER IN 20 cm depth	0.500000
20 cm depth	0.500000
LOWER IN topsoil	0.500000
10 cm depth	0.333333
mangrove swamp	0.200000
topsoil	0.111111
rhizosphere	0.019608
china	0.004785

Fraction of annotations for the query sequences containing the term

Term	Score
mangrove swamp	1.000000
rhizosphere	1.000000
china	1.000000
topsoil	0.250000
LOWER IN 10 cm depth	0.250000
LOWER IN 20 cm depth	0.250000
10 cm depth	0.250000
20 cm depth	0.250000
LOWER IN topsoil	0.250000

Number of experiments associating the term to the sequence

Term	Score
mangrove swamp	1.000000
rhizosphere	1.000000
china	1.000000
topsoil	1.000000
LOWER IN 10 cm depth	1.000000
LOWER IN 20 cm depth	1.000000
10 cm depth	1.000000
20 cm depth	1.000000
LOWER IN topsoil	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
34	amnon	high freq. in mangrove rhizosphere (dominant mangrove swamp, rhizosphere, china)	2016-12-06	v4	1 / 6	approved	No
34	amnon	higher in 10cm, 20cm depth compared to 0cm ( high in 10 cm depth 20 cm depth compared to topsoil in mangrove swamp rhizosphere china )	2016-12-06	v4	1 / 75	approved	No
34	amnon	higher in 0cm depth compared to 10cm, 20cm depth ( high in topsoil compared to 10 cm depth 20 cm depth in mangrove swamp rhizosphere china )	2016-12-06	v4	1 / 106	approved	No
34	amnon	common in mangrove rhizosphere (common mangrove swamp, rhizosphere, china)	2016-12-06	v4	1 / 1473	approved	No

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