Experiment ID: 344

Field Description
namefecal microbiota composition drives immune activation in hiv-infected individuals
sraerp107331
qiita11669
datamd5efa1c629f6e01e4e940891da97e78f24
mapmd505dae389291080621e410c030534fd4a

Annotations for experiment:

term enrichment score
TermScore
denver0.666667
gay0.357143
heterosexual0.260870
msw0.260870
homosexual0.208333
msm0.208333
state of colorado0.181818
LOWER IN gay0.166667
LOWER IN heterosexual0.153846
LOWER IN msw0.153846
LOWER IN homosexual0.153846
LOWER IN msm0.153846
LOWER IN hiv infection0.117647
hiv infection0.105263
LOWER IN control0.009174
control0.008969
united states of america0.006849
homo sapiens0.005525
feces0.004773
Fraction of dbbact annotations with this term covered by the query
TermScore
denver0.500000
gay0.250000
LOWER IN gay0.250000
LOWER IN heterosexual0.200000
LOWER IN msw0.200000
heterosexual0.200000
msw0.200000
LOWER IN homosexual0.200000
LOWER IN msm0.200000
homosexual0.125000
msm0.125000
LOWER IN hiv infection0.111111
state of colorado0.100000
hiv infection0.090909
LOWER IN control0.004762
control0.004651
united states of america0.003436
homo sapiens0.002770
feces0.002392
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
united states of america1.000000
state of colorado1.000000
denver1.000000
gay0.625000
homosexual0.625000
msm0.625000
heterosexual0.375000
msw0.375000
LOWER IN heterosexual0.125000
LOWER IN msw0.125000
LOWER IN gay0.125000
LOWER IN homosexual0.125000
LOWER IN msm0.125000
hiv infection0.125000
LOWER IN control0.125000
control0.125000
LOWER IN hiv infection0.125000
Number of experiments associating the term to the sequence
TermScore
gay1.000000
homosexual1.000000
msm1.000000
LOWER IN heterosexual1.000000
LOWER IN msw1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
state of colorado1.000000
denver1.000000
heterosexual1.000000
msw1.000000
LOWER IN gay1.000000
LOWER IN homosexual1.000000
LOWER IN msm1.000000
hiv infection1.000000
LOWER IN control1.000000
control1.000000
LOWER IN hiv infection1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
344amnon high in control compared to hiv infection in feces homo sapiens united states of america state of colorado denver gay homosexual msm 2018-05-31v41 / 2approvedNo
344amnon high in hiv infection compared to control in feces homo sapiens united states of america state of colorado denver gay homosexual msm 2018-05-31v41 / 6approvedNo
344amnonhigh freq. in feces of homosexual males (dominant feces, homo sapiens, united states of america, state of colorado, denver, gay, homosexual, msm)2018-05-31v41 / 20approvedNo
344amnonhigh freq. in feces of heterosexuals (dominant feces, homo sapiens, united states of america, state of colorado, denver, heterosexual, msw)2018-05-31v41 / 23approvedNo
344amnoncommon in feces of heterosexuals (common feces, homo sapiens, united states of america, state of colorado, denver, heterosexual, msw)2018-05-31v41 / 82approvedNo
344amnoncommon in feces of homosexual males (common feces, homo sapiens, united states of america, state of colorado, denver, gay, homosexual, msm)2018-05-31v41 / 87approvedNo
344amnonlower in gay (msm) individuals compared to heterosexual (msw) ( high in heterosexual msw compared to gay homosexual msm in feces homo sapiens united states of america state of colorado denver )2018-05-31v41 / 106approvedNo
344amnonhigher in gay (msm) individuals compared to heterosexual (msw) ( high in gay homosexual msm compared to heterosexual msw in feces homo sapiens united states of america state of colorado denver )2018-05-31v41 / 124approvedNo

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