Experiment ID: 353

Field Description
namecaptivity and exposure to the emerging fungal pathogen batrachochytrium salamandrivorans are linked to perturbation and dysbiosis of the amphibian skin microbiome
sraprjna430498
datamd5e88334c1f5c0526b2a44d6289ed2c646
mapmd503b27b2b38764b30a0b8cd830ecb7012

Annotations for experiment:

term enrichment score
TermScore
cambridgeshire0.666667
newt0.500000
lissotriton vulgaris0.500000
triturus cristatus0.500000
LOWER IN research facility0.153846
united kingdom0.125000
LOWER IN wild0.100000
wild0.047619
skin0.047619
research facility0.010695
adult0.008658
Fraction of dbbact annotations with this term covered by the query
TermScore
cambridgeshire0.500000
lissotriton vulgaris0.500000
triturus cristatus0.500000
newt0.333333
LOWER IN research facility0.142857
LOWER IN wild0.071429
united kingdom0.066667
wild0.027778
skin0.024390
research facility0.005405
adult0.004348
Fraction of annotations for the query sequences containing the term
TermScore
skin1.000000
adult1.000000
cambridgeshire1.000000
newt1.000000
united kingdom1.000000
lissotriton vulgaris0.500000
triturus cristatus0.500000
research facility0.500000
wild0.166667
LOWER IN research facility0.166667
LOWER IN wild0.166667
Number of experiments associating the term to the sequence
TermScore
wild1.000000
LOWER IN research facility1.000000
skin1.000000
adult1.000000
cambridgeshire1.000000
newt1.000000
lissotriton vulgaris1.000000
united kingdom1.000000
triturus cristatus1.000000
research facility1.000000
LOWER IN wild1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
353amnonhigh freq. in wild Lissotriton vulgaris newts skin (dominant skin, adult, cambridgeshire, newt, lissotriton vulgaris, united kingdom)2018-07-30v41 / 10approvedNo
353amnonhigh freq. in wild Triturus cristatus newts skin (dominant skin, adult, cambridgeshire, newt, triturus cristatus, united kingdom)2018-07-30v41 / 10approvedNo
353amnonhigh freq. in captive Triturus cristatus newts skin (dominant research facility, skin, adult, cambridgeshire, newt, triturus cristatus, united kingdom)2018-07-30v41 / 17approvedNo
353amnonhigh freq. in captive Lissotriton vulgaris newts skin (dominant research facility, skin, adult, cambridgeshire, newt, lissotriton vulgaris, united kingdom)2018-07-30v41 / 20approvedNo
353amnoncommon in captive Triturus cristatus newts skin (common research facility, skin, adult, cambridgeshire, newt, triturus cristatus, united kingdom)2018-07-30v41 / 84approvedNo
353amnoncommon in captive Lissotriton vulgaris newts skin (common research facility, skin, adult, cambridgeshire, newt, lissotriton vulgaris, united kingdom)2018-07-30v41 / 86approvedNo
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in skin adult cambridgeshire newt lissotriton vulgaris united kingdom )2018-07-30v41 / 110approvedNo
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in skin adult cambridgeshire newt triturus cristatus united kingdom )2018-07-30v41 / 135approvedNo
353amnoncommon in wild Lissotriton vulgaris newts skin (common skin, adult, cambridgeshire, newt, lissotriton vulgaris, united kingdom)2018-07-30v41 / 418approvedNo
353amnoncommon in wild Triturus cristatus newts skin (common skin, adult, cambridgeshire, newt, triturus cristatus, united kingdom)2018-07-30v41 / 456approvedNo
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in skin adult cambridgeshire newt triturus cristatus united kingdom )2018-07-30v41 / 1834approvedNo
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in skin adult cambridgeshire newt lissotriton vulgaris united kingdom )2018-07-30v41 / 2162approvedNo

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