Experiment ID: 354

Field Description
namebacterial biogeography of adult airways in atopic asthma
sraprjeb15534
sraprjeb22676
datamd597a7ad79c11391be97c8a25c415b407c
mapmd55e5b3e77f3eba62760c068eae94e67b9

Annotations for experiment:

term enrichment score
TermScore
bronchial brush0.363636
induced sputum0.363636
bronchus0.307692
bronchial epithelium0.235294
LOWER IN sputum0.222222
LOWER IN induced sputum0.222222
LOWER IN bronchus0.222222
LOWER IN bronchial epithelium0.222222
LOWER IN bronchial brush0.222222
nasal brush0.222222
sputum0.210526
LOWER IN oral wash0.181818
oral wash0.173913
nasal cavity0.095238
pair of nares0.095238
LOWER IN saliva0.074074
saliva0.031496
adult0.008621
united states of america0.006826
homo sapiens0.005510
Fraction of dbbact annotations with this term covered by the query
TermScore
bronchial brush0.500000
induced sputum0.500000
LOWER IN sputum0.500000
LOWER IN induced sputum0.500000
LOWER IN bronchus0.500000
LOWER IN bronchial epithelium0.500000
LOWER IN bronchial brush0.500000
nasal brush0.500000
bronchus0.333333
LOWER IN oral wash0.250000
bronchial epithelium0.200000
sputum0.166667
oral wash0.125000
nasal cavity0.071429
pair of nares0.071429
LOWER IN saliva0.050000
saliva0.016667
adult0.004329
united states of america0.003425
homo sapiens0.002762
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
adult1.000000
bronchus0.285714
bronchial epithelium0.285714
bronchial brush0.285714
sputum0.285714
induced sputum0.285714
saliva0.285714
oral wash0.285714
LOWER IN saliva0.142857
LOWER IN oral wash0.142857
LOWER IN sputum0.142857
LOWER IN induced sputum0.142857
LOWER IN bronchus0.142857
LOWER IN bronchial epithelium0.142857
LOWER IN bronchial brush0.142857
nasal cavity0.142857
pair of nares0.142857
nasal brush0.142857
Number of experiments associating the term to the sequence
TermScore
bronchus1.000000
bronchial epithelium1.000000
bronchial brush1.000000
LOWER IN saliva1.000000
LOWER IN oral wash1.000000
homo sapiens1.000000
united states of america1.000000
adult1.000000
sputum1.000000
induced sputum1.000000
LOWER IN sputum1.000000
LOWER IN induced sputum1.000000
saliva1.000000
oral wash1.000000
LOWER IN bronchus1.000000
LOWER IN bronchial epithelium1.000000
LOWER IN bronchial brush1.000000
nasal cavity1.000000
pair of nares1.000000
nasal brush1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
354amnon high in saliva oral wash compared to sputum induced sputum in homo sapiens united states of america adult 2018-07-30v41 / 7approvedNo
354amnondominant homo sapiens, united states of america, nasal cavity, pair of nares, adult, nasal brush2018-07-30v41 / 10approvedNo
354amnondominant homo sapiens, sputum, united states of america, adult, induced sputum2018-07-30v41 / 11approvedNo
354amnondominant homo sapiens, united states of america, saliva, adult, oral wash2018-07-30v41 / 12approvedNo
354amnondominant homo sapiens, united states of america, bronchus, bronchial epithelium, adult, bronchial brush2018-07-30v41 / 15approvedNo
354amnon high in sputum induced sputum compared to saliva oral wash in homo sapiens united states of america adult 2018-07-30v41 / 24approvedNo
354amnoncommon homo sapiens, united states of america, nasal cavity, pair of nares, adult, nasal brush2018-07-30v41 / 26approvedNo
354amnon high in sputum induced sputum compared to bronchus bronchial epithelium bronchial brush in homo sapiens united states of america adult 2018-07-30v41 / 32approvedNo
354amnon high in saliva oral wash compared to bronchus bronchial epithelium bronchial brush in homo sapiens united states of america adult 2018-07-30v41 / 33approvedNo
354amnoncommon homo sapiens, united states of america, saliva, adult, oral wash2018-07-30v41 / 52approvedNo
354amnon high in bronchus bronchial epithelium bronchial brush compared to sputum induced sputum in homo sapiens united states of america adult 2018-07-30v41 / 55approvedNo
354amnoncommon homo sapiens, sputum, united states of america, adult, induced sputum2018-07-30v41 / 63approvedNo
354amnoncommon homo sapiens, united states of america, bronchus, bronchial epithelium, adult, bronchial brush2018-07-30v41 / 65approvedNo
354amnon high in bronchus bronchial epithelium bronchial brush compared to saliva oral wash in homo sapiens united states of america adult 2018-07-30v41 / 94approvedNo

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